RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 A0A0D9SG42 100 aa8.84□□□□□ -0.99
GCFC2-211ENST00000541687 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
GCFC2-211ENST00000541687 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -1
GCFC2-211ENST00000541687 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
GCFC2-211ENST00000541687 CRIPTQ9P021 101 aa8.82□□□□□ -1
GCFC2-211ENST00000541687 Q1T7F1 81 aa8.81□□□□□ -1
GCFC2-211ENST00000541687 SPRR1BP22528 89 aa8.8□□□□□ -1
GCFC2-211ENST00000541687 LINC01554Q52M75 96 aa8.78□□□□□ -1
GCFC2-211ENST00000541687 TRRAPQ9Y4A5 3859 aa8.76□□□□□ -1.01
GCFC2-211ENST00000541687 Q8N9P0 234 aaPredicted RBP8.76□□□□□ -1.01
GCFC2-211ENST00000541687 IGLV7-46A0A075B6I9 117 aa8.73□□□□□ -1.01
GCFC2-211ENST00000541687 PRAC1Q96KF2 57 aa8.73□□□□□ -1.01
GCFC2-211ENST00000541687 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
GCFC2-211ENST00000541687 PLAC8Q9NZF1 115 aa8.72□□□□□ -1.01
GCFC2-211ENST00000541687 HRES1P13985 223 aa8.72□□□□□ -1.01
GCFC2-211ENST00000541687 TENM2Q9NT68 2774 aa8.7□□□□□ -1.02
GCFC2-211ENST00000541687 SRRM2Q9UQ35 2752 aaKnown RBP8.69□□□□□ -1.02
GCFC2-211ENST00000541687 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
GCFC2-211ENST00000541687 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
GCFC2-211ENST00000541687 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
GCFC2-211ENST00000541687 A0A087X002 238 aa8.65□□□□□ -1.02
GCFC2-211ENST00000541687 NOTCH2NLQ7Z3S9 236 aa8.65□□□□□ -1.02
GCFC2-211ENST00000541687 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
GCFC2-211ENST00000541687 Q75L30 129 aa8.64□□□□□ -1.03
GCFC2-211ENST00000541687 Q5VV11 94 aa8.64□□□□□ -1.03
GCFC2-211ENST00000541687 SPINK7P58062 85 aa8.62□□□□□ -1.03
GCFC2-211ENST00000541687 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
GCFC2-211ENST00000541687 LINC01558Q9Y6Z2 57 aa8.6□□□□□ -1.03
GCFC2-211ENST00000541687 A0A1B0GU33 70 aa8.6□□□□□ -1.03
GCFC2-211ENST00000541687 TGP01266 2768 aa8.58□□□□□ -1.04
GCFC2-211ENST00000541687 J3QL48 77 aa8.56□□□□□ -1.04
GCFC2-211ENST00000541687 LINC00483Q53H64 154 aa8.56□□□□□ -1.04
GCFC2-211ENST00000541687 KRTAP10-1P60331 282 aa8.56□□□□□ -1.04
GCFC2-211ENST00000541687 Q5W150 140 aa8.54□□□□□ -1.04
GCFC2-211ENST00000541687 ANK2Q01484 3957 aa8.54□□□□□ -1.04
GCFC2-211ENST00000541687 Q6ZR54 194 aa8.54□□□□□ -1.04
GCFC2-211ENST00000541687 LCE6AA0A183 80 aa8.53□□□□□ -1.04
GCFC2-211ENST00000541687 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
GCFC2-211ENST00000541687 KRTAP13-1Q8IUC0 172 aa8.5□□□□□ -1.05
GCFC2-211ENST00000541687 H3BS24 57 aa8.48□□□□□ -1.05
GCFC2-211ENST00000541687 A8MU10 97 aa8.45□□□□□ -1.06
GCFC2-211ENST00000541687 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
GCFC2-211ENST00000541687 CMYA5Q8N3K9 4069 aa8.41□□□□□ -1.06
GCFC2-211ENST00000541687 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
GCFC2-211ENST00000541687 Q6ZSA8 131 aa8.37□□□□□ -1.07
GCFC2-211ENST00000541687 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
GCFC2-211ENST00000541687 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
GCFC2-211ENST00000541687 DNAH3Q8TD57 4116 aa8.28□□□□□ -1.08
GCFC2-211ENST00000541687 FBN3Q75N90 2809 aa8.26□□□□□ -1.09
GCFC2-211ENST00000541687 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
GCFC2-211ENST00000541687 LYSTQ99698 3801 aa8.22□□□□□ -1.09
GCFC2-211ENST00000541687 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.1
GCFC2-211ENST00000541687 S4R3F8 94 aa8.2□□□□□ -1.1
GCFC2-211ENST00000541687 CSMD3Q7Z407 3707 aa8.19□□□□□ -1.1
GCFC2-211ENST00000541687 R4GN34 69 aa8.19□□□□□ -1.1
GCFC2-211ENST00000541687 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
GCFC2-211ENST00000541687 HUWE1Q7Z6Z7 4374 aaKnown RBP8.17□□□□□ -1.1
GCFC2-211ENST00000541687 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
GCFC2-211ENST00000541687 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
GCFC2-211ENST00000541687 DNAH1Q9P2D7 4330 aa8.15□□□□□ -1.1
GCFC2-211ENST00000541687 H1FX-AS1Q4G0G2 97 aa8.13□□□□□ -1.11
GCFC2-211ENST00000541687 ROMO1P60602 79 aa8.12□□□□□ -1.11
GCFC2-211ENST00000541687 M0R2T5 61 aa8.12□□□□□ -1.11
GCFC2-211ENST00000541687 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
GCFC2-211ENST00000541687 MEGF8Q7Z7M0 2845 aa8.09□□□□□ -1.11
GCFC2-211ENST00000541687 A6NN06 94 aa8.07□□□□□ -1.12
GCFC2-211ENST00000541687 Q5VSD8 79 aa8.06□□□□□ -1.12
GCFC2-211ENST00000541687 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
GCFC2-211ENST00000541687 M0QZ58 72 aa8.05□□□□□ -1.12
GCFC2-211ENST00000541687 DNAH9Q9NYC9 4486 aa8.04□□□□□ -1.12
GCFC2-211ENST00000541687 DNAH7Q8WXX0 4024 aa8.04□□□□□ -1.12
GCFC2-211ENST00000541687 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
GCFC2-211ENST00000541687 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.14
GCFC2-211ENST00000541687 PLECQ15149 4684 aaKnown RBP7.9□□□□□ -1.14
GCFC2-211ENST00000541687 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.15
GCFC2-211ENST00000541687 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
GCFC2-211ENST00000541687 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
GCFC2-211ENST00000541687 DYNC2H1Q8NCM8 4307 aaKnown RBP7.86□□□□□ -1.15
GCFC2-211ENST00000541687 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
GCFC2-211ENST00000541687 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
GCFC2-211ENST00000541687 STARD9Q9P2P6 4700 aa7.82□□□□□ -1.16
GCFC2-211ENST00000541687 A8MUU9 505 aa7.82□□□□□ -1.16
GCFC2-211ENST00000541687 PRKDCP78527 4128 aaKnown RBP7.8□□□□□ -1.16
GCFC2-211ENST00000541687 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
GCFC2-211ENST00000541687 KMT2AQ03164 3969 aa7.74□□□□□ -1.17
GCFC2-211ENST00000541687 HECTD4Q9Y4D8 3996 aa7.71□□□□□ -1.18
GCFC2-211ENST00000541687 VPS13DQ5THJ4 4388 aa7.71□□□□□ -1.18
GCFC2-211ENST00000541687 DNAH2Q9P225 4427 aa7.69□□□□□ -1.18
GCFC2-211ENST00000541687 FRAS1Q86XX4 4008 aa7.67□□□□□ -1.18
GCFC2-211ENST00000541687 H0YAA0 97 aa7.67□□□□□ -1.18
GCFC2-211ENST00000541687 DNHD1Q96M86 4753 aa7.66□□□□□ -1.18
GCFC2-211ENST00000541687 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
GCFC2-211ENST00000541687 C10orf95Q9H7T3 257 aa7.63□□□□□ -1.19
GCFC2-211ENST00000541687 XP32Q5T750 250 aa7.6□□□□□ -1.19
GCFC2-211ENST00000541687 KRTAP21-3Q3LHN1 58 aa7.59□□□□□ -1.19
GCFC2-211ENST00000541687 DNAH8Q96JB1 4490 aa7.59□□□□□ -1.2
GCFC2-211ENST00000541687 DNAH17Q9UFH2 4485 aa7.56□□□□□ -1.2
GCFC2-211ENST00000541687 DNAH6Q9C0G6 4158 aa7.55□□□□□ -1.2
GCFC2-211ENST00000541687 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
GCFC2-211ENST00000541687 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms