RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 FMR1Q06787 632 aaKnown RBP eCLIP4.8□□□□□ -1.641e-323■■■■■ 46
NEAT1-202ENST00000501122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.89□□□□□ -1.635e-49■■■■■ 41.8
NEAT1-202ENST00000501122 DKC1O60832 514 aaKnown RBP eCLIP5.32□□□□□ -1.561e-26■■■■■ 37.1
NEAT1-202ENST00000501122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.43□□□□□ -1.543e-42■■■■■ 35.8
NEAT1-202ENST00000501122 GTF2F1P35269 517 aaKnown RBP eCLIP5.82□□□□□ -1.482e-59■■■■■ 32.6
NEAT1-202ENST00000501122 U2AF1Q01081 240 aaKnown RBP eCLIP5.37□□□□□ -1.551e-30■■■■■ 32.2
NEAT1-202ENST00000501122 TIA1P31483 386 aaKnown RBP eCLIP4.29□□□□□ -1.723e-25■■■■■ 31.6
NEAT1-202ENST00000501122 EIF4G2P78344 907 aaKnown RBP eCLIP5.77□□□□□ -1.496e-24■■■■■ 29.2
NEAT1-202ENST00000501122 TARDBPQ13148 414 aaKnown RBP eCLIP4.74□□□□□ -1.652e-9■■■■■ 27.1
NEAT1-202ENST00000501122 SRSF7Q16629 238 aaKnown RBP eCLIP4.14□□□□□ -1.753e-32■■■■□ 25.6
NEAT1-202ENST00000501122 QKIQ96PU8 341 aaKnown RBP eCLIP5.31□□□□□ -1.564e-29■■■■□ 21.2
NEAT1-202ENST00000501122 PCBP2Q15366 365 aaKnown RBP eCLIP4.39□□□□□ -1.712e-87■■■■□ 20.9
NEAT1-202ENST00000501122 PRPF4O43172 522 aaKnown RBP eCLIP4.72□□□□□ -1.657e-48■■■■□ 20.5
NEAT1-202ENST00000501122 U2AF2P26368 475 aaKnown RBP eCLIP5.59□□□□□ -1.513e-9■■■■□ 19.9
NEAT1-202ENST00000501122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.43□□□□□ -1.542e-28■■■■□ 19.6
NEAT1-202ENST00000501122 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.41□□□□□ -1.547e-28■■■□□ 18.7
NEAT1-202ENST00000501122 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.02□□□□□ -1.611e-7■■■□□ 18.3
NEAT1-202ENST00000501122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.38□□□□□ -1.715e-27■■■□□ 17.1
NEAT1-202ENST00000501122 CDC40O60508 579 aaKnown RBP eCLIP5.11□□□□□ -1.594e-32■■■□□ 16.8
NEAT1-202ENST00000501122 HNRNPA1P09651 372 aaKnown RBP eCLIP4.46□□□□□ -1.78e-15■■■□□ 16.4
NEAT1-202ENST00000501122 FUBP3Q96I24 572 aaKnown RBP eCLIP4.29□□□□□ -1.722e-20■■■□□ 15.9
NEAT1-202ENST00000501122 XRCC6P12956 609 aaKnown RBP eCLIP5.7□□□□□ -1.57e-26■■■□□ 15.7
NEAT1-202ENST00000501122 FUSP35637 526 aaKnown RBP eCLIP3.93□□□□□ -1.782e-22■■■□□ 15.3
NEAT1-202ENST00000501122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.85□□□□□ -1.631e-57■■■□□ 15.2
NEAT1-202ENST00000501122 FTOQ9C0B1 505 aaKnown RBP eCLIP5.3□□□□□ -1.565e-89■■■□□ 15.1
NEAT1-202ENST00000501122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.23□□□□□ -1.573e-7■■■□□ 15
NEAT1-202ENST00000501122 CSTF2P33240 577 aaKnown RBP eCLIP4.88□□□□□ -1.636e-21■■■□□ 14.9
NEAT1-202ENST00000501122 NONOQ15233 471 aaKnown RBP eCLIP5.27□□□□□ -1.573e-16■■■□□ 14.9
NEAT1-202ENST00000501122 METAP2P50579 478 aaKnown RBP eCLIP5.03□□□□□ -1.66e-21■■■□□ 14.9
NEAT1-202ENST00000501122 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.83□□□□□ -1.642e-83■■□□□ 14.4
NEAT1-202ENST00000501122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.83□□□□□ -1.643e-43■■□□□ 14.3
NEAT1-202ENST00000501122 HNRNPCP07910 306 aaKnown RBP eCLIP5.49□□□□□ -1.534e-8■■□□□ 14.3
NEAT1-202ENST00000501122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.01□□□□□ -1.613e-38■■□□□ 14.2
NEAT1-202ENST00000501122 ZRANB2O95218 330 aaKnown RBP eCLIP5.53□□□□□ -1.523e-14■■□□□ 14.2
NEAT1-202ENST00000501122 AQRO60306 1485 aaKnown RBP eCLIP4.99□□□□□ -1.616e-11■■□□□ 13.9
NEAT1-202ENST00000501122 NKRFO15226 690 aaKnown RBP eCLIP4.8□□□□□ -1.641e-24■■□□□ 13.8
NEAT1-202ENST00000501122 SLBPQ14493 270 aaKnown RBP eCLIP4.4□□□□□ -1.71e-6■■□□□ 13.8
NEAT1-202ENST00000501122 BCCIPQ9P287 314 aaKnown RBP eCLIP6.12□□□□□ -1.431e-15■■□□□ 13.7
NEAT1-202ENST00000501122 EWSR1Q01844 656 aaKnown RBP eCLIP4.2□□□□□ -1.742e-15■■□□□ 13.6
NEAT1-202ENST00000501122 SF3B4Q15427 424 aaKnown RBP eCLIP4.81□□□□□ -1.644e-19■■□□□ 13.4
NEAT1-202ENST00000501122 KHSRPQ92945 711 aaKnown RBP eCLIP4.33□□□□□ -1.724e-38■■□□□ 13.3
NEAT1-202ENST00000501122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.55□□□□□ -1.523e-8■■□□□ 13.3
NEAT1-202ENST00000501122 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.31□□□□□ -1.724e-10■■□□□ 13.1
NEAT1-202ENST00000501122 SF3B1O75533 1304 aaKnown RBP eCLIP4.86□□□□□ -1.632e-6■■□□□ 13.1
NEAT1-202ENST00000501122 DDX6P26196 483 aaKnown RBP eCLIP4.98□□□□□ -1.612e-23■■□□□ 13.1
NEAT1-202ENST00000501122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.33□□□□□ -1.567e-47■■□□□ 13
NEAT1-202ENST00000501122 PTBP1P26599 531 aaKnown RBP eCLIP4.65□□□□□ -1.663e-48■■□□□ 13
NEAT1-202ENST00000501122 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.72□□□□□ -1.654e-11■■□□□ 13
NEAT1-202ENST00000501122 TIAL1Q01085 375 aaKnown RBP eCLIP4.31□□□□□ -1.722e-14■■□□□ 12.9
NEAT1-202ENST00000501122 UPF1Q92900 1129 aaKnown RBP eCLIP4.9□□□□□ -1.632e-44■■□□□ 12.6
NEAT1-202ENST00000501122 SRSF1Q07955 248 aaKnown RBP eCLIP4.08□□□□□ -1.762e-10■■□□□ 12.6
NEAT1-202ENST00000501122 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.512e-27■■□□□ 12.4
NEAT1-202ENST00000501122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.55□□□□□ -1.521e-6■■□□□ 12.3
NEAT1-202ENST00000501122 HNRNPMP52272 730 aaKnown RBP eCLIP5.26□□□□□ -1.573e-52■■□□□ 12.2
NEAT1-202ENST00000501122 MATR3P43243 847 aaKnown RBP eCLIP5.41□□□□□ -1.543e-25■■□□□ 12.1
NEAT1-202ENST00000501122 RBFOX2O43251 390 aaKnown RBP eCLIP4.35□□□□□ -1.715e-24■■□□□ 12.1
NEAT1-202ENST00000501122 NCBP2P52298 156 aaKnown RBP eCLIP4.37□□□□□ -1.712e-27■■□□□ 12
NEAT1-202ENST00000501122 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.56□□□□□ -1.684e-34■■□□□ 11.6
NEAT1-202ENST00000501122 HNRNPKP61978 463 aaKnown RBP eCLIP4.68□□□□□ -1.667e-35■■□□□ 11.4
NEAT1-202ENST00000501122 SFPQP23246 707 aaKnown RBP eCLIP5.54□□□□□ -1.525e-49■□□□□ 11
NEAT1-202ENST00000501122 AKAP1Q92667 903 aaKnown RBP eCLIP5.09□□□□□ -1.594e-18■□□□□ 10.9
NEAT1-202ENST00000501122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.38□□□□□ -1.551e-33■□□□□ 10.9
NEAT1-202ENST00000501122 TAF15Q92804 592 aaKnown RBP eCLIP4.13□□□□□ -1.753e-47■□□□□ 10.8
NEAT1-202ENST00000501122 EIF3GO75821 320 aaKnown RBP eCLIP4.57□□□□□ -1.681e-6■□□□□ 10.7
NEAT1-202ENST00000501122 AGGF1Q8N302 714 aaeCLIP5.18□□□□□ -1.586e-21■□□□□ 10.7
NEAT1-202ENST00000501122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.51□□□□□ -1.532e-12■□□□□ 10.7
NEAT1-202ENST00000501122 PUS1Q9Y606 427 aaKnown RBP eCLIP4.64□□□□□ -1.671e-9■□□□□ 10.7
NEAT1-202ENST00000501122 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.59□□□□□ -1.672e-9■□□□□ 10.7
NEAT1-202ENST00000501122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.35□□□□□ -1.556e-7■□□□□ 10.6
NEAT1-202ENST00000501122 HNRNPLP14866 589 aaKnown RBP eCLIP4.83□□□□□ -1.641e-29■□□□□ 10.6
NEAT1-202ENST00000501122 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.95□□□□□ -1.627e-8■□□□□ 10.4
NEAT1-202ENST00000501122 EIF3DO15371 548 aaKnown RBP eCLIP4.88□□□□□ -1.631e-65■□□□□ 10.3
NEAT1-202ENST00000501122 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.85□□□□□ -1.632e-51■□□□□ 10.3
NEAT1-202ENST00000501122 AATFQ9NY61 560 aaKnown RBP eCLIP5.43□□□□□ -1.543e-15■□□□□ 10.3
NEAT1-202ENST00000501122 IGF2BP3O00425 579 aaKnown RBP eCLIP5.14□□□□□ -1.592e-10■□□□□ 10.2
NEAT1-202ENST00000501122 RBM5P52756 815 aaKnown RBP eCLIP5.32□□□□□ -1.561e-45■□□□□ 10.2
NEAT1-202ENST00000501122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.83□□□□□ -1.484e-10■□□□□ 10.2
NEAT1-202ENST00000501122 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.62□□□□□ -1.671e-17■□□□□ 10.2
NEAT1-202ENST00000501122 YBX3P16989 372 aaKnown RBP eCLIP4.49□□□□□ -1.698e-13■□□□□ 10.1
NEAT1-202ENST00000501122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.11□□□□□ -1.591e-323■□□□□ 10.1
NEAT1-202ENST00000501122 AARSP49588 968 aaKnown RBP eCLIP5.06□□□□□ -1.61e-8■□□□□ 10.1
NEAT1-202ENST00000501122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.9□□□□□ -1.621e-15■□□□□ 10
NEAT1-202ENST00000501122 LSM11P83369 360 aaKnown RBP eCLIP4.33□□□□□ -1.727e-39■□□□□ 10
NEAT1-202ENST00000501122 HNRNPUQ00839 825 aaKnown RBP eCLIP6.21□□□□□ -1.427e-31■□□□□ 9.9
NEAT1-202ENST00000501122 PCBP1Q15365 356 aaKnown RBP eCLIP4.65□□□□□ -1.663e-47■□□□□ 9.9
NEAT1-202ENST00000501122 ZC3H11AO75152 810 aaKnown RBP eCLIP5.18□□□□□ -1.589e-57■□□□□ 9.8
NEAT1-202ENST00000501122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.86□□□□□ -1.633e-32■□□□□ 9.7
NEAT1-202ENST00000501122 HLTFQ14527 1009 aaKnown RBP eCLIP5.44□□□□□ -1.547e-6■□□□□ 9.7
NEAT1-202ENST00000501122 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.32□□□□□ -1.562e-16■□□□□ 9.6
NEAT1-202ENST00000501122 CPSF6Q16630 551 aaKnown RBP eCLIP4.5□□□□□ -1.692e-8■□□□□ 9.5
NEAT1-202ENST00000501122 RBM15Q96T37 977 aaKnown RBP eCLIP4.89□□□□□ -1.631e-22■□□□□ 9.5
NEAT1-202ENST00000501122 YWHAGP61981 247 aaKnown RBP eCLIP5.02□□□□□ -1.613e-6■□□□□ 9.4
NEAT1-202ENST00000501122 EIF3HO15372 352 aaKnown RBP eCLIP5.22□□□□□ -1.571e-23■□□□□ 9.2
NEAT1-202ENST00000501122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.47□□□□□ -1.534e-8■□□□□ 8.9
NEAT1-202ENST00000501122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.14□□□□□ -1.756e-35■□□□□ 8.9
NEAT1-202ENST00000501122 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.714e-33■□□□□ 8.8
NEAT1-202ENST00000501122 NIPBLQ6KC79 2804 aaeCLIP2.9□□□□□ -1.946e-7■□□□□ 8.7
NEAT1-202ENST00000501122 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.65□□□□□ -1.664e-61■□□□□ 8.7
NEAT1-202ENST00000501122 DDX21Q9NR30 783 aaKnown RBP eCLIP5.35□□□□□ -1.551e-323■□□□□ 8.5
NEAT1-202ENST00000501122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.47□□□□□ -1.533e-24■□□□□ 8.4
Retrieved 100 of 105 RNA–protein pairs in 20.2 ms