RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
HCG18-239ENST00000454129 NISCHQ9Y2I1 1504 aa11.29□□□□□ -0.6
HCG18-239ENST00000454129 SUPT5HO00267 1087 aaKnown RBP11.01□□□□□ -0.65
HCG18-239ENST00000454129 SHROOM4Q9ULL8 1493 aa10.79□□□□□ -0.68
HCG18-239ENST00000454129 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
HCG18-239ENST00000454129 FAM9AQ8IZU1 332 aaPredicted RBP10.4□□□□□ -0.74
HCG18-239ENST00000454129 APLP2Q06481 763 aa10.38□□□□□ -0.75
HCG18-239ENST00000454129 TTBK1Q5TCY1 1321 aaPredicted RBP10.28□□□□□ -0.76
HCG18-239ENST00000454129 PCGF6Q9BYE7 350 aa10.24□□□□□ -0.77
HCG18-239ENST00000454129 PELP1Q8IZL8 1130 aaKnown RBP10.21□□□□□ -0.78
HCG18-239ENST00000454129 RANGAP1P46060 587 aaPredicted RBP10.19□□□□□ -0.78
HCG18-239ENST00000454129 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
HCG18-239ENST00000454129 MYT1Q01538 1121 aa10.1□□□□□ -0.79
HCG18-239ENST00000454129 ATP1B4Q9UN42 357 aaPredicted RBP10.08□□□□□ -0.8
HCG18-239ENST00000454129 UBTFP17480 764 aaKnown RBP10.06□□□□□ -0.8
HCG18-239ENST00000454129 CCER1Q8TC90 406 aaPredicted RBP10.04□□□□□ -0.8
HCG18-239ENST00000454129 HRCP23327 699 aa10.02□□□□□ -0.81
HCG18-239ENST00000454129 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
HCG18-239ENST00000454129 ABCC9O60706 1549 aa9.96□□□□□ -0.81
HCG18-239ENST00000454129 CENPBP07199 599 aaPredicted RBP9.93□□□□□ -0.82
HCG18-239ENST00000454129 PPARGC1BQ86YN6 1023 aaKnown RBP9.92□□□□□ -0.82
HCG18-239ENST00000454129 MYO15BQ96JP2 1530 aa9.85□□□□□ -0.83
HCG18-239ENST00000454129 LOC105371045A0A1W2PR82 267 aa9.79□□□□□ -0.84
HCG18-239ENST00000454129 YTHDC1Q96MU7 727 aaKnown RBP9.79□□□□□ -0.84
HCG18-239ENST00000454129 TRIM26Q12899 539 aaPredicted RBP9.77□□□□□ -0.84
HCG18-239ENST00000454129 ERICH6Q7L0X2 663 aa9.76□□□□□ -0.85
HCG18-239ENST00000454129 CHIC1Q5VXU3 224 aa9.76□□□□□ -0.85
HCG18-239ENST00000454129 ITGAEP38570 1179 aa9.75□□□□□ -0.85
HCG18-239ENST00000454129 NEFLP07196 543 aa9.73□□□□□ -0.85
HCG18-239ENST00000454129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
HCG18-239ENST00000454129 HNRNPUL2Q1KMD3 747 aaKnown RBP9.72□□□□□ -0.85
HCG18-239ENST00000454129 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
HCG18-239ENST00000454129 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
HCG18-239ENST00000454129 CCDC180Q9P1Z9 1646 aa9.66□□□□□ -0.86
HCG18-239ENST00000454129 POLR3GLQ9BT43 218 aa9.63□□□□□ -0.87
HCG18-239ENST00000454129 SCAF1Q9H7N4 1312 aaKnown RBP9.6□□□□□ -0.87
HCG18-239ENST00000454129 CNGB1Q14028 1251 aaPredicted RBP9.57□□□□□ -0.88
HCG18-239ENST00000454129 DCAF1Q9Y4B6 1507 aa9.55□□□□□ -0.88
HCG18-239ENST00000454129 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
HCG18-239ENST00000454129 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
HCG18-239ENST00000454129 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
HCG18-239ENST00000454129 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
HCG18-239ENST00000454129 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
HCG18-239ENST00000454129 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
HCG18-239ENST00000454129 NEUROD1Q13562 356 aa9.4□□□□□ -0.91
HCG18-239ENST00000454129 FBLN2P98095 1184 aa9.36□□□□□ -0.91
HCG18-239ENST00000454129 SCRIBQ14160 1630 aa9.32□□□□□ -0.92
HCG18-239ENST00000454129 ZNF326Q5BKZ1 582 aaKnown RBP9.32□□□□□ -0.92
HCG18-239ENST00000454129 P3H3Q8IVL6 736 aa9.31□□□□□ -0.92
HCG18-239ENST00000454129 CSRNP3Q8WYN3 585 aa9.31□□□□□ -0.92
HCG18-239ENST00000454129 CLSPNQ9HAW4 1339 aa9.29□□□□□ -0.92
HCG18-239ENST00000454129 ARID3CA6NKF2 412 aa9.28□□□□□ -0.92
HCG18-239ENST00000454129 ANP32CO43423 234 aa9.25□□□□□ -0.93
HCG18-239ENST00000454129 ACIN1Q9UKV3 1341 aaKnown RBP9.24□□□□□ -0.93
HCG18-239ENST00000454129 BCANQ96GW7 911 aa9.22□□□□□ -0.93
HCG18-239ENST00000454129 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
HCG18-239ENST00000454129 GTF3C3Q9Y5Q9 886 aa9.2□□□□□ -0.94
HCG18-239ENST00000454129 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
HCG18-239ENST00000454129 RTL5Q5HYW3 569 aaPredicted RBP9.17□□□□□ -0.94
HCG18-239ENST00000454129 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
HCG18-239ENST00000454129 CDK11AQ9UQ88 783 aaPredicted RBP9.15□□□□□ -0.94
HCG18-239ENST00000454129 NACADO15069 1562 aa9.1□□□□□ -0.95
HCG18-239ENST00000454129 BCL11AQ9H165 835 aa9.1□□□□□ -0.95
HCG18-239ENST00000454129 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
HCG18-239ENST00000454129 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
HCG18-239ENST00000454129 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
HCG18-239ENST00000454129 NEFMP07197 916 aa9.07□□□□□ -0.96
HCG18-239ENST00000454129 CHGAP10645 457 aaKnown RBP9.05□□□□□ -0.96
HCG18-239ENST00000454129 TONSLQ96HA7 1378 aa9.05□□□□□ -0.96
HCG18-239ENST00000454129 CHIC2Q9UKJ5 165 aa9.04□□□□□ -0.96
HCG18-239ENST00000454129 CECR2Q9BXF3 1484 aa9.04□□□□□ -0.96
HCG18-239ENST00000454129 DDX10Q13206 875 aaKnown RBP9.03□□□□□ -0.96
HCG18-239ENST00000454129 ESF1Q9H501 851 aaKnown RBP9.03□□□□□ -0.96
HCG18-239ENST00000454129 NPM1P06748 294 aaKnown RBP eCLIP9.02□□□□□ -0.97
HCG18-239ENST00000454129 STAG3Q9UJ98 1225 aa9□□□□□ -0.97
HCG18-239ENST00000454129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9□□□□□ -0.972e-6■■□□□ 11.6
HCG18-239ENST00000454129 HNRNPUQ00839 825 aaKnown RBP eCLIP8.99□□□□□ -0.97
HCG18-239ENST00000454129 FAM9BQ8IZU0 186 aa8.98□□□□□ -0.97
HCG18-239ENST00000454129 PLPPR3Q6T4P5 718 aa8.98□□□□□ -0.97
HCG18-239ENST00000454129 TSPY4P0CV99 314 aa8.98□□□□□ -0.97
HCG18-239ENST00000454129 TSPY10P0CW01 314 aa8.98□□□□□ -0.97
HCG18-239ENST00000454129 SALL2Q9Y467 1007 aaPredicted RBP8.98□□□□□ -0.97
HCG18-239ENST00000454129 FKBP8Q14318 412 aa8.97□□□□□ -0.97
HCG18-239ENST00000454129 CHMP7Q8WUX9 453 aaPredicted RBP8.95□□□□□ -0.98
HCG18-239ENST00000454129 KDM2AQ9Y2K7 1162 aa8.95□□□□□ -0.98
HCG18-239ENST00000454129 MTUS2Q5JR59 1369 aa8.95□□□□□ -0.98
HCG18-239ENST00000454129 DNAJC5BQ9UF47 199 aa8.95□□□□□ -0.98
HCG18-239ENST00000454129 NPM2Q86SE8 214 aaKnown RBP8.94□□□□□ -0.98
HCG18-239ENST00000454129 ANP32AP39687 249 aaKnown RBP8.94□□□□□ -0.98
HCG18-239ENST00000454129 TMC1Q8TDI8 760 aa8.94□□□□□ -0.98
HCG18-239ENST00000454129 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
HCG18-239ENST00000454129 CLIP1P30622 1438 aa8.91□□□□□ -0.98
HCG18-239ENST00000454129 RRP7BPQ9NSQ0 103 aa8.9□□□□□ -0.98
HCG18-239ENST00000454129 MRS2Q9HD23 443 aa8.89□□□□□ -0.99
HCG18-239ENST00000454129 RSF1Q96T23 1441 aaPredicted RBP8.89□□□□□ -0.99
HCG18-239ENST00000454129 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
HCG18-239ENST00000454129 MIER1Q8N108 512 aa8.87□□□□□ -0.99
HCG18-239ENST00000454129 CCDC136Q96JN2 1154 aa8.86□□□□□ -0.99
HCG18-239ENST00000454129 PLEKHD1A6NEE1 506 aa8.85□□□□□ -0.99
HCG18-239ENST00000454129 EIF4G2P78344 907 aaKnown RBP eCLIP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms