RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 CRYBG3Q68DQ2 2970 aa6.97□□□□□ -1.29
PDE4DIP-227ENST00000529945 H0YAA0 97 aa6.97□□□□□ -1.29
PDE4DIP-227ENST00000529945 TENM3Q9P273 2699 aa6.96□□□□□ -1.29
PDE4DIP-227ENST00000529945 BRCA2P51587 3418 aa6.94□□□□□ -1.3
PDE4DIP-227ENST00000529945 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
PDE4DIP-227ENST00000529945 LAMA3Q16787 3333 aa6.91□□□□□ -1.3
PDE4DIP-227ENST00000529945 LAMA1P25391 3075 aa6.91□□□□□ -1.3
PDE4DIP-227ENST00000529945 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
PDE4DIP-227ENST00000529945 DMXL2Q8TDJ6 3036 aa6.86□□□□□ -1.31
PDE4DIP-227ENST00000529945 CDH23Q9H251 3354 aa6.86□□□□□ -1.31
PDE4DIP-227ENST00000529945 TGP01266 2768 aa6.84□□□□□ -1.31
PDE4DIP-227ENST00000529945 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
PDE4DIP-227ENST00000529945 TACC2O95359 2948 aa6.82□□□□□ -1.32
PDE4DIP-227ENST00000529945 ZZEF1O43149 2961 aa6.81□□□□□ -1.32
PDE4DIP-227ENST00000529945 VCANP13611 3396 aa6.81□□□□□ -1.32
PDE4DIP-227ENST00000529945 ATMQ13315 3056 aa6.79□□□□□ -1.32
PDE4DIP-227ENST00000529945 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
PDE4DIP-227ENST00000529945 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
PDE4DIP-227ENST00000529945 COL6A3P12111 3177 aa6.77□□□□□ -1.33
PDE4DIP-227ENST00000529945 TENM1Q9UKZ4 2725 aa6.76□□□□□ -1.33
PDE4DIP-227ENST00000529945 NF1P21359 2839 aa6.74□□□□□ -1.33
PDE4DIP-227ENST00000529945 ADGRG4Q8IZF6 3080 aa6.73□□□□□ -1.33
PDE4DIP-227ENST00000529945 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
PDE4DIP-227ENST00000529945 SZT2Q5T011 3432 aa6.72□□□□□ -1.33
PDE4DIP-227ENST00000529945 PDZD2O15018 2839 aa6.72□□□□□ -1.33
PDE4DIP-227ENST00000529945 BOD1L1Q8NFC6 3051 aa6.72□□□□□ -1.33
PDE4DIP-227ENST00000529945 KRTAP12-2P59991 146 aa6.71□□□□□ -1.34
PDE4DIP-227ENST00000529945 CFAP47Q6ZTR5 3102 aa6.7□□□□□ -1.34
PDE4DIP-227ENST00000529945 CELSR1Q9NYQ6 3014 aa6.69□□□□□ -1.34
PDE4DIP-227ENST00000529945 TNRC18O15417 2968 aaPredicted RBP6.68□□□□□ -1.34
PDE4DIP-227ENST00000529945 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
PDE4DIP-227ENST00000529945 DMXL1Q9Y485 3027 aa6.67□□□□□ -1.34
PDE4DIP-227ENST00000529945 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.34
PDE4DIP-227ENST00000529945 SPTBN5Q9NRC6 3674 aaKnown RBP6.65□□□□□ -1.34
PDE4DIP-227ENST00000529945 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
PDE4DIP-227ENST00000529945 KRTAP13-1Q8IUC0 172 aa6.62□□□□□ -1.35
PDE4DIP-227ENST00000529945 CELSR2Q9HCU4 2923 aa6.61□□□□□ -1.35
PDE4DIP-227ENST00000529945 SPEGQ15772 3267 aa6.6□□□□□ -1.35
PDE4DIP-227ENST00000529945 INE1O15225 51 aa6.59□□□□□ -1.36
PDE4DIP-227ENST00000529945 DCHS2Q6V1P9 2916 aa6.58□□□□□ -1.36
PDE4DIP-227ENST00000529945 ZFHX4Q86UP3 3567 aa6.57□□□□□ -1.36
PDE4DIP-227ENST00000529945 ZFHX3Q15911 3703 aa6.55□□□□□ -1.36
PDE4DIP-227ENST00000529945 USP34Q70CQ2 3546 aa6.55□□□□□ -1.36
PDE4DIP-227ENST00000529945 WDFY3Q8IZQ1 3526 aa6.5□□□□□ -1.37
PDE4DIP-227ENST00000529945 FLNCQ14315 2725 aa6.49□□□□□ -1.37
PDE4DIP-227ENST00000529945 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
PDE4DIP-227ENST00000529945 XP32Q5T750 250 aa6.47□□□□□ -1.37
PDE4DIP-227ENST00000529945 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
PDE4DIP-227ENST00000529945 MYO15AQ9UKN7 3530 aa6.4□□□□□ -1.39
PDE4DIP-227ENST00000529945 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
PDE4DIP-227ENST00000529945 DCHS1Q96JQ0 3298 aa6.37□□□□□ -1.39
PDE4DIP-227ENST00000529945 ASPMQ8IZT6 3477 aa6.37□□□□□ -1.39
PDE4DIP-227ENST00000529945 ZANQ9Y493 2812 aa6.36□□□□□ -1.39
PDE4DIP-227ENST00000529945 VWFP04275 2813 aa6.36□□□□□ -1.39
PDE4DIP-227ENST00000529945 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
PDE4DIP-227ENST00000529945 TENM4Q6N022 2769 aa6.34□□□□□ -1.39
PDE4DIP-227ENST00000529945 FBN2P35556 2912 aa6.33□□□□□ -1.4
PDE4DIP-227ENST00000529945 LOC400499M0QZD8 3231 aa6.32□□□□□ -1.4
PDE4DIP-227ENST00000529945 LAMA5O15230 3695 aa6.28□□□□□ -1.4
PDE4DIP-227ENST00000529945 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
PDE4DIP-227ENST00000529945 EYSQ5T1H1 3165 aa6.26□□□□□ -1.41
PDE4DIP-227ENST00000529945 OTOGQ6ZRI0 2925 aa6.24□□□□□ -1.41
PDE4DIP-227ENST00000529945 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
PDE4DIP-227ENST00000529945 HRNRQ86YZ3 2850 aaPredicted RBP6.22□□□□□ -1.41
PDE4DIP-227ENST00000529945 PKD1L1Q8TDX9 2849 aa6.19□□□□□ -1.42
PDE4DIP-227ENST00000529945 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
PDE4DIP-227ENST00000529945 SMG1Q96Q15 3661 aaKnown RBP6.18□□□□□ -1.42
PDE4DIP-227ENST00000529945 RELNP78509 3460 aa6.18□□□□□ -1.42
PDE4DIP-227ENST00000529945 KRTAP1-4P0C5Y4 121 aa6.17□□□□□ -1.42
PDE4DIP-227ENST00000529945 NBPF19A0A087WUL8 3843 aa6.16□□□□□ -1.42
PDE4DIP-227ENST00000529945 COL7A1Q02388 2944 aa6.16□□□□□ -1.42
PDE4DIP-227ENST00000529945 KRTAP13-3Q3SY46 172 aa6.14□□□□□ -1.43
PDE4DIP-227ENST00000529945 MXRA5Q9NR99 2828 aa6.13□□□□□ -1.43
PDE4DIP-227ENST00000529945 SPENQ96T58 3664 aaKnown RBP6.11□□□□□ -1.43
PDE4DIP-227ENST00000529945 MEGF8Q7Z7M0 2845 aa6.09□□□□□ -1.43
PDE4DIP-227ENST00000529945 DMDP11532 3685 aa6.09□□□□□ -1.44
PDE4DIP-227ENST00000529945 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
PDE4DIP-227ENST00000529945 CUBNO60494 3623 aa5.9□□□□□ -1.46
PDE4DIP-227ENST00000529945 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
PDE4DIP-227ENST00000529945 SVEP1Q4LDE5 3571 aa5.88□□□□□ -1.47
PDE4DIP-227ENST00000529945 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
PDE4DIP-227ENST00000529945 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
PDE4DIP-227ENST00000529945 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
PDE4DIP-227ENST00000529945 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
PDE4DIP-227ENST00000529945 FBN3Q75N90 2809 aa5.68□□□□□ -1.5
PDE4DIP-227ENST00000529945 VPS13CQ709C8 3753 aa5.68□□□□□ -1.5
PDE4DIP-227ENST00000529945 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
PDE4DIP-227ENST00000529945 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.51
PDE4DIP-227ENST00000529945 MUC3AQ02505 3323 aa5.59□□□□□ -1.51
PDE4DIP-227ENST00000529945 AKAP9Q99996 3911 aa5.58□□□□□ -1.52
PDE4DIP-227ENST00000529945 CSMD2Q7Z408 3487 aa5.54□□□□□ -1.52
PDE4DIP-227ENST00000529945 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
PDE4DIP-227ENST00000529945 TRRAPQ9Y4A5 3859 aa5.51□□□□□ -1.53
PDE4DIP-227ENST00000529945 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
PDE4DIP-227ENST00000529945 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
PDE4DIP-227ENST00000529945 ALMS1Q8TCU4 4167 aa5.44□□□□□ -1.54
PDE4DIP-227ENST00000529945 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
PDE4DIP-227ENST00000529945 KRTAP21-3Q3LHN1 58 aa5.34□□□□□ -1.55
PDE4DIP-227ENST00000529945 BSNQ9UPA5 3926 aa5.32□□□□□ -1.56
PDE4DIP-227ENST00000529945 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms