RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NISCHQ9Y2I1 1504 aa6.71□□□□□ -1.33
HMGN1P18-201ENST00000457642 CCDC180Q9P1Z9 1646 aa5.77□□□□□ -1.49
HMGN1P18-201ENST00000457642 ZCCHC6Q5VYS8 1495 aaKnown RBP5.71□□□□□ -1.5
HMGN1P18-201ENST00000457642 SHROOM4Q9ULL8 1493 aa5.69□□□□□ -1.5
HMGN1P18-201ENST00000457642 SUPT5HO00267 1087 aaKnown RBP5.62□□□□□ -1.51
HMGN1P18-201ENST00000457642 DCAF1Q9Y4B6 1507 aa5.57□□□□□ -1.52
HMGN1P18-201ENST00000457642 DCAF8L2P0C7V8 631 aa5.5□□□□□ -1.53
HMGN1P18-201ENST00000457642 CHIC1Q5VXU3 224 aa5.48□□□□□ -1.53
HMGN1P18-201ENST00000457642 MYO15BQ96JP2 1530 aa5.43□□□□□ -1.54
HMGN1P18-201ENST00000457642 HRCP23327 699 aa5.42□□□□□ -1.54
HMGN1P18-201ENST00000457642 ABCC9O60706 1549 aa5.41□□□□□ -1.54
HMGN1P18-201ENST00000457642 PCGF6Q9BYE7 350 aa5.35□□□□□ -1.55
HMGN1P18-201ENST00000457642 SCRIBQ14160 1630 aa5.34□□□□□ -1.55
HMGN1P18-201ENST00000457642 NACADO15069 1562 aa5.31□□□□□ -1.56
HMGN1P18-201ENST00000457642 RB1CC1Q8TDY2 1594 aa5.31□□□□□ -1.56
HMGN1P18-201ENST00000457642 TRIM26Q12899 539 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P18-201ENST00000457642 ZEB1P37275 1124 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P18-201ENST00000457642 RSF1Q96T23 1441 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P18-201ENST00000457642 TRIM41Q8WV44 630 aa5.27□□□□□ -1.57
HMGN1P18-201ENST00000457642 LOC105371045A0A1W2PR82 267 aa5.26□□□□□ -1.57
HMGN1P18-201ENST00000457642 BAZ1AQ9NRL2 1556 aaPredicted RBP5.21□□□□□ -1.58
HMGN1P18-201ENST00000457642 PPARGC1BQ86YN6 1023 aaKnown RBP5.19□□□□□ -1.58
HMGN1P18-201ENST00000457642 MROH2BQ7Z745 1585 aa5.18□□□□□ -1.58
HMGN1P18-201ENST00000457642 FAM9AQ8IZU1 332 aaPredicted RBP5.17□□□□□ -1.58
HMGN1P18-201ENST00000457642 WIZO95785 1651 aa5.16□□□□□ -1.58
HMGN1P18-201ENST00000457642 CECR2Q9BXF3 1484 aa5.16□□□□□ -1.58
HMGN1P18-201ENST00000457642 TOP2AP11388 1531 aaKnown RBP5.16□□□□□ -1.58
HMGN1P18-201ENST00000457642 EIF4G1Q04637 1599 aaKnown RBP5.13□□□□□ -1.59
HMGN1P18-201ENST00000457642 PELP1Q8IZL8 1130 aaKnown RBP5.13□□□□□ -1.59
HMGN1P18-201ENST00000457642 EEA1Q15075 1411 aa5.13□□□□□ -1.59
HMGN1P18-201ENST00000457642 SMARCA4P51532 1647 aa5.12□□□□□ -1.59
HMGN1P18-201ENST00000457642 WRNQ14191 1432 aaPredicted RBP eCLIP5.09□□□□□ -1.59
HMGN1P18-201ENST00000457642 EHMT2Q96KQ7 1210 aa5.09□□□□□ -1.59
HMGN1P18-201ENST00000457642 SMARCA2P51531 1590 aa5.08□□□□□ -1.6
HMGN1P18-201ENST00000457642 CCER1Q8TC90 406 aaPredicted RBP5.08□□□□□ -1.6
HMGN1P18-201ENST00000457642 CCDC88BA6NC98 1476 aa5.07□□□□□ -1.6
HMGN1P18-201ENST00000457642 TNIKQ9UKE5 1360 aa5.07□□□□□ -1.6
HMGN1P18-201ENST00000457642 CEP162Q5TB80 1403 aa5.06□□□□□ -1.6
HMGN1P18-201ENST00000457642 UNC13AQ9UPW8 1703 aa5.06□□□□□ -1.6
HMGN1P18-201ENST00000457642 GOLGA3Q08378 1498 aa5.06□□□□□ -1.6
HMGN1P18-201ENST00000457642 ABCC8Q09428 1581 aa5.05□□□□□ -1.6
HMGN1P18-201ENST00000457642 CENPBP07199 599 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P18-201ENST00000457642 CEP164Q9UPV0 1460 aa5.03□□□□□ -1.6
HMGN1P18-201ENST00000457642 CSRNP3Q8WYN3 585 aa5.03□□□□□ -1.6
HMGN1P18-201ENST00000457642 PEG3Q9GZU2 1588 aa5.03□□□□□ -1.6
HMGN1P18-201ENST00000457642 KIF21BO75037 1637 aa5.02□□□□□ -1.61
HMGN1P18-201ENST00000457642 UBTFP17480 764 aaKnown RBP5.02□□□□□ -1.61
HMGN1P18-201ENST00000457642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.01□□□□□ -1.61
HMGN1P18-201ENST00000457642 APLP2Q06481 763 aa5.01□□□□□ -1.61
HMGN1P18-201ENST00000457642 BAZ1BQ9UIG0 1483 aaKnown RBP5□□□□□ -1.61
HMGN1P18-201ENST00000457642 SOGA1O94964 1423 aa5□□□□□ -1.61
HMGN1P18-201ENST00000457642 DIEXFQ68CQ4 756 aaKnown RBP4.99□□□□□ -1.61
HMGN1P18-201ENST00000457642 BICRAQ9NZM4 1560 aa4.98□□□□□ -1.61
HMGN1P18-201ENST00000457642 SCAF1Q9H7N4 1312 aaKnown RBP4.97□□□□□ -1.61
HMGN1P18-201ENST00000457642 ACIN1Q9UKV3 1341 aaKnown RBP4.97□□□□□ -1.61
HMGN1P18-201ENST00000457642 CLIP1P30622 1438 aa4.97□□□□□ -1.61
HMGN1P18-201ENST00000457642 VPS8Q8N3P4 1428 aa4.97□□□□□ -1.61
HMGN1P18-201ENST00000457642 TTBK1Q5TCY1 1321 aaPredicted RBP4.97□□□□□ -1.61
HMGN1P18-201ENST00000457642 SYNJ1O43426 1573 aa4.96□□□□□ -1.62
HMGN1P18-201ENST00000457642 ATAD2BQ9ULI0 1458 aa4.96□□□□□ -1.62
HMGN1P18-201ENST00000457642 ZNF316A6NFI3 1004 aaPredicted RBP4.95□□□□□ -1.62
HMGN1P18-201ENST00000457642 ERICH3Q5RHP9 1530 aa4.94□□□□□ -1.62
HMGN1P18-201ENST00000457642 RUSC2Q8N2Y8 1516 aa4.94□□□□□ -1.62
HMGN1P18-201ENST00000457642 MYT1Q01538 1121 aa4.94□□□□□ -1.62
HMGN1P18-201ENST00000457642 PABPN1Q86U42 306 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGN1P18-201ENST00000457642 TOP2BQ02880 1626 aa4.94□□□□□ -1.62
HMGN1P18-201ENST00000457642 BIVM-ERCC5R4GMW8 1640 aa4.93□□□□□ -1.62
HMGN1P18-201ENST00000457642 CLSPNQ9HAW4 1339 aa4.92□□□□□ -1.62
HMGN1P18-201ENST00000457642 HMGXB3Q12766 1538 aa4.92□□□□□ -1.62
HMGN1P18-201ENST00000457642 HNRNPUL2Q1KMD3 747 aaKnown RBP4.91□□□□□ -1.62
HMGN1P18-201ENST00000457642 RAPGEF2Q9Y4G8 1499 aa4.9□□□□□ -1.62
HMGN1P18-201ENST00000457642 NEUROD1Q13562 356 aa4.9□□□□□ -1.63
HMGN1P18-201ENST00000457642 GTF3C3Q9Y5Q9 886 aa4.89□□□□□ -1.63
HMGN1P18-201ENST00000457642 KIF27Q86VH2 1401 aa4.89□□□□□ -1.63
HMGN1P18-201ENST00000457642 PRDM2Q13029 1718 aa4.87□□□□□ -1.63
HMGN1P18-201ENST00000457642 NCAPD3P42695 1498 aa4.87□□□□□ -1.63
HMGN1P18-201ENST00000457642 PRXQ9BXM0 1461 aa4.87□□□□□ -1.63
HMGN1P18-201ENST00000457642 ARAP1Q96P48 1450 aa4.86□□□□□ -1.63
HMGN1P18-201ENST00000457642 RANGAP1P46060 587 aaPredicted RBP4.85□□□□□ -1.63
HMGN1P18-201ENST00000457642 YTHDC1Q96MU7 727 aaKnown RBP4.85□□□□□ -1.63
HMGN1P18-201ENST00000457642 CUX1P39880 1505 aa4.84□□□□□ -1.63
HMGN1P18-201ENST00000457642 RRBP1Q9P2E9 1410 aaKnown RBP4.84□□□□□ -1.63
HMGN1P18-201ENST00000457642 CFTRP13569 1480 aa4.83□□□□□ -1.64
HMGN1P18-201ENST00000457642 DHX57Q6P158 1386 aaKnown RBP4.83□□□□□ -1.64
HMGN1P18-201ENST00000457642 MAP3K1Q13233 1512 aa4.82□□□□□ -1.64
HMGN1P18-201ENST00000457642 CUX2O14529 1486 aa4.82□□□□□ -1.64
HMGN1P18-201ENST00000457642 CCNB3Q8WWL7 1395 aa4.82□□□□□ -1.64
HMGN1P18-201ENST00000457642 MIER1Q8N108 512 aa4.82□□□□□ -1.64
HMGN1P18-201ENST00000457642 FHAD1B1AJZ9 1412 aa4.81□□□□□ -1.64
HMGN1P18-201ENST00000457642 TIAM1Q13009 1591 aa4.8□□□□□ -1.64
HMGN1P18-201ENST00000457642 ARHGAP35Q9NRY4 1499 aa4.8□□□□□ -1.64
HMGN1P18-201ENST00000457642 CFAP43Q8NDM7 1665 aa4.79□□□□□ -1.64
HMGN1P18-201ENST00000457642 EFCAB5A4FU69 1503 aa4.78□□□□□ -1.64
HMGN1P18-201ENST00000457642 CARMIL1Q5VZK9 1371 aa4.78□□□□□ -1.64
HMGN1P18-201ENST00000457642 CADPSQ9ULU8 1353 aa4.78□□□□□ -1.64
HMGN1P18-201ENST00000457642 FGD5Q6ZNL6 1462 aa4.77□□□□□ -1.65
HMGN1P18-201ENST00000457642 KANK4Q5T7N3 995 aaPredicted RBP4.77□□□□□ -1.65
HMGN1P18-201ENST00000457642 SETD5Q9C0A6 1442 aa4.77□□□□□ -1.65
HMGN1P18-201ENST00000457642 CUL7Q14999 1698 aa4.77□□□□□ -1.65
HMGN1P18-201ENST00000457642 LRRC9Q6ZRR7 1453 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms