RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 FLNAP21333 2647 aaKnown RBP2.83□□□□□ -1.96
NEAT1-202ENST00000501122 SPRR1BP22528 89 aa2.83□□□□□ -1.96
NEAT1-202ENST00000501122 A0A1W2PPR1 153 aa2.82□□□□□ -1.96
NEAT1-202ENST00000501122 ITPR2Q14571 2701 aa2.81□□□□□ -1.96
NEAT1-202ENST00000501122 P0C880 135 aa2.81□□□□□ -1.96
NEAT1-202ENST00000501122 R4GN34 69 aa2.81□□□□□ -1.96
NEAT1-202ENST00000501122 SRRM2Q9UQ35 2752 aaKnown RBP2.8□□□□□ -1.96
NEAT1-202ENST00000501122 THSD7BQ9C0I4 1608 aa2.8□□□□□ -1.96
NEAT1-202ENST00000501122 S4R3F8 94 aa2.8□□□□□ -1.96
NEAT1-202ENST00000501122 BRCA2P51587 3418 aa2.78□□□□□ -1.96
NEAT1-202ENST00000501122 A0A087WTM6 91 aa2.78□□□□□ -1.96
NEAT1-202ENST00000501122 SMR3BP02814 79 aaPredicted RBP2.78□□□□□ -1.96
NEAT1-202ENST00000501122 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
NEAT1-202ENST00000501122 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
NEAT1-202ENST00000501122 M0QZ58 72 aa2.77□□□□□ -1.97
NEAT1-202ENST00000501122 Q6ZSA8 131 aa2.76□□□□□ -1.97
NEAT1-202ENST00000501122 MXRA5Q9NR99 2828 aa2.75□□□□□ -1.97
NEAT1-202ENST00000501122 FLNCQ14315 2725 aa2.75□□□□□ -1.97
NEAT1-202ENST00000501122 TENM4Q6N022 2769 aa2.75□□□□□ -1.97
NEAT1-202ENST00000501122 H0YAA0 97 aa2.71□□□□□ -1.97
NEAT1-202ENST00000501122 VWFP04275 2813 aa2.71□□□□□ -1.98
NEAT1-202ENST00000501122 PKD1L1Q8TDX9 2849 aa2.71□□□□□ -1.98
NEAT1-202ENST00000501122 TENM1Q9UKZ4 2725 aa2.71□□□□□ -1.98
NEAT1-202ENST00000501122 DNAH14Q0VDD8 3507 aa2.71□□□□□ -1.98
NEAT1-202ENST00000501122 MYO15AQ9UKN7 3530 aa2.7□□□□□ -1.98
NEAT1-202ENST00000501122 USP34Q70CQ2 3546 aa2.7□□□□□ -1.98
NEAT1-202ENST00000501122 KRTAP24-1Q3LI83 254 aa2.68□□□□□ -1.98
NEAT1-202ENST00000501122 KRTAP10-11P60412 298 aa2.67□□□□□ -1.98
NEAT1-202ENST00000501122 KRTAP10-8P60410 259 aa2.67□□□□□ -1.98
NEAT1-202ENST00000501122 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
NEAT1-202ENST00000501122 WWC2-AS2Q96NR7 200 aa2.66□□□□□ -1.98
NEAT1-202ENST00000501122 TNP1P09430 55 aa2.65□□□□□ -1.99
NEAT1-202ENST00000501122 KRTAP10-3P60369 221 aa2.64□□□□□ -1.99
NEAT1-202ENST00000501122 INE1O15225 51 aa2.64□□□□□ -1.99
NEAT1-202ENST00000501122 KRTAP23-1A1A580 65 aa2.63□□□□□ -1.99
NEAT1-202ENST00000501122 TPRXLQ17RH7 258 aa2.63□□□□□ -1.99
NEAT1-202ENST00000501122 TENM2Q9NT68 2774 aa2.62□□□□□ -1.99
NEAT1-202ENST00000501122 KRTAP7-1Q8IUC3 87 aa2.62□□□□□ -1.99
NEAT1-202ENST00000501122 M0R2T5 61 aa2.61□□□□□ -1.99
NEAT1-202ENST00000501122 MUC22E2RYF6 1773 aaPredicted RBP2.61□□□□□ -1.99
NEAT1-202ENST00000501122 TGP01266 2768 aa2.61□□□□□ -1.99
NEAT1-202ENST00000501122 SZT2Q5T011 3432 aa2.61□□□□□ -1.99
NEAT1-202ENST00000501122 FBN3Q75N90 2809 aa2.6□□□□□ -1.99
NEAT1-202ENST00000501122 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
NEAT1-202ENST00000501122 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
NEAT1-202ENST00000501122 COL4A2P08572 1712 aa2.55□□□□□ -2
NEAT1-202ENST00000501122 MEGF8Q7Z7M0 2845 aa2.54□□□□□ -2
NEAT1-202ENST00000501122 KRTAP1-3Q8IUG1 177 aa2.53□□□□□ -2
NEAT1-202ENST00000501122 Q6ZRN7 208 aaPredicted RBP2.52□□□□□ -2.01
NEAT1-202ENST00000501122 KRTAP1-1Q07627 177 aa2.5□□□□□ -2.01
NEAT1-202ENST00000501122 RELNP78509 3460 aa2.5□□□□□ -2.01
NEAT1-202ENST00000501122 CUBNO60494 3623 aa2.49□□□□□ -2.01
NEAT1-202ENST00000501122 ZFHX3Q15911 3703 aa2.48□□□□□ -2.01
NEAT1-202ENST00000501122 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
NEAT1-202ENST00000501122 WDFY3Q8IZQ1 3526 aa2.46□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP13-1Q8IUC0 172 aa2.46□□□□□ -2.02
NEAT1-202ENST00000501122 CSMD1Q96PZ7 3565 aa2.46□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP10-1P60331 282 aa2.45□□□□□ -2.02
NEAT1-202ENST00000501122 HRNRQ86YZ3 2850 aaPredicted RBP2.45□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP12-2P59991 146 aa2.44□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP1-5Q9BYS1 174 aa2.44□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP13-3Q3SY46 172 aa2.44□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP10-2P60368 255 aa2.42□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
NEAT1-202ENST00000501122 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
NEAT1-202ENST00000501122 Q5VSD8 79 aa2.39□□□□□ -2.03
NEAT1-202ENST00000501122 XP32Q5T750 250 aa2.39□□□□□ -2.03
NEAT1-202ENST00000501122 NBPF19A0A087WUL8 3843 aa2.39□□□□□ -2.03
NEAT1-202ENST00000501122 ALMS1Q8TCU4 4167 aa2.38□□□□□ -2.03
NEAT1-202ENST00000501122 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
NEAT1-202ENST00000501122 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
NEAT1-202ENST00000501122 SMG1Q96Q15 3661 aaKnown RBP2.36□□□□□ -2.03
NEAT1-202ENST00000501122 KRTAP3-1Q9BYR8 98 aa2.34□□□□□ -2.03
NEAT1-202ENST00000501122 MUC3AQ02505 3323 aa2.32□□□□□ -2.04
NEAT1-202ENST00000501122 SVEP1Q4LDE5 3571 aa2.32□□□□□ -2.04
NEAT1-202ENST00000501122 KRTAP10-6P60371 365 aaPredicted RBP2.31□□□□□ -2.04
NEAT1-202ENST00000501122 KRTAP19-4Q3LI73 84 aa2.29□□□□□ -2.04
NEAT1-202ENST00000501122 TRRAPQ9Y4A5 3859 aa2.28□□□□□ -2.04
NEAT1-202ENST00000501122 ZFHX4Q86UP3 3567 aa2.28□□□□□ -2.04
NEAT1-202ENST00000501122 KRTAP3-2Q9BYR7 98 aa2.28□□□□□ -2.05
NEAT1-202ENST00000501122 SPTBN5Q9NRC6 3674 aaKnown RBP2.25□□□□□ -2.05
NEAT1-202ENST00000501122 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
NEAT1-202ENST00000501122 SPENQ96T58 3664 aaKnown RBP2.24□□□□□ -2.05
NEAT1-202ENST00000501122 KRTAP21-3Q3LHN1 58 aa2.22□□□□□ -2.05
NEAT1-202ENST00000501122 LAMA5O15230 3695 aa2.22□□□□□ -2.05
NEAT1-202ENST00000501122 CSMD2Q7Z408 3487 aa2.21□□□□□ -2.06
NEAT1-202ENST00000501122 DNAH11Q96DT5 4516 aa2.21□□□□□ -2.06
NEAT1-202ENST00000501122 KRTAP1-4P0C5Y4 121 aa2.2□□□□□ -2.06
NEAT1-202ENST00000501122 ANK3Q12955 4377 aaKnown RBP2.19□□□□□ -2.06
NEAT1-202ENST00000501122 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
NEAT1-202ENST00000501122 MT3P25713 68 aa2.18□□□□□ -2.06
NEAT1-202ENST00000501122 DMDP11532 3685 aa2.17□□□□□ -2.06
NEAT1-202ENST00000501122 DNAH10Q8IVF4 4471 aa2.15□□□□□ -2.07
NEAT1-202ENST00000501122 KRTAP3-3Q9BYR6 98 aa2.13□□□□□ -2.07
NEAT1-202ENST00000501122 CSMD3Q7Z407 3707 aa2.11□□□□□ -2.07
NEAT1-202ENST00000501122 DNAH2Q9P225 4427 aa2.1□□□□□ -2.07
NEAT1-202ENST00000501122 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
NEAT1-202ENST00000501122 CRCT1Q9UGL9 99 aa2.08□□□□□ -2.08
NEAT1-202ENST00000501122 VPS13CQ709C8 3753 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms