RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 AEBP2Q6ZN18 517 aaPredicted RBP32■■■□□ 2.71
LDHBP3-201ENST00000514909 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
LDHBP3-201ENST00000514909 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
LDHBP3-201ENST00000514909 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
LDHBP3-201ENST00000514909 FOXD1Q16676 465 aa25.43■■□□□ 1.66
LDHBP3-201ENST00000514909 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
LDHBP3-201ENST00000514909 MSH5O43196 834 aa23.75■■□□□ 1.39
LDHBP3-201ENST00000514909 PPP6R1Q9UPN7 881 aa23.74■■□□□ 1.39
LDHBP3-201ENST00000514909 PIAS4Q8N2W9 510 aaPredicted RBP23.66■■□□□ 1.38
LDHBP3-201ENST00000514909 ADRA2BP18089 450 aa23.61■■□□□ 1.37
LDHBP3-201ENST00000514909 POTEDQ86YR6 584 aa23.45■■□□□ 1.34
LDHBP3-201ENST00000514909 KCNA4P22459 653 aa21.87■■□□□ 1.09
LDHBP3-201ENST00000514909 MAPK8IP2Q13387 824 aaPredicted RBP21.74■■□□□ 1.07
LDHBP3-201ENST00000514909 DMRT2Q9Y5R5 561 aa21.59■■□□□ 1.05
LDHBP3-201ENST00000514909 EHMT2Q96KQ7 1210 aa21.58■■□□□ 1.05
LDHBP3-201ENST00000514909 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
LDHBP3-201ENST00000514909 PPP4R3CPQ6ZMV5 832 aa21.17■□□□□ 0.98
LDHBP3-201ENST00000514909 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
LDHBP3-201ENST00000514909 NCBP3Q53F19 620 aaKnown RBP20.98■□□□□ 0.95
LDHBP3-201ENST00000514909 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
LDHBP3-201ENST00000514909 HOXD11P31277 338 aaPredicted RBP20.77■□□□□ 0.92
LDHBP3-201ENST00000514909 CNKSR2Q8WXI2 1034 aa20.69■□□□□ 0.9
LDHBP3-201ENST00000514909 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
LDHBP3-201ENST00000514909 DCAF8L1A6NGE4 600 aa20.6■□□□□ 0.89
LDHBP3-201ENST00000514909 RNF216Q9NWF9 866 aaPredicted RBP20.55■□□□□ 0.88
LDHBP3-201ENST00000514909 CACNB1Q02641 598 aaPredicted RBP20.44■□□□□ 0.86
LDHBP3-201ENST00000514909 RNF39Q9H2S5 420 aa20.33■□□□□ 0.85
LDHBP3-201ENST00000514909 ZBTB22O15209 634 aa20.16■□□□□ 0.82
LDHBP3-201ENST00000514909 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
LDHBP3-201ENST00000514909 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
LDHBP3-201ENST00000514909 FOXD4L1Q9NU39 408 aa19.89■□□□□ 0.77
LDHBP3-201ENST00000514909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.69■□□□□ 0.74
LDHBP3-201ENST00000514909 U3KPZ7 1027 aaPredicted RBP19.37■□□□□ 0.69
LDHBP3-201ENST00000514909 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
LDHBP3-201ENST00000514909 ATXN8OSP0DMR3 200 aa19.17■□□□□ 0.66
LDHBP3-201ENST00000514909 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
LDHBP3-201ENST00000514909 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
LDHBP3-201ENST00000514909 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.64
LDHBP3-201ENST00000514909 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
LDHBP3-201ENST00000514909 CAPN15O75808 1086 aa19■□□□□ 0.63
LDHBP3-201ENST00000514909 DSG3P32926 999 aa18.99■□□□□ 0.63
LDHBP3-201ENST00000514909 SLC24A1O60721 1099 aa18.97■□□□□ 0.63
LDHBP3-201ENST00000514909 FKBP8Q14318 412 aa18.81■□□□□ 0.6
LDHBP3-201ENST00000514909 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
LDHBP3-201ENST00000514909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
LDHBP3-201ENST00000514909 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
LDHBP3-201ENST00000514909 APLP2Q06481 763 aa18.65■□□□□ 0.58
LDHBP3-201ENST00000514909 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
LDHBP3-201ENST00000514909 ABCB7O75027 752 aa18.59■□□□□ 0.57
LDHBP3-201ENST00000514909 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
LDHBP3-201ENST00000514909 ATF5Q9Y2D1 282 aaPredicted RBP18.4■□□□□ 0.54
LDHBP3-201ENST00000514909 POTEHQ6S545 545 aa18.32■□□□□ 0.52
LDHBP3-201ENST00000514909 POLA2Q14181 598 aa18.18■□□□□ 0.5
LDHBP3-201ENST00000514909 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
LDHBP3-201ENST00000514909 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
LDHBP3-201ENST00000514909 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
LDHBP3-201ENST00000514909 PROM2Q8N271 834 aa17.79■□□□□ 0.44
LDHBP3-201ENST00000514909 CHRDL2Q6WN34 429 aa17.74■□□□□ 0.43
LDHBP3-201ENST00000514909 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
LDHBP3-201ENST00000514909 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
LDHBP3-201ENST00000514909 VASPP50552 380 aaPredicted RBP17.64■□□□□ 0.41
LDHBP3-201ENST00000514909 AKT1S1Q96B36 256 aa17.64■□□□□ 0.41
LDHBP3-201ENST00000514909 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
LDHBP3-201ENST00000514909 FBLN2P98095 1184 aa17.61■□□□□ 0.41
LDHBP3-201ENST00000514909 PLCB2Q00722 1185 aa17.59■□□□□ 0.41
LDHBP3-201ENST00000514909 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
LDHBP3-201ENST00000514909 IFNLR1Q8IU57 520 aaPredicted RBP17.45■□□□□ 0.38
LDHBP3-201ENST00000514909 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
LDHBP3-201ENST00000514909 PIP4P2Q8N4L2 257 aa17.32■□□□□ 0.36
LDHBP3-201ENST00000514909 PKD2Q13563 968 aa17.3■□□□□ 0.36
LDHBP3-201ENST00000514909 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
LDHBP3-201ENST00000514909 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
LDHBP3-201ENST00000514909 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
LDHBP3-201ENST00000514909 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
LDHBP3-201ENST00000514909 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
LDHBP3-201ENST00000514909 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
LDHBP3-201ENST00000514909 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
LDHBP3-201ENST00000514909 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
LDHBP3-201ENST00000514909 BCANQ96GW7 911 aa17.1■□□□□ 0.33
LDHBP3-201ENST00000514909 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
LDHBP3-201ENST00000514909 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
LDHBP3-201ENST00000514909 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
LDHBP3-201ENST00000514909 BBXQ8WY36 941 aaPredicted RBP17.01■□□□□ 0.31
LDHBP3-201ENST00000514909 KLHL34Q8N239 644 aa17■□□□□ 0.31
LDHBP3-201ENST00000514909 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
LDHBP3-201ENST00000514909 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
LDHBP3-201ENST00000514909 HAX1O00165 279 aa16.97■□□□□ 0.31
LDHBP3-201ENST00000514909 ECM2O94769 699 aaPredicted RBP16.96■□□□□ 0.31
LDHBP3-201ENST00000514909 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
LDHBP3-201ENST00000514909 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
LDHBP3-201ENST00000514909 EVX2Q03828 476 aa16.87■□□□□ 0.29
LDHBP3-201ENST00000514909 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
LDHBP3-201ENST00000514909 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
LDHBP3-201ENST00000514909 PLCD3Q8N3E9 789 aa16.84■□□□□ 0.29
LDHBP3-201ENST00000514909 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
LDHBP3-201ENST00000514909 PAXIP1Q6ZW49 1069 aaPredicted RBP16.79■□□□□ 0.28
LDHBP3-201ENST00000514909 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
LDHBP3-201ENST00000514909 RGL2O15211 777 aa16.76■□□□□ 0.27
LDHBP3-201ENST00000514909 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
LDHBP3-201ENST00000514909 MIER1Q8N108 512 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms