RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ANAPC11Q9NYG5 84 aa1.97□□□□□ -2.09
HMGN1P18-201ENST00000457642 LY6G6CO95867 125 aa1.96□□□□□ -2.1
HMGN1P18-201ENST00000457642 Q5W150 140 aa1.96□□□□□ -2.1
HMGN1P18-201ENST00000457642 LCA10Q71F78 164 aa1.96□□□□□ -2.1
HMGN1P18-201ENST00000457642 DMAC1Q96GE9 116 aa1.96□□□□□ -2.1
HMGN1P18-201ENST00000457642 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
HMGN1P18-201ENST00000457642 STAB2Q8WWQ8 2551 aa1.96□□□□□ -2.1
HMGN1P18-201ENST00000457642 MGAM2Q2M2H8 2515 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 ANK2Q01484 3957 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 COL6A5A8TX70 2615 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 A0A087X002 238 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 A0A1B0GU69 56 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 A6NN06 94 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 IGKV2-30P06310 120 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 NOTCH2NLQ7Z3S9 236 aa1.95□□□□□ -2.1
HMGN1P18-201ENST00000457642 DNAH9Q9NYC9 4486 aa1.94□□□□□ -2.1
HMGN1P18-201ENST00000457642 SPINK7P58062 85 aa1.94□□□□□ -2.1
HMGN1P18-201ENST00000457642 KRTAP13-3Q3SY46 172 aa1.94□□□□□ -2.1
HMGN1P18-201ENST00000457642 PRR26Q8N8Z3 221 aa1.94□□□□□ -2.1
HMGN1P18-201ENST00000457642 IGKV2D-30A0A075B6S6 120 aa1.93□□□□□ -2.1
HMGN1P18-201ENST00000457642 UQCR11O14957 56 aa1.93□□□□□ -2.1
HMGN1P18-201ENST00000457642 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
HMGN1P18-201ENST00000457642 DNAH10Q8IVF4 4471 aa1.93□□□□□ -2.1
HMGN1P18-201ENST00000457642 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
HMGN1P18-201ENST00000457642 A8MU10 97 aa1.92□□□□□ -2.1
HMGN1P18-201ENST00000457642 SPINK1P00995 79 aa1.92□□□□□ -2.1
HMGN1P18-201ENST00000457642 MIR22HGQ0VDD5 57 aa1.92□□□□□ -2.1
HMGN1P18-201ENST00000457642 TYMSOSQ8TAI1 123 aa1.92□□□□□ -2.1
HMGN1P18-201ENST00000457642 RBM12B-AS1Q9P1G2 102 aa1.92□□□□□ -2.1
HMGN1P18-201ENST00000457642 VPS13DQ5THJ4 4388 aa1.92□□□□□ -2.1
HMGN1P18-201ENST00000457642 DNAH17Q9UFH2 4485 aa1.91□□□□□ -2.1
HMGN1P18-201ENST00000457642 RPS29P62273 56 aaKnown RBP1.91□□□□□ -2.1
HMGN1P18-201ENST00000457642 KRTAP13-2Q52LG2 175 aa1.91□□□□□ -2.1
HMGN1P18-201ENST00000457642 PLECQ15149 4684 aaKnown RBP1.9□□□□□ -2.1
HMGN1P18-201ENST00000457642 KRTAP16-1A8MUX0 517 aa1.9□□□□□ -2.11
HMGN1P18-201ENST00000457642 PLA2G1BP04054 148 aaKnown RBP1.9□□□□□ -2.11
HMGN1P18-201ENST00000457642 KRTAP10-2P60368 255 aa1.9□□□□□ -2.11
HMGN1P18-201ENST00000457642 SPATA8Q6RVD6 105 aa1.9□□□□□ -2.11
HMGN1P18-201ENST00000457642 Q6ZSA8 131 aa1.9□□□□□ -2.11
HMGN1P18-201ENST00000457642 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
HMGN1P18-201ENST00000457642 KRTAP10-1P60331 282 aa1.89□□□□□ -2.11
HMGN1P18-201ENST00000457642 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
HMGN1P18-201ENST00000457642 DNAH8Q96JB1 4490 aa1.88□□□□□ -2.11
HMGN1P18-201ENST00000457642 KRTAP1-4P0C5Y4 121 aa1.88□□□□□ -2.11
HMGN1P18-201ENST00000457642 DNAH6Q9C0G6 4158 aa1.88□□□□□ -2.11
HMGN1P18-201ENST00000457642 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
HMGN1P18-201ENST00000457642 ALMS1Q8TCU4 4167 aa1.87□□□□□ -2.11
HMGN1P18-201ENST00000457642 K7ERS5 55 aa1.86□□□□□ -2.11
HMGN1P18-201ENST00000457642 DNAH2Q9P225 4427 aa1.86□□□□□ -2.11
HMGN1P18-201ENST00000457642 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
HMGN1P18-201ENST00000457642 HECTD4Q9Y4D8 3996 aa1.85□□□□□ -2.11
HMGN1P18-201ENST00000457642 STARD9Q9P2P6 4700 aa1.85□□□□□ -2.11
HMGN1P18-201ENST00000457642 Q8N1X5 172 aa1.85□□□□□ -2.11
HMGN1P18-201ENST00000457642 COL7A1Q02388 2944 aa1.85□□□□□ -2.11
HMGN1P18-201ENST00000457642 LYSTQ99698 3801 aa1.85□□□□□ -2.11
HMGN1P18-201ENST00000457642 PRKDCP78527 4128 aaKnown RBP1.85□□□□□ -2.11
HMGN1P18-201ENST00000457642 A8MUU9 505 aa1.84□□□□□ -2.11
HMGN1P18-201ENST00000457642 LINC01554Q52M75 96 aa1.84□□□□□ -2.11
HMGN1P18-201ENST00000457642 PRAC1Q96KF2 57 aa1.84□□□□□ -2.11
HMGN1P18-201ENST00000457642 C20orf166-AS1Q96NR2 134 aa1.84□□□□□ -2.11
HMGN1P18-201ENST00000457642 A0A1B0GU33 70 aa1.83□□□□□ -2.12
HMGN1P18-201ENST00000457642 C9orf92A6NGG3 77 aa1.83□□□□□ -2.12
HMGN1P18-201ENST00000457642 MEGF8Q7Z7M0 2845 aa1.83□□□□□ -2.12
HMGN1P18-201ENST00000457642 CSMD3Q7Z407 3707 aa1.82□□□□□ -2.12
HMGN1P18-201ENST00000457642 DNAH11Q96DT5 4516 aa1.82□□□□□ -2.12
HMGN1P18-201ENST00000457642 H1FX-AS1Q4G0G2 97 aa1.82□□□□□ -2.12
HMGN1P18-201ENST00000457642 DNAH5Q8TE73 4624 aa1.82□□□□□ -2.12
HMGN1P18-201ENST00000457642 COX6B2Q6YFQ2 88 aa1.81□□□□□ -2.12
HMGN1P18-201ENST00000457642 ADM2Q7Z4H4 148 aa1.81□□□□□ -2.12
HMGN1P18-201ENST00000457642 TGP01266 2768 aa1.81□□□□□ -2.12
HMGN1P18-201ENST00000457642 SMR3BP02814 79 aaPredicted RBP1.8□□□□□ -2.12
HMGN1P18-201ENST00000457642 CSAG1Q6PB30 78 aa1.8□□□□□ -2.12
HMGN1P18-201ENST00000457642 FRAS1Q86XX4 4008 aa1.8□□□□□ -2.12
HMGN1P18-201ENST00000457642 H0YAA0 97 aa1.79□□□□□ -2.12
HMGN1P18-201ENST00000457642 KRTAP21-3Q3LHN1 58 aa1.79□□□□□ -2.12
HMGN1P18-201ENST00000457642 KMT2AQ03164 3969 aa1.79□□□□□ -2.12
HMGN1P18-201ENST00000457642 SACSQ9NZJ4 4579 aa1.78□□□□□ -2.12
HMGN1P18-201ENST00000457642 FBN3Q75N90 2809 aa1.77□□□□□ -2.13
HMGN1P18-201ENST00000457642 KRTAP25-1Q3LHN0 102 aa1.77□□□□□ -2.13
HMGN1P18-201ENST00000457642 LRP1BQ9NZR2 4599 aa1.77□□□□□ -2.13
HMGN1P18-201ENST00000457642 A0A1B0GVY2 172 aa1.76□□□□□ -2.13
HMGN1P18-201ENST00000457642 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
HMGN1P18-201ENST00000457642 KRTAP3-1Q9BYR8 98 aa1.76□□□□□ -2.13
HMGN1P18-201ENST00000457642 S4R3F8 94 aa1.76□□□□□ -2.13
HMGN1P18-201ENST00000457642 PKD1P98161 4303 aa1.75□□□□□ -2.13
HMGN1P18-201ENST00000457642 FAT2Q9NYQ8 4349 aa1.75□□□□□ -2.13
HMGN1P18-201ENST00000457642 KRTAP10-4P60372 401 aaPredicted RBP1.75□□□□□ -2.13
HMGN1P18-201ENST00000457642 ROMO1P60602 79 aa1.75□□□□□ -2.13
HMGN1P18-201ENST00000457642 VPS13BQ7Z7G8 4022 aa1.74□□□□□ -2.13
HMGN1P18-201ENST00000457642 Q5VSD8 79 aa1.73□□□□□ -2.13
HMGN1P18-201ENST00000457642 DYNC1H1Q14204 4646 aaKnown RBP1.73□□□□□ -2.13
HMGN1P18-201ENST00000457642 PKHD1L1Q86WI1 4243 aa1.73□□□□□ -2.13
HMGN1P18-201ENST00000457642 A0A0D9SG42 100 aa1.72□□□□□ -2.13
HMGN1P18-201ENST00000457642 XP32Q5T750 250 aa1.72□□□□□ -2.13
HMGN1P18-201ENST00000457642 APOBP04114 4563 aaKnown RBP1.72□□□□□ -2.13
HMGN1P18-201ENST00000457642 KRTAP10-8P60410 259 aa1.71□□□□□ -2.14
HMGN1P18-201ENST00000457642 CRIPTQ9P021 101 aa1.71□□□□□ -2.14
HMGN1P18-201ENST00000457642 FLG2Q5D862 2391 aaPredicted RBP1.71□□□□□ -2.14
HMGN1P18-201ENST00000457642 HYDINQ4G0P3 5121 aa1.7□□□□□ -2.14
HMGN1P18-201ENST00000457642 H3BS24 57 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms