RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 STARD9Q9P2P6 4700 aa1.65□□□□□ -2.14
PVT1-202ENST00000512617 TRAV21A0A0B4J279 112 aa1.65□□□□□ -2.15
PVT1-202ENST00000512617 LINC01549A6NIU2 74 aa1.65□□□□□ -2.15
PVT1-202ENST00000512617 G3V318 75 aa1.65□□□□□ -2.15
PVT1-202ENST00000512617 DEFB136Q30KP8 78 aa1.65□□□□□ -2.15
PVT1-202ENST00000512617 RPL39P5Q59GN2 51 aa1.65□□□□□ -2.15
PVT1-202ENST00000512617 DYNC2H1Q8NCM8 4307 aaKnown RBP1.64□□□□□ -2.15
PVT1-202ENST00000512617 SERF2P84101 59 aa1.64□□□□□ -2.15
PVT1-202ENST00000512617 NREPQ16612 68 aa1.64□□□□□ -2.15
PVT1-202ENST00000512617 KLK9Q2XQG4 91 aa1.64□□□□□ -2.15
PVT1-202ENST00000512617 ZCCHC13Q8WW36 166 aaKnown RBP1.64□□□□□ -2.15
PVT1-202ENST00000512617 ARHGAP5-AS1Q96IT6 56 aa1.64□□□□□ -2.15
PVT1-202ENST00000512617 DNAH1Q9P2D7 4330 aa1.63□□□□□ -2.15
PVT1-202ENST00000512617 TRBV30A0A0K0K1B3 111 aa1.63□□□□□ -2.15
PVT1-202ENST00000512617 H3BUA1 57 aa1.63□□□□□ -2.15
PVT1-202ENST00000512617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.63□□□□□ -2.15
PVT1-202ENST00000512617 PLECQ15149 4684 aaKnown RBP1.63□□□□□ -2.15
PVT1-202ENST00000512617 COL7A1Q02388 2944 aa1.63□□□□□ -2.15
PVT1-202ENST00000512617 TRBV6-1A0A0K0K1D8 114 aa1.62□□□□□ -2.15
PVT1-202ENST00000512617 PRH1P02810 166 aa1.62□□□□□ -2.15
PVT1-202ENST00000512617 UNQ6190/PRO20217Q6UXQ8 127 aa1.62□□□□□ -2.15
PVT1-202ENST00000512617 Q6ZRX8 168 aa1.62□□□□□ -2.15
PVT1-202ENST00000512617 TMEM167AQ8TBQ9 72 aa1.62□□□□□ -2.15
PVT1-202ENST00000512617 SMIM11BQ8TCY0 68 aa1.62□□□□□ -2.15
PVT1-202ENST00000512617 DNAH7Q8WXX0 4024 aa1.62□□□□□ -2.15
PVT1-202ENST00000512617 A0A1B0GU69 56 aa1.61□□□□□ -2.15
PVT1-202ENST00000512617 HAMPP81172 84 aa1.61□□□□□ -2.15
PVT1-202ENST00000512617 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
PVT1-202ENST00000512617 USMG5Q96IX5 58 aa1.61□□□□□ -2.15
PVT1-202ENST00000512617 HERC2O95714 4834 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 ALMS1Q8TCU4 4167 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 LCE6AA0A183 80 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 NCR3O14931 201 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 APELAP0DMC3 54 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 WT1-ASQ06250 92 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 DEFB114Q30KQ6 69 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 TNCP24821 2201 aa1.6□□□□□ -2.15
PVT1-202ENST00000512617 PCLOQ9Y6V0 5065 aa1.59□□□□□ -2.15
PVT1-202ENST00000512617 GVQW2A0A096LPI5 108 aaPredicted RBP1.59□□□□□ -2.15
PVT1-202ENST00000512617 I3L2K1 104 aa1.59□□□□□ -2.15
PVT1-202ENST00000512617 K7EIM0 57 aa1.59□□□□□ -2.15
PVT1-202ENST00000512617 FCER1GP30273 86 aa1.59□□□□□ -2.15
PVT1-202ENST00000512617 KRTAP13-4Q3LI77 160 aa1.59□□□□□ -2.15
PVT1-202ENST00000512617 ENHOQ6UWT2 76 aa1.59□□□□□ -2.15
PVT1-202ENST00000512617 UBL5Q9BZL1 73 aa1.59□□□□□ -2.15
PVT1-202ENST00000512617 CSMD3Q7Z407 3707 aa1.59□□□□□ -2.16
PVT1-202ENST00000512617 TENM3Q9P273 2699 aa1.59□□□□□ -2.16
PVT1-202ENST00000512617 LYSTQ99698 3801 aa1.59□□□□□ -2.16
PVT1-202ENST00000512617 STAB2Q8WWQ8 2551 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 SORL1Q92673 2214 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 TENM2Q9NT68 2774 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 SMIM27A0A1W2PRY6 76 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 NDUFA4O00483 81 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 PRCDQ00LT1 54 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 SPINK13Q1W4C9 94 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 LINC00575Q6W349 94 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 KIAA1109Q2LD37 5005 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 VPS13DQ5THJ4 4388 aa1.58□□□□□ -2.16
PVT1-202ENST00000512617 DNAH6Q9C0G6 4158 aa1.57□□□□□ -2.16
PVT1-202ENST00000512617 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
PVT1-202ENST00000512617 LINC00959A0A1B0GUT2 108 aa1.57□□□□□ -2.16
PVT1-202ENST00000512617 LCE3CQ5T5A8 94 aa1.57□□□□□ -2.16
PVT1-202ENST00000512617 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
PVT1-202ENST00000512617 RYR1P21817 5038 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 SPRR5A0A1B0GTR4 108 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 KRTAP12-2P59991 146 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 KRTAP10-12P60413 245 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 DEFB135Q30KP9 77 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 SPINK9Q5DT21 86 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 SSBP3-AS1Q7Z2R9 100 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 RHPN1-AS1Q9BWJ2 59 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 FAT2Q9NYQ8 4349 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 DNAH10Q8IVF4 4471 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 FRAS1Q86XX4 4008 aa1.56□□□□□ -2.16
PVT1-202ENST00000512617 DNAH2Q9P225 4427 aa1.55□□□□□ -2.16
PVT1-202ENST00000512617 LINC01546A6NGU7 62 aa1.55□□□□□ -2.16
PVT1-202ENST00000512617 A8MTW9 85 aa1.55□□□□□ -2.16
PVT1-202ENST00000512617 LY6G6CO95867 125 aa1.55□□□□□ -2.16
PVT1-202ENST00000512617 COX7BP24311 80 aa1.55□□□□□ -2.16
PVT1-202ENST00000512617 KRTAP10-6P60371 365 aaPredicted RBP1.55□□□□□ -2.16
PVT1-202ENST00000512617 TMEM167BQ9NRX6 74 aa1.55□□□□□ -2.16
PVT1-202ENST00000512617 ABCA13Q86UQ4 5058 aa1.55□□□□□ -2.16
PVT1-202ENST00000512617 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
PVT1-202ENST00000512617 DEFB131AP59861 70 aa1.54□□□□□ -2.16
PVT1-202ENST00000512617 KRTAP10-1P60331 282 aa1.54□□□□□ -2.16
PVT1-202ENST00000512617 APLNQ9ULZ1 77 aa1.54□□□□□ -2.16
PVT1-202ENST00000512617 DNAH17Q9UFH2 4485 aa1.54□□□□□ -2.16
PVT1-202ENST00000512617 HECTD4Q9Y4D8 3996 aa1.53□□□□□ -2.16
PVT1-202ENST00000512617 A0A1B0GVY2 172 aa1.53□□□□□ -2.16
PVT1-202ENST00000512617 DEFB4AO15263 64 aa1.53□□□□□ -2.16
PVT1-202ENST00000512617 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
PVT1-202ENST00000512617 DEFB1P60022 68 aa1.53□□□□□ -2.16
PVT1-202ENST00000512617 RPL37P61927 97 aaKnown RBP1.53□□□□□ -2.16
PVT1-202ENST00000512617 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
PVT1-202ENST00000512617 IAPPP10997 89 aa1.52□□□□□ -2.17
PVT1-202ENST00000512617 CNFNQ9BYD5 112 aa1.52□□□□□ -2.17
PVT1-202ENST00000512617 HSPG2P98160 4391 aa1.52□□□□□ -2.17
PVT1-202ENST00000512617 APOBP04114 4563 aaKnown RBP1.51□□□□□ -2.17
PVT1-202ENST00000512617 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
PVT1-202ENST00000512617 KRTAP5-9P26371 169 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms