RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 ASPMQ8IZT6 3477 aa1.77□□□□□ -2.13
CTNNB1-215ENST00000488914 MYO18BQ8IUG5 2567 aa1.77□□□□□ -2.13
CTNNB1-215ENST00000488914 DNHD1Q96M86 4753 aa1.76□□□□□ -2.13
CTNNB1-215ENST00000488914 ZFYVE26Q68DK2 2539 aa1.76□□□□□ -2.13
CTNNB1-215ENST00000488914 J3QKU1 62 aa1.76□□□□□ -2.13
CTNNB1-215ENST00000488914 USF3Q68DE3 2245 aa1.76□□□□□ -2.13
CTNNB1-215ENST00000488914 ITPR3Q14573 2671 aa1.75□□□□□ -2.13
CTNNB1-215ENST00000488914 FBN3Q75N90 2809 aa1.75□□□□□ -2.13
CTNNB1-215ENST00000488914 SPTBN2O15020 2390 aa1.75□□□□□ -2.13
CTNNB1-215ENST00000488914 CEP250Q9BV73 2442 aa1.74□□□□□ -2.13
CTNNB1-215ENST00000488914 SPEGQ15772 3267 aa1.74□□□□□ -2.13
CTNNB1-215ENST00000488914 KALRNO60229 2985 aa1.74□□□□□ -2.13
CTNNB1-215ENST00000488914 MYO15AQ9UKN7 3530 aa1.74□□□□□ -2.13
CTNNB1-215ENST00000488914 HELZ2Q9BYK8 2649 aaKnown RBP1.73□□□□□ -2.13
CTNNB1-215ENST00000488914 DMDP11532 3685 aa1.73□□□□□ -2.13
CTNNB1-215ENST00000488914 C2CD3Q4AC94 2353 aa1.72□□□□□ -2.13
CTNNB1-215ENST00000488914 DEFB110Q30KQ9 67 aa1.72□□□□□ -2.13
CTNNB1-215ENST00000488914 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
CTNNB1-215ENST00000488914 DMXL1Q9Y485 3027 aa1.72□□□□□ -2.13
CTNNB1-215ENST00000488914 GVINP1Q7Z2Y8 2422 aa1.72□□□□□ -2.13
CTNNB1-215ENST00000488914 CACNA1HO95180 2353 aa1.72□□□□□ -2.13
CTNNB1-215ENST00000488914 SMG1Q96Q15 3661 aaKnown RBP1.72□□□□□ -2.13
CTNNB1-215ENST00000488914 HECTD1Q9ULT8 2610 aa1.71□□□□□ -2.13
CTNNB1-215ENST00000488914 DSPP15924 2871 aaKnown RBP1.71□□□□□ -2.14
CTNNB1-215ENST00000488914 FRYQ5TBA9 3013 aa1.71□□□□□ -2.14
CTNNB1-215ENST00000488914 UBR5O95071 2799 aaPredicted RBP1.7□□□□□ -2.14
CTNNB1-215ENST00000488914 FBN2P35556 2912 aa1.7□□□□□ -2.14
CTNNB1-215ENST00000488914 RELNP78509 3460 aa1.7□□□□□ -2.14
CTNNB1-215ENST00000488914 EP300Q09472 2414 aaPredicted RBP1.7□□□□□ -2.14
CTNNB1-215ENST00000488914 ZZEF1O43149 2961 aa1.69□□□□□ -2.14
CTNNB1-215ENST00000488914 TEX15Q9BXT5 2789 aa1.69□□□□□ -2.14
CTNNB1-215ENST00000488914 MYO9AB2RTY4 2548 aa1.68□□□□□ -2.14
CTNNB1-215ENST00000488914 SPTAN1Q13813 2472 aaKnown RBP1.67□□□□□ -2.14
CTNNB1-215ENST00000488914 POLQO75417 2590 aa1.67□□□□□ -2.14
CTNNB1-215ENST00000488914 CREBBPQ92793 2442 aa1.67□□□□□ -2.14
CTNNB1-215ENST00000488914 VPS13AQ96RL7 3174 aa1.67□□□□□ -2.14
CTNNB1-215ENST00000488914 LOC400499M0QZD8 3231 aa1.67□□□□□ -2.14
CTNNB1-215ENST00000488914 ABCA2Q9BZC7 2435 aa1.67□□□□□ -2.14
CTNNB1-215ENST00000488914 TENM4Q6N022 2769 aa1.66□□□□□ -2.14
CTNNB1-215ENST00000488914 CFAP46Q8IYW2 2715 aa1.66□□□□□ -2.14
CTNNB1-215ENST00000488914 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
CTNNB1-215ENST00000488914 NBPF19A0A087WUL8 3843 aa1.66□□□□□ -2.14
CTNNB1-215ENST00000488914 CELSR3Q9NYQ7 3312 aa1.66□□□□□ -2.14
CTNNB1-215ENST00000488914 NBEAQ8NFP9 2946 aa1.66□□□□□ -2.14
CTNNB1-215ENST00000488914 SPTA1P02549 2419 aa1.66□□□□□ -2.14
CTNNB1-215ENST00000488914 TRIOO75962 3097 aa1.65□□□□□ -2.14
CTNNB1-215ENST00000488914 M0QZ58 72 aa1.65□□□□□ -2.15
CTNNB1-215ENST00000488914 RP1L1Q8IWN7 2480 aaPredicted RBP1.65□□□□□ -2.15
CTNNB1-215ENST00000488914 CELSR2Q9HCU4 2923 aa1.64□□□□□ -2.15
CTNNB1-215ENST00000488914 SPG11Q96JI7 2443 aa1.64□□□□□ -2.15
CTNNB1-215ENST00000488914 FREM2Q5SZK8 3169 aa1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 CSPG4Q6UVK1 2322 aa1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 SPTBN1Q01082 2364 aaKnown RBP1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 DEFB133Q30KQ1 61 aa1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 MEGF8Q7Z7M0 2845 aa1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 CHD7Q9P2D1 2997 aa1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 CHD9Q3L8U1 2897 aa1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 COL12A1Q99715 3063 aa1.63□□□□□ -2.15
CTNNB1-215ENST00000488914 WDR87Q6ZQQ6 2873 aa1.62□□□□□ -2.15
CTNNB1-215ENST00000488914 IGSF10Q6WRI0 2623 aa1.62□□□□□ -2.15
CTNNB1-215ENST00000488914 WDFY3Q8IZQ1 3526 aa1.62□□□□□ -2.15
CTNNB1-215ENST00000488914 SETD2Q9BYW2 2564 aaPredicted RBP1.61□□□□□ -2.15
CTNNB1-215ENST00000488914 DMXL2Q8TDJ6 3036 aa1.61□□□□□ -2.15
CTNNB1-215ENST00000488914 DEFB108BQ8NET1 73 aa1.61□□□□□ -2.15
CTNNB1-215ENST00000488914 LAMA5O15230 3695 aa1.61□□□□□ -2.15
CTNNB1-215ENST00000488914 ITPR1Q14643 2758 aa1.6□□□□□ -2.15
CTNNB1-215ENST00000488914 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
CTNNB1-215ENST00000488914 RHPN1-AS1Q9BWJ2 59 aa1.6□□□□□ -2.15
CTNNB1-215ENST00000488914 U3KQA8 63 aa1.6□□□□□ -2.15
CTNNB1-215ENST00000488914 BIRC6Q9NR09 4857 aa1.59□□□□□ -2.15
CTNNB1-215ENST00000488914 APELAP0DMC3 54 aa1.59□□□□□ -2.15
CTNNB1-215ENST00000488914 FRYLO94915 3013 aa1.58□□□□□ -2.16
CTNNB1-215ENST00000488914 H3BUX3 64 aa1.58□□□□□ -2.16
CTNNB1-215ENST00000488914 TLN1Q9Y490 2541 aaKnown RBP1.57□□□□□ -2.16
CTNNB1-215ENST00000488914 WNK1Q9H4A3 2382 aa1.57□□□□□ -2.16
CTNNB1-215ENST00000488914 RYR3Q15413 4870 aa1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 NBEAL1Q6ZS30 2694 aa1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 BOD1L1Q8NFC6 3051 aa1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 F8P00451 2351 aa1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 NF1P21359 2839 aa1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 SPENQ96T58 3664 aaKnown RBP1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 LRRK2Q5S007 2527 aa1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
CTNNB1-215ENST00000488914 CEP295Q9C0D2 2601 aa1.55□□□□□ -2.16
CTNNB1-215ENST00000488914 PCLOQ9Y6V0 5065 aa1.55□□□□□ -2.16
CTNNB1-215ENST00000488914 AKAP13Q12802 2813 aa1.55□□□□□ -2.16
CTNNB1-215ENST00000488914 ATRQ13535 2644 aa1.55□□□□□ -2.16
CTNNB1-215ENST00000488914 PDZD2O15018 2839 aa1.55□□□□□ -2.16
CTNNB1-215ENST00000488914 NBEAL2Q6ZNJ1 2754 aa1.54□□□□□ -2.16
CTNNB1-215ENST00000488914 CELSR1Q9NYQ6 3014 aa1.54□□□□□ -2.16
CTNNB1-215ENST00000488914 AKAP6Q13023 2319 aa1.54□□□□□ -2.16
CTNNB1-215ENST00000488914 NOTCH1P46531 2555 aa1.53□□□□□ -2.16
CTNNB1-215ENST00000488914 EPPK1P58107 5090 aaKnown RBP1.53□□□□□ -2.16
CTNNB1-215ENST00000488914 FLNCQ14315 2725 aa1.53□□□□□ -2.16
CTNNB1-215ENST00000488914 HIVEP3Q5T1R4 2406 aa1.53□□□□□ -2.16
CTNNB1-215ENST00000488914 CSMD1Q96PZ7 3565 aa1.53□□□□□ -2.17
CTNNB1-215ENST00000488914 ITPR2Q14571 2701 aa1.53□□□□□ -2.17
CTNNB1-215ENST00000488914 RYR1P21817 5038 aa1.52□□□□□ -2.17
CTNNB1-215ENST00000488914 HYDINQ4G0P3 5121 aa1.52□□□□□ -2.17
CTNNB1-215ENST00000488914 PRRC2CQ9Y520 2896 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms