RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 IGFL1Q6UW32 110 aa3.63□□□□□ -1.83
DEPDC4-209ENST00000550587 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
DEPDC4-209ENST00000550587 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 IGLV9-49A0A0B4J1Y8 123 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A1W2PNM2 257 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 CRYGAP11844 174 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 Q6Q795 121 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 Q8NBF4 154 aa3.61□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A087X002 238 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 C9orf153Q5TBE3 101 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 VPS25Q9BRG1 176 aa3.6□□□□□ -1.83
DEPDC4-209ENST00000550587 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 CD164Q04900 197 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 MOBPQ13875 183 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 PRR4Q16378 134 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 LINC00846Q9NV44 126 aa3.59□□□□□ -1.83
DEPDC4-209ENST00000550587 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
DEPDC4-209ENST00000550587 LRP2P98164 4655 aa3.58□□□□□ -1.84
DEPDC4-209ENST00000550587 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
DEPDC4-209ENST00000550587 TYMSOSQ8TAI1 123 aa3.57□□□□□ -1.84
DEPDC4-209ENST00000550587 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
DEPDC4-209ENST00000550587 NREPQ16612 68 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 LINC00643Q86TS7 51 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
DEPDC4-209ENST00000550587 A0A087WSZ3 146 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 SPAG11AQ6PDA7 123 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 Q6ZVQ6 151 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 MPLKIPQ8TAP9 179 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
DEPDC4-209ENST00000550587 SPINK1P00995 79 aa3.54□□□□□ -1.84
DEPDC4-209ENST00000550587 Q5XG85 94 aa3.54□□□□□ -1.84
DEPDC4-209ENST00000550587 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
DEPDC4-209ENST00000550587 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 ATP5EP2Q5VTU8 51 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 SIGMAR1Q99720 223 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
DEPDC4-209ENST00000550587 MT-ATP8P03928 68 aa3.52□□□□□ -1.85
DEPDC4-209ENST00000550587 CXCL6P80162 114 aa3.52□□□□□ -1.85
DEPDC4-209ENST00000550587 TNXBP22105 4242 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 J3KT08 172 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 BPY2O14599 106 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 Q96NJ1 140 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 LIMD2Q9BT23 127 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
DEPDC4-209ENST00000550587 IGKV3D-7A0A0C4DH55 119 aa3.5□□□□□ -1.85
DEPDC4-209ENST00000550587 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
DEPDC4-209ENST00000550587 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
DEPDC4-209ENST00000550587 MT3P25713 68 aa3.49□□□□□ -1.85
DEPDC4-209ENST00000550587 DSCR10P59022 87 aa3.49□□□□□ -1.85
DEPDC4-209ENST00000550587 DEFB116Q30KQ4 102 aa3.49□□□□□ -1.85
DEPDC4-209ENST00000550587 IGKV4-1P06312 121 aa3.48□□□□□ -1.85
DEPDC4-209ENST00000550587 C1orf195Q5TG92 126 aa3.48□□□□□ -1.85
DEPDC4-209ENST00000550587 A8MWP4 228 aa3.47□□□□□ -1.85
DEPDC4-209ENST00000550587 NDUFB1O75438 58 aa3.47□□□□□ -1.85
DEPDC4-209ENST00000550587 HIST1H4AP62805 103 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-209ENST00000550587 PRR15Q8IV56 129 aa3.46□□□□□ -1.86
DEPDC4-209ENST00000550587 Q8N9L7 120 aa3.45□□□□□ -1.86
DEPDC4-209ENST00000550587 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
DEPDC4-209ENST00000550587 IGLV7-46A0A075B6I9 117 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 K7EQZ3 153 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 SCGB1A1P11684 91 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
DEPDC4-209ENST00000550587 A0A087WVE0 104 aa3.43□□□□□ -1.86
DEPDC4-209ENST00000550587 LPAP08519 4548 aa3.42□□□□□ -1.86
DEPDC4-209ENST00000550587 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
DEPDC4-209ENST00000550587 HCG22E2RYF7 251 aa3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 C8orf87E5RJ46 101 aa3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 FP248Q71RG6 208 aaPredicted RBP3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 C8orf17Q9NRJ1 99 aa3.41□□□□□ -1.86
DEPDC4-209ENST00000550587 MMP24-AS1A0A0U1RRL7 71 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 FAM236AA0A1B0GUQ0 79 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 FAM236BA0A1B0GV22 79 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 LINC00313P59037 77 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 CASC2Q6XLA1 102 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
DEPDC4-209ENST00000550587 hDV103S1A0JD37 113 aa3.39□□□□□ -1.87
DEPDC4-209ENST00000550587 PCP4P48539 62 aa3.39□□□□□ -1.87
DEPDC4-209ENST00000550587 TMEM254Q8TBM7 123 aa3.39□□□□□ -1.87
DEPDC4-209ENST00000550587 ATOX1O00244 68 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 SEC61BP60468 96 aaKnown RBP3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 SMIM20Q8N5G0 67 aa3.38□□□□□ -1.87
DEPDC4-209ENST00000550587 MRPL34Q9BQ48 92 aaKnown RBP3.37□□□□□ -1.87
DEPDC4-209ENST00000550587 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
DEPDC4-209ENST00000550587 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
DEPDC4-209ENST00000550587 TRAV7A0A075B6U4 112 aa3.35□□□□□ -1.87
DEPDC4-209ENST00000550587 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
DEPDC4-209ENST00000550587 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
DEPDC4-209ENST00000550587 C9orf92A6NGG3 77 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms