RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ATP11AUNQ6ZP68 121 aa7.72□□□□□ -1.17
PDZRN3-205ENST00000466780 CDK2AP2O75956 126 aa7.72□□□□□ -1.17
PDZRN3-205ENST00000466780 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
PDZRN3-205ENST00000466780 ZNF706Q9Y5V0 76 aaPredicted RBP7.71□□□□□ -1.18
PDZRN3-205ENST00000466780 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
PDZRN3-205ENST00000466780 FRAS1Q86XX4 4008 aa7.7□□□□□ -1.18
PDZRN3-205ENST00000466780 IGLV5-52A0A0A0MRZ9 124 aa7.69□□□□□ -1.18
PDZRN3-205ENST00000466780 A6NN06 94 aa7.68□□□□□ -1.18
PDZRN3-205ENST00000466780 Q5W150 140 aa7.68□□□□□ -1.18
PDZRN3-205ENST00000466780 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
PDZRN3-205ENST00000466780 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
PDZRN3-205ENST00000466780 A0A087WTM6 91 aa7.66□□□□□ -1.18
PDZRN3-205ENST00000466780 SPINK7P58062 85 aa7.66□□□□□ -1.18
PDZRN3-205ENST00000466780 HECTD4Q9Y4D8 3996 aa7.66□□□□□ -1.18
PDZRN3-205ENST00000466780 VPS13DQ5THJ4 4388 aa7.66□□□□□ -1.18
PDZRN3-205ENST00000466780 STARD9Q9P2P6 4700 aa7.66□□□□□ -1.18
PDZRN3-205ENST00000466780 ZNF861PO60384 105 aa7.66□□□□□ -1.18
PDZRN3-205ENST00000466780 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
PDZRN3-205ENST00000466780 RTL8CO15255 209 aa7.63□□□□□ -1.19
PDZRN3-205ENST00000466780 PRR26Q8N8Z3 221 aa7.63□□□□□ -1.19
PDZRN3-205ENST00000466780 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
PDZRN3-205ENST00000466780 PRKDCP78527 4128 aaKnown RBP7.61□□□□□ -1.19
PDZRN3-205ENST00000466780 ALMS1Q8TCU4 4167 aa7.59□□□□□ -1.2
PDZRN3-205ENST00000466780 TGP01266 2768 aa7.58□□□□□ -1.2
PDZRN3-205ENST00000466780 CIRBP-AS1Q8TBR5 109 aa7.58□□□□□ -1.2
PDZRN3-205ENST00000466780 MEGF8Q7Z7M0 2845 aa7.57□□□□□ -1.2
PDZRN3-205ENST00000466780 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
PDZRN3-205ENST00000466780 DNAH2Q9P225 4427 aa7.57□□□□□ -1.2
PDZRN3-205ENST00000466780 KMT2AQ03164 3969 aa7.56□□□□□ -1.2
PDZRN3-205ENST00000466780 IGLV7-43P04211 117 aa7.55□□□□□ -1.2
PDZRN3-205ENST00000466780 FBN3Q75N90 2809 aa7.54□□□□□ -1.2
PDZRN3-205ENST00000466780 ACYP2P14621 99 aa7.54□□□□□ -1.2
PDZRN3-205ENST00000466780 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
PDZRN3-205ENST00000466780 C8orf87E5RJ46 101 aa7.52□□□□□ -1.21
PDZRN3-205ENST00000466780 DMAC1Q96GE9 116 aa7.52□□□□□ -1.21
PDZRN3-205ENST00000466780 C1orf134Q5TEV5 83 aa7.51□□□□□ -1.21
PDZRN3-205ENST00000466780 LY6G6CO95867 125 aa7.5□□□□□ -1.21
PDZRN3-205ENST00000466780 RETNLBQ9BQ08 111 aa7.49□□□□□ -1.21
PDZRN3-205ENST00000466780 SSBP3-AS1Q7Z2R9 100 aa7.49□□□□□ -1.21
PDZRN3-205ENST00000466780 LINC00313P59037 77 aa7.48□□□□□ -1.21
PDZRN3-205ENST00000466780 DNHD1Q96M86 4753 aa7.47□□□□□ -1.21
PDZRN3-205ENST00000466780 FAM229AH3BQW9 127 aa7.46□□□□□ -1.22
PDZRN3-205ENST00000466780 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
PDZRN3-205ENST00000466780 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
PDZRN3-205ENST00000466780 DNAH6Q9C0G6 4158 aa7.43□□□□□ -1.22
PDZRN3-205ENST00000466780 KRTAP13-2Q52LG2 175 aa7.42□□□□□ -1.22
PDZRN3-205ENST00000466780 A0A1B0GU69 56 aa7.41□□□□□ -1.22
PDZRN3-205ENST00000466780 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
PDZRN3-205ENST00000466780 DNAH5Q8TE73 4624 aa7.4□□□□□ -1.23
PDZRN3-205ENST00000466780 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
PDZRN3-205ENST00000466780 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
PDZRN3-205ENST00000466780 PRAC1Q96KF2 57 aa7.36□□□□□ -1.23
PDZRN3-205ENST00000466780 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
PDZRN3-205ENST00000466780 LRP1BQ9NZR2 4599 aa7.33□□□□□ -1.24
PDZRN3-205ENST00000466780 IGKV2D-30A0A075B6S6 120 aa7.33□□□□□ -1.24
PDZRN3-205ENST00000466780 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
PDZRN3-205ENST00000466780 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
PDZRN3-205ENST00000466780 UQCR11O14957 56 aa7.29□□□□□ -1.24
PDZRN3-205ENST00000466780 KRTAP1-4P0C5Y4 121 aa7.29□□□□□ -1.24
PDZRN3-205ENST00000466780 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
PDZRN3-205ENST00000466780 Q6ZSA8 131 aa7.25□□□□□ -1.25
PDZRN3-205ENST00000466780 HYDINQ4G0P3 5121 aa7.24□□□□□ -1.25
PDZRN3-205ENST00000466780 PKD1P98161 4303 aa7.23□□□□□ -1.25
PDZRN3-205ENST00000466780 VPS13BQ7Z7G8 4022 aa7.22□□□□□ -1.25
PDZRN3-205ENST00000466780 Q8N1X5 172 aa7.2□□□□□ -1.26
PDZRN3-205ENST00000466780 SPINK1P00995 79 aa7.19□□□□□ -1.26
PDZRN3-205ENST00000466780 FAT2Q9NYQ8 4349 aa7.18□□□□□ -1.26
PDZRN3-205ENST00000466780 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
PDZRN3-205ENST00000466780 TYMSOSQ8TAI1 123 aa7.16□□□□□ -1.26
PDZRN3-205ENST00000466780 LINC01554Q52M75 96 aa7.14□□□□□ -1.27
PDZRN3-205ENST00000466780 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
PDZRN3-205ENST00000466780 H0YAA0 97 aa7.06□□□□□ -1.28
PDZRN3-205ENST00000466780 LINC00304Q8N9R0 145 aa7.06□□□□□ -1.28
PDZRN3-205ENST00000466780 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
PDZRN3-205ENST00000466780 SMR3BP02814 79 aaPredicted RBP7.05□□□□□ -1.28
PDZRN3-205ENST00000466780 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
PDZRN3-205ENST00000466780 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
PDZRN3-205ENST00000466780 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
PDZRN3-205ENST00000466780 C9orf92A6NGG3 77 aa7□□□□□ -1.29
PDZRN3-205ENST00000466780 A8MUU9 505 aa7□□□□□ -1.29
PDZRN3-205ENST00000466780 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
PDZRN3-205ENST00000466780 A0A1B0GU33 70 aa6.96□□□□□ -1.29
PDZRN3-205ENST00000466780 DYNC1H1Q14204 4646 aaKnown RBP6.95□□□□□ -1.3
PDZRN3-205ENST00000466780 PKHD1L1Q86WI1 4243 aa6.95□□□□□ -1.3
PDZRN3-205ENST00000466780 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
PDZRN3-205ENST00000466780 KRTAP21-3Q3LHN1 58 aa6.93□□□□□ -1.3
PDZRN3-205ENST00000466780 FAT1Q14517 4588 aa6.93□□□□□ -1.3
PDZRN3-205ENST00000466780 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
PDZRN3-205ENST00000466780 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
PDZRN3-205ENST00000466780 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
PDZRN3-205ENST00000466780 KRTAP10-4P60372 401 aaPredicted RBP6.84□□□□□ -1.32
PDZRN3-205ENST00000466780 COX6B2Q6YFQ2 88 aa6.84□□□□□ -1.32
PDZRN3-205ENST00000466780 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
PDZRN3-205ENST00000466780 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
PDZRN3-205ENST00000466780 RYR2Q92736 4967 aa6.76□□□□□ -1.33
PDZRN3-205ENST00000466780 KMT2CQ8NEZ4 4911 aaKnown RBP6.75□□□□□ -1.33
PDZRN3-205ENST00000466780 H3BS24 57 aa6.74□□□□□ -1.33
PDZRN3-205ENST00000466780 K7ERS5 55 aa6.74□□□□□ -1.33
PDZRN3-205ENST00000466780 KRTAP10-6P60371 365 aaPredicted RBP6.72□□□□□ -1.33
PDZRN3-205ENST00000466780 KRTAP3-3Q9BYR6 98 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms