RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 ACACBO00763 2458 aa0.67□□□□□ -2.3
LDHBP3-201ENST00000514909 AKAP13Q12802 2813 aa0.67□□□□□ -2.3
LDHBP3-201ENST00000514909 RIF1Q5UIP0 2472 aaKnown RBP0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 UGGT1Q9NYU2 1555 aa0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 ITPR1Q14643 2758 aa0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
LDHBP3-201ENST00000514909 H0YGG7 62 aa0.65□□□□□ -2.31
LDHBP3-201ENST00000514909 BIRC6Q9NR09 4857 aa0.64□□□□□ -2.31
LDHBP3-201ENST00000514909 MAP1BP46821 2468 aaKnown RBP0.64□□□□□ -2.31
LDHBP3-201ENST00000514909 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
LDHBP3-201ENST00000514909 SPG11Q96JI7 2443 aa0.63□□□□□ -2.31
LDHBP3-201ENST00000514909 CROCC2H7BZ55 1655 aa0.62□□□□□ -2.31
LDHBP3-201ENST00000514909 CLASP1Q7Z460 1538 aa0.62□□□□□ -2.31
LDHBP3-201ENST00000514909 FLNCQ14315 2725 aa0.62□□□□□ -2.31
LDHBP3-201ENST00000514909 BOD1L1Q8NFC6 3051 aa0.61□□□□□ -2.31
LDHBP3-201ENST00000514909 IGIPA6NJ69 53 aa0.61□□□□□ -2.31
LDHBP3-201ENST00000514909 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
LDHBP3-201ENST00000514909 SYCP2Q9BX26 1530 aa0.6□□□□□ -2.31
LDHBP3-201ENST00000514909 HMCN2Q8NDA2 5059 aa0.6□□□□□ -2.31
LDHBP3-201ENST00000514909 C6orf48Q9UBA6 75 aa0.6□□□□□ -2.31
LDHBP3-201ENST00000514909 UTP20O75691 2785 aaKnown RBP0.59□□□□□ -2.31
LDHBP3-201ENST00000514909 MXRA5Q9NR99 2828 aa0.59□□□□□ -2.31
LDHBP3-201ENST00000514909 ACANP16112 2415 aa0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 ZFHX4Q86UP3 3567 aa0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 LAMA2P24043 3122 aaKnown RBP0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 DSPP15924 2871 aaKnown RBP0.59□□□□□ -2.32
LDHBP3-201ENST00000514909 DNHD1Q96M86 4753 aa0.58□□□□□ -2.32
LDHBP3-201ENST00000514909 RPS27P42677 84 aaKnown RBP0.58□□□□□ -2.32
LDHBP3-201ENST00000514909 RPS27LQ71UM5 84 aaKnown RBP0.58□□□□□ -2.32
LDHBP3-201ENST00000514909 VCANP13611 3396 aa0.57□□□□□ -2.32
LDHBP3-201ENST00000514909 DMBT1Q9UGM3 2413 aaPredicted RBP0.57□□□□□ -2.32
LDHBP3-201ENST00000514909 NBEAL1Q6ZS30 2694 aa0.57□□□□□ -2.32
LDHBP3-201ENST00000514909 CEP295Q9C0D2 2601 aa0.56□□□□□ -2.32
LDHBP3-201ENST00000514909 CFAP46Q8IYW2 2715 aa0.56□□□□□ -2.32
LDHBP3-201ENST00000514909 CSMD1Q96PZ7 3565 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 SPRR2BP35325 72 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 PRLHP81277 87 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 WT1-ASQ06250 92 aa0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 PRRC2CQ9Y520 2896 aaKnown RBP0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 MKI67P46013 3256 aaKnown RBP0.55□□□□□ -2.32
LDHBP3-201ENST00000514909 TGP01266 2768 aa0.54□□□□□ -2.32
LDHBP3-201ENST00000514909 MROH2AA6NES4 1674 aa0.54□□□□□ -2.32
LDHBP3-201ENST00000514909 WNK1Q9H4A3 2382 aa0.54□□□□□ -2.32
LDHBP3-201ENST00000514909 SZT2Q5T011 3432 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 CDC42BPAQ5VT25 1732 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 COL7A1Q02388 2944 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 MGAM2Q2M2H8 2515 aa0.53□□□□□ -2.32
LDHBP3-201ENST00000514909 SPEGQ15772 3267 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 UNC80Q8N2C7 3258 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 S4R3F8 94 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 EP400Q96L91 3159 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 TOGARAM1Q9Y4F4 1720 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 HSPG2P98160 4391 aa0.52□□□□□ -2.33
LDHBP3-201ENST00000514909 TEX15Q9BXT5 2789 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 CFAP47Q6ZTR5 3102 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 USH2AO75445 5202 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 HECTD4Q9Y4D8 3996 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 DCHS1Q96JQ0 3298 aa0.51□□□□□ -2.33
LDHBP3-201ENST00000514909 HERC2O95714 4834 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 APC2O95996 2303 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 LYSTQ99698 3801 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 ADCY10Q96PN6 1610 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 TLN1Q9Y490 2541 aaKnown RBP0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 LAMA3Q16787 3333 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 EYSQ5T1H1 3165 aa0.5□□□□□ -2.33
LDHBP3-201ENST00000514909 ANKRD36CQ5JPF3 1778 aa0.49□□□□□ -2.33
LDHBP3-201ENST00000514909 NBEAQ8NFP9 2946 aa0.49□□□□□ -2.33
LDHBP3-201ENST00000514909 DEFB106AQ8N104 65 aa0.48□□□□□ -2.33
LDHBP3-201ENST00000514909 TMEM167BQ9NRX6 74 aa0.48□□□□□ -2.33
LDHBP3-201ENST00000514909 PCNX1Q96RV3 2341 aa0.47□□□□□ -2.33
LDHBP3-201ENST00000514909 TLN2Q9Y4G6 2542 aa0.47□□□□□ -2.33
LDHBP3-201ENST00000514909 DNAH12Q6ZR08 3092 aa0.46□□□□□ -2.34
LDHBP3-201ENST00000514909 RELNP78509 3460 aa0.45□□□□□ -2.34
LDHBP3-201ENST00000514909 RANBP2P49792 3224 aaKnown RBP0.45□□□□□ -2.34
LDHBP3-201ENST00000514909 MUC12Q9UKN1 5478 aa0.44□□□□□ -2.34
LDHBP3-201ENST00000514909 ITPR2Q14571 2701 aa0.44□□□□□ -2.34
LDHBP3-201ENST00000514909 AGLP35573 1532 aa0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 FANCD2Q9BXW9 1451 aa0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 H0YGX0 51 aa0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 NIPBLQ6KC79 2804 aaeCLIP0.43□□□□□ -2.34
LDHBP3-201ENST00000514909 SPTAN1Q13813 2472 aaKnown RBP0.42□□□□□ -2.34
LDHBP3-201ENST00000514909 C5orf42Q9H799 3197 aa0.42□□□□□ -2.34
LDHBP3-201ENST00000514909 DCHS2Q6V1P9 2916 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 H3BUA1 57 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 MTORP42345 2549 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 CENPFP49454 3210 aa0.41□□□□□ -2.34
LDHBP3-201ENST00000514909 CEP250Q9BV73 2442 aa0.4□□□□□ -2.34
LDHBP3-201ENST00000514909 WDR87Q6ZQQ6 2873 aa0.4□□□□□ -2.34
LDHBP3-201ENST00000514909 FAM186AA6NE01 2351 aa0.39□□□□□ -2.35
LDHBP3-201ENST00000514909 LINC00308Q8TCZ7 52 aa0.39□□□□□ -2.35
LDHBP3-201ENST00000514909 MUC3AQ02505 3323 aa0.39□□□□□ -2.35
LDHBP3-201ENST00000514909 LRBAP50851 2863 aa0.38□□□□□ -2.35
LDHBP3-201ENST00000514909 LRP1BQ9NZR2 4599 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 CRYBG3Q68DQ2 2970 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 CEP290O15078 2479 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 PLNP26678 52 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 NBASA2RRP1 2371 aa0.37□□□□□ -2.35
LDHBP3-201ENST00000514909 C9orf92A6NGG3 77 aa0.36□□□□□ -2.35
LDHBP3-201ENST00000514909 TIMM8BQ9Y5J9 83 aaPredicted RBP0.36□□□□□ -2.35
LDHBP3-201ENST00000514909 PKD1P98161 4303 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms