RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
HCG18-239ENST00000454129 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
HCG18-239ENST00000454129 LINC01554Q52M75 96 aa4.08□□□□□ -1.76
HCG18-239ENST00000454129 SPRR1AP35321 89 aa4.07□□□□□ -1.76
HCG18-239ENST00000454129 CRIPTQ9P021 101 aa4.07□□□□□ -1.76
HCG18-239ENST00000454129 H3BS24 57 aa4.07□□□□□ -1.76
HCG18-239ENST00000454129 CMYA5Q8N3K9 4069 aa4.06□□□□□ -1.76
HCG18-239ENST00000454129 A0A0D9SG42 100 aa4.06□□□□□ -1.76
HCG18-239ENST00000454129 KRTAP1-5Q9BYS1 174 aa4.06□□□□□ -1.76
HCG18-239ENST00000454129 PLAC8Q9NZF1 115 aa4.06□□□□□ -1.76
HCG18-239ENST00000454129 IGLV7-46A0A075B6I9 117 aa4.06□□□□□ -1.76
HCG18-239ENST00000454129 Q75L30 129 aa4.06□□□□□ -1.76
HCG18-239ENST00000454129 Q6ZSA8 131 aa4.04□□□□□ -1.76
HCG18-239ENST00000454129 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
HCG18-239ENST00000454129 HRES1P13985 223 aa4.04□□□□□ -1.76
HCG18-239ENST00000454129 Q5VV11 94 aa4.03□□□□□ -1.76
HCG18-239ENST00000454129 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
HCG18-239ENST00000454129 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.77
HCG18-239ENST00000454129 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
HCG18-239ENST00000454129 SPRR1BP22528 89 aa4.02□□□□□ -1.77
HCG18-239ENST00000454129 TENM3Q9P273 2699 aa4.01□□□□□ -1.77
HCG18-239ENST00000454129 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
HCG18-239ENST00000454129 ZCCHC13Q8WW36 166 aaKnown RBP3.98□□□□□ -1.77
HCG18-239ENST00000454129 A0A1B0GU33 70 aa3.98□□□□□ -1.77
HCG18-239ENST00000454129 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
HCG18-239ENST00000454129 KRTAP10-1P60331 282 aa3.97□□□□□ -1.77
HCG18-239ENST00000454129 KRTAP10-2P60368 255 aa3.97□□□□□ -1.77
HCG18-239ENST00000454129 COL7A1Q02388 2944 aa3.96□□□□□ -1.78
HCG18-239ENST00000454129 SPINK7P58062 85 aa3.95□□□□□ -1.78
HCG18-239ENST00000454129 Q5W150 140 aa3.95□□□□□ -1.78
HCG18-239ENST00000454129 PANO1I0J062 215 aa3.95□□□□□ -1.78
HCG18-239ENST00000454129 DNAH7Q8WXX0 4024 aa3.95□□□□□ -1.78
HCG18-239ENST00000454129 M0R2T5 61 aa3.94□□□□□ -1.78
HCG18-239ENST00000454129 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
HCG18-239ENST00000454129 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
HCG18-239ENST00000454129 LCE6AA0A183 80 aa3.93□□□□□ -1.78
HCG18-239ENST00000454129 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
HCG18-239ENST00000454129 DNAH1Q9P2D7 4330 aa3.93□□□□□ -1.78
HCG18-239ENST00000454129 KRTAP4-16G5E9R7 235 aaPredicted RBP3.92□□□□□ -1.78
HCG18-239ENST00000454129 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
HCG18-239ENST00000454129 Q5VSD8 79 aa3.92□□□□□ -1.78
HCG18-239ENST00000454129 A6NN06 94 aa3.91□□□□□ -1.78
HCG18-239ENST00000454129 A8MU10 97 aa3.9□□□□□ -1.78
HCG18-239ENST00000454129 Q6ZR54 194 aa3.9□□□□□ -1.78
HCG18-239ENST00000454129 LINC00483Q53H64 154 aa3.89□□□□□ -1.79
HCG18-239ENST00000454129 S4R3F8 94 aa3.89□□□□□ -1.79
HCG18-239ENST00000454129 A0A087X002 238 aa3.88□□□□□ -1.79
HCG18-239ENST00000454129 DMAC1Q96GE9 116 aa3.88□□□□□ -1.79
HCG18-239ENST00000454129 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
HCG18-239ENST00000454129 R4GN34 69 aa3.86□□□□□ -1.79
HCG18-239ENST00000454129 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
HCG18-239ENST00000454129 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
HCG18-239ENST00000454129 DNHD1Q96M86 4753 aa3.85□□□□□ -1.79
HCG18-239ENST00000454129 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
HCG18-239ENST00000454129 DNAH3Q8TD57 4116 aa3.85□□□□□ -1.79
HCG18-239ENST00000454129 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
HCG18-239ENST00000454129 KRTAP11-1Q8IUC1 163 aa3.85□□□□□ -1.79
HCG18-239ENST00000454129 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.8
HCG18-239ENST00000454129 Q6ZRN7 208 aaPredicted RBP3.83□□□□□ -1.8
HCG18-239ENST00000454129 MEGF8Q7Z7M0 2845 aa3.82□□□□□ -1.8
HCG18-239ENST00000454129 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
HCG18-239ENST00000454129 RPL37P61927 97 aaKnown RBP3.8□□□□□ -1.8
HCG18-239ENST00000454129 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
HCG18-239ENST00000454129 M0QZ58 72 aa3.78□□□□□ -1.8
HCG18-239ENST00000454129 DNAH10Q8IVF4 4471 aa3.77□□□□□ -1.81
HCG18-239ENST00000454129 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
HCG18-239ENST00000454129 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
HCG18-239ENST00000454129 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
HCG18-239ENST00000454129 KRTAP13-1Q8IUC0 172 aa3.74□□□□□ -1.81
HCG18-239ENST00000454129 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
HCG18-239ENST00000454129 FRAS1Q86XX4 4008 aa3.73□□□□□ -1.81
HCG18-239ENST00000454129 ROMO1P60602 79 aa3.73□□□□□ -1.81
HCG18-239ENST00000454129 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
HCG18-239ENST00000454129 RPS29P62273 56 aaKnown RBP3.71□□□□□ -1.81
HCG18-239ENST00000454129 DYNC2H1Q8NCM8 4307 aaKnown RBP3.68□□□□□ -1.82
HCG18-239ENST00000454129 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
HCG18-239ENST00000454129 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
HCG18-239ENST00000454129 KRTAP16-1A8MUX0 517 aa3.67□□□□□ -1.82
HCG18-239ENST00000454129 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
HCG18-239ENST00000454129 FAT2Q9NYQ8 4349 aa3.65□□□□□ -1.82
HCG18-239ENST00000454129 KRTAP21-3Q3LHN1 58 aa3.65□□□□□ -1.83
HCG18-239ENST00000454129 A8MUU9 505 aa3.64□□□□□ -1.83
HCG18-239ENST00000454129 PRKDCP78527 4128 aaKnown RBP3.62□□□□□ -1.83
HCG18-239ENST00000454129 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
HCG18-239ENST00000454129 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
HCG18-239ENST00000454129 HECTD4Q9Y4D8 3996 aa3.61□□□□□ -1.83
HCG18-239ENST00000454129 HUWE1Q7Z6Z7 4374 aaKnown RBP3.61□□□□□ -1.83
HCG18-239ENST00000454129 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
HCG18-239ENST00000454129 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
HCG18-239ENST00000454129 DNAH6Q9C0G6 4158 aa3.57□□□□□ -1.84
HCG18-239ENST00000454129 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
HCG18-239ENST00000454129 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
HCG18-239ENST00000454129 DNAH8Q96JB1 4490 aa3.53□□□□□ -1.84
HCG18-239ENST00000454129 XP32Q5T750 250 aa3.52□□□□□ -1.85
HCG18-239ENST00000454129 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
HCG18-239ENST00000454129 PLECQ15149 4684 aaKnown RBP3.5□□□□□ -1.85
HCG18-239ENST00000454129 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
HCG18-239ENST00000454129 TNP1P09430 55 aa3.49□□□□□ -1.85
HCG18-239ENST00000454129 STARD9Q9P2P6 4700 aa3.47□□□□□ -1.85
HCG18-239ENST00000454129 DNAH17Q9UFH2 4485 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms