RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 ACANP16112 2415 aa0.48□□□□□ -2.33
GYPA-203ENST00000503627 NBASA2RRP1 2371 aa0.48□□□□□ -2.33
GYPA-203ENST00000503627 NDUFA1O15239 70 aa0.47□□□□□ -2.33
GYPA-203ENST00000503627 ATP7AQ04656 1500 aa0.47□□□□□ -2.33
GYPA-203ENST00000503627 CREBBPQ92793 2442 aa0.46□□□□□ -2.34
GYPA-203ENST00000503627 SPRR2BP35325 72 aa0.46□□□□□ -2.34
GYPA-203ENST00000503627 MAST4O15021 2626 aa0.46□□□□□ -2.34
GYPA-203ENST00000503627 TRPM2O94759 1503 aa0.45□□□□□ -2.34
GYPA-203ENST00000503627 M0QY20 66 aa0.45□□□□□ -2.34
GYPA-203ENST00000503627 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
GYPA-203ENST00000503627 MMP24-AS1A0A0U1RRL7 71 aa0.44□□□□□ -2.34
GYPA-203ENST00000503627 DEFB131AP59861 70 aa0.44□□□□□ -2.34
GYPA-203ENST00000503627 NSD1Q96L73 2696 aaPredicted RBP0.44□□□□□ -2.34
GYPA-203ENST00000503627 MUC5BQ9HC84 5762 aaPredicted RBP0.43□□□□□ -2.34
GYPA-203ENST00000503627 PKD1L2Q7Z442 2459 aa0.43□□□□□ -2.34
GYPA-203ENST00000503627 FLNBO75369 2602 aaKnown RBP0.42□□□□□ -2.34
GYPA-203ENST00000503627 AHNAKQ09666 5890 aaKnown RBP0.41□□□□□ -2.34
GYPA-203ENST00000503627 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
GYPA-203ENST00000503627 SAMD9LQ8IVG5 1584 aa0.4□□□□□ -2.34
GYPA-203ENST00000503627 SPTBN4Q9H254 2564 aa0.4□□□□□ -2.35
GYPA-203ENST00000503627 HSPG2P98160 4391 aa0.39□□□□□ -2.35
GYPA-203ENST00000503627 DEFB110Q30KQ9 67 aa0.39□□□□□ -2.35
GYPA-203ENST00000503627 PDZD2O15018 2839 aa0.39□□□□□ -2.35
GYPA-203ENST00000503627 DCHS2Q6V1P9 2916 aa0.39□□□□□ -2.35
GYPA-203ENST00000503627 NF1P21359 2839 aa0.37□□□□□ -2.35
GYPA-203ENST00000503627 HECTD4Q9Y4D8 3996 aa0.36□□□□□ -2.35
GYPA-203ENST00000503627 A0A0C4DFX4 3053 aa0.36□□□□□ -2.35
GYPA-203ENST00000503627 A8MTW9 85 aa0.36□□□□□ -2.35
GYPA-203ENST00000503627 GCN1Q92616 2671 aaKnown RBP0.35□□□□□ -2.35
GYPA-203ENST00000503627 HMCN2Q8NDA2 5059 aa0.35□□□□□ -2.35
GYPA-203ENST00000503627 TNP1P09430 55 aa0.35□□□□□ -2.35
GYPA-203ENST00000503627 COL7A1Q02388 2944 aa0.35□□□□□ -2.35
GYPA-203ENST00000503627 SRRM2Q9UQ35 2752 aaKnown RBP0.34□□□□□ -2.35
GYPA-203ENST00000503627 FLNCQ14315 2725 aa0.34□□□□□ -2.35
GYPA-203ENST00000503627 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.36
GYPA-203ENST00000503627 ZZEF1O43149 2961 aa0.34□□□□□ -2.36
GYPA-203ENST00000503627 SPRR2AP35326 72 aa0.33□□□□□ -2.36
GYPA-203ENST00000503627 PKD1P98161 4303 aa0.32□□□□□ -2.36
GYPA-203ENST00000503627 CUBNO60494 3623 aa0.32□□□□□ -2.36
GYPA-203ENST00000503627 M0QZ58 72 aa0.32□□□□□ -2.36
GYPA-203ENST00000503627 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
GYPA-203ENST00000503627 DMXL1Q9Y485 3027 aa0.32□□□□□ -2.36
GYPA-203ENST00000503627 POLR2KP53803 58 aaKnown RBP0.3□□□□□ -2.36
GYPA-203ENST00000503627 SETD2Q9BYW2 2564 aaPredicted RBP0.29□□□□□ -2.36
GYPA-203ENST00000503627 STAB1Q9NY15 2570 aa0.29□□□□□ -2.36
GYPA-203ENST00000503627 COL6A3P12111 3177 aa0.29□□□□□ -2.36
GYPA-203ENST00000503627 FLNAP21333 2647 aaKnown RBP0.28□□□□□ -2.36
GYPA-203ENST00000503627 SACSQ9NZJ4 4579 aa0.28□□□□□ -2.36
GYPA-203ENST00000503627 SONP18583 2426 aaKnown RBP0.28□□□□□ -2.36
GYPA-203ENST00000503627 MTORP42345 2549 aa0.27□□□□□ -2.37
GYPA-203ENST00000503627 SVEP1Q4LDE5 3571 aa0.27□□□□□ -2.37
GYPA-203ENST00000503627 LRP1BQ9NZR2 4599 aa0.27□□□□□ -2.37
GYPA-203ENST00000503627 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
GYPA-203ENST00000503627 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
GYPA-203ENST00000503627 TACC2O95359 2948 aa0.25□□□□□ -2.37
GYPA-203ENST00000503627 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
GYPA-203ENST00000503627 DNAH3Q8TD57 4116 aa0.24□□□□□ -2.37
GYPA-203ENST00000503627 PKHD1P08F94 4074 aa0.24□□□□□ -2.37
GYPA-203ENST00000503627 FLGP20930 4061 aaPredicted RBP0.24□□□□□ -2.37
GYPA-203ENST00000503627 SPRR2EP22531 72 aa0.24□□□□□ -2.37
GYPA-203ENST00000503627 PKHD1L1Q86WI1 4243 aa0.24□□□□□ -2.37
GYPA-203ENST00000503627 ANKRD11Q6UB99 2663 aaPredicted RBP0.24□□□□□ -2.37
GYPA-203ENST00000503627 COL6A5A8TX70 2615 aa0.24□□□□□ -2.37
GYPA-203ENST00000503627 ZANQ9Y493 2812 aa0.23□□□□□ -2.37
GYPA-203ENST00000503627 MT1AP04731 61 aa0.23□□□□□ -2.37
GYPA-203ENST00000503627 MAP1AP78559 2803 aaPredicted RBP0.23□□□□□ -2.37
GYPA-203ENST00000503627 TENM2Q9NT68 2774 aa0.23□□□□□ -2.37
GYPA-203ENST00000503627 KMT2DO14686 5537 aa0.22□□□□□ -2.37
GYPA-203ENST00000503627 LRP2P98164 4655 aa0.22□□□□□ -2.37
GYPA-203ENST00000503627 SPG11Q96JI7 2443 aa0.22□□□□□ -2.37
GYPA-203ENST00000503627 CLPSL2Q6UWE3 100 aa0.22□□□□□ -2.37
GYPA-203ENST00000503627 MROH2BQ7Z745 1585 aa0.22□□□□□ -2.37
GYPA-203ENST00000503627 SPENQ96T58 3664 aaKnown RBP0.22□□□□□ -2.37
GYPA-203ENST00000503627 LRRK2Q5S007 2527 aa0.22□□□□□ -2.37
GYPA-203ENST00000503627 KALRNO60229 2985 aa0.21□□□□□ -2.38
GYPA-203ENST00000503627 ACACAQ13085 2346 aa0.21□□□□□ -2.38
GYPA-203ENST00000503627 ANK3Q12955 4377 aaKnown RBP0.21□□□□□ -2.38
GYPA-203ENST00000503627 DUOX1Q9NRD9 1551 aa0.2□□□□□ -2.38
GYPA-203ENST00000503627 AKAP9Q99996 3911 aa0.2□□□□□ -2.38
GYPA-203ENST00000503627 GCC2Q8IWJ2 1684 aa0.2□□□□□ -2.38
GYPA-203ENST00000503627 HTTP42858 3142 aa0.19□□□□□ -2.38
GYPA-203ENST00000503627 SPART-AS1P0CW21 52 aa0.19□□□□□ -2.38
GYPA-203ENST00000503627 ANKHD1Q8IWZ3 2542 aaKnown RBP0.19□□□□□ -2.38
GYPA-203ENST00000503627 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
GYPA-203ENST00000503627 TGP01266 2768 aa0.18□□□□□ -2.38
GYPA-203ENST00000503627 DNAH9Q9NYC9 4486 aa0.17□□□□□ -2.38
GYPA-203ENST00000503627 ACACBO00763 2458 aa0.17□□□□□ -2.38
GYPA-203ENST00000503627 RANBP2P49792 3224 aaKnown RBP0.17□□□□□ -2.38
GYPA-203ENST00000503627 SNRPGP62308 76 aaKnown RBP0.17□□□□□ -2.38
GYPA-203ENST00000503627 RPL39P62891 51 aaKnown RBP0.17□□□□□ -2.38
GYPA-203ENST00000503627 HIVEP1P15822 2718 aa0.17□□□□□ -2.38
GYPA-203ENST00000503627 UTP20O75691 2785 aaKnown RBP0.17□□□□□ -2.38
GYPA-203ENST00000503627 NBEAL2Q6ZNJ1 2754 aa0.16□□□□□ -2.38
GYPA-203ENST00000503627 DNAH11Q96DT5 4516 aa0.16□□□□□ -2.38
GYPA-203ENST00000503627 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
GYPA-203ENST00000503627 NBEAQ8NFP9 2946 aa0.14□□□□□ -2.39
GYPA-203ENST00000503627 LAMA5O15230 3695 aa0.14□□□□□ -2.39
GYPA-203ENST00000503627 FASNP49327 2511 aaKnown RBP0.14□□□□□ -2.39
GYPA-203ENST00000503627 TOMM7Q9P0U1 55 aa0.14□□□□□ -2.39
GYPA-203ENST00000503627 FAM186AA6NE01 2351 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms