RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 C14orf177Q52M58 125 aa12.14□□□□□ -0.47
SHOX2-203ENST00000441443 MEGF8Q7Z7M0 2845 aa12.13□□□□□ -0.47
SHOX2-203ENST00000441443 ANAPC11Q9NYG5 84 aa12.12□□□□□ -0.47
SHOX2-203ENST00000441443 PRKDCP78527 4128 aaKnown RBP12.12□□□□□ -0.47
SHOX2-203ENST00000441443 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
SHOX2-203ENST00000441443 Q5W150 140 aa12.08□□□□□ -0.47
SHOX2-203ENST00000441443 STARD9Q9P2P6 4700 aa12.07□□□□□ -0.48
SHOX2-203ENST00000441443 SPINK6Q6UWN8 80 aa12.05□□□□□ -0.48
SHOX2-203ENST00000441443 PRAC1Q96KF2 57 aa12.05□□□□□ -0.48
SHOX2-203ENST00000441443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.03□□□□□ -0.48
SHOX2-203ENST00000441443 LINC00313P59037 77 aa12.03□□□□□ -0.48
SHOX2-203ENST00000441443 WWC2-AS2Q96NR7 200 aa12.02□□□□□ -0.49
SHOX2-203ENST00000441443 Q6ZRN7 208 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-203ENST00000441443 LINC00483Q53H64 154 aa12□□□□□ -0.49
SHOX2-203ENST00000441443 ADM2Q7Z4H4 148 aa11.99□□□□□ -0.49
SHOX2-203ENST00000441443 DNHD1Q96M86 4753 aa11.98□□□□□ -0.49
SHOX2-203ENST00000441443 KMT2AQ03164 3969 aa11.96□□□□□ -0.49
SHOX2-203ENST00000441443 ACYP2P14621 99 aa11.96□□□□□ -0.5
SHOX2-203ENST00000441443 FRAS1Q86XX4 4008 aa11.95□□□□□ -0.5
SHOX2-203ENST00000441443 KRTAP13-3Q3SY46 172 aa11.95□□□□□ -0.5
SHOX2-203ENST00000441443 A0A087WTM6 91 aa11.94□□□□□ -0.5
SHOX2-203ENST00000441443 SPACA4Q8TDM5 124 aa11.93□□□□□ -0.5
SHOX2-203ENST00000441443 DYNC2H1Q8NCM8 4307 aaKnown RBP11.92□□□□□ -0.5
SHOX2-203ENST00000441443 PSORS1C2Q9UIG4 136 aa11.91□□□□□ -0.5
SHOX2-203ENST00000441443 ZNF706Q9Y5V0 76 aaPredicted RBP11.9□□□□□ -0.5
SHOX2-203ENST00000441443 RETNLBQ9BQ08 111 aa11.9□□□□□ -0.5
SHOX2-203ENST00000441443 FBN3Q75N90 2809 aa11.9□□□□□ -0.51
SHOX2-203ENST00000441443 RTL8CO15255 209 aa11.89□□□□□ -0.51
SHOX2-203ENST00000441443 ALMS1Q8TCU4 4167 aa11.89□□□□□ -0.51
SHOX2-203ENST00000441443 C8orf87E5RJ46 101 aa11.89□□□□□ -0.51
SHOX2-203ENST00000441443 LY6G6CO95867 125 aa11.87□□□□□ -0.51
SHOX2-203ENST00000441443 DNAH8Q96JB1 4490 aa11.87□□□□□ -0.51
SHOX2-203ENST00000441443 A0A1B0GU69 56 aa11.86□□□□□ -0.51
SHOX2-203ENST00000441443 VPS13DQ5THJ4 4388 aa11.84□□□□□ -0.51
SHOX2-203ENST00000441443 CIRBP-AS1Q8TBR5 109 aa11.84□□□□□ -0.51
SHOX2-203ENST00000441443 DMAC1Q96GE9 116 aa11.84□□□□□ -0.51
SHOX2-203ENST00000441443 IGLV5-52A0A0A0MRZ9 124 aa11.83□□□□□ -0.52
SHOX2-203ENST00000441443 ZNF861PO60384 105 aa11.81□□□□□ -0.52
SHOX2-203ENST00000441443 PLA2G1BP04054 148 aaKnown RBP11.79□□□□□ -0.52
SHOX2-203ENST00000441443 DNAH2Q9P225 4427 aa11.78□□□□□ -0.52
SHOX2-203ENST00000441443 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
SHOX2-203ENST00000441443 HECTD4Q9Y4D8 3996 aa11.78□□□□□ -0.52
SHOX2-203ENST00000441443 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
SHOX2-203ENST00000441443 MIR22HGQ0VDD5 57 aa11.73□□□□□ -0.53
SHOX2-203ENST00000441443 LINC01554Q52M75 96 aa11.71□□□□□ -0.54
SHOX2-203ENST00000441443 UQCR11O14957 56 aa11.68□□□□□ -0.54
SHOX2-203ENST00000441443 FAM229AH3BQW9 127 aa11.68□□□□□ -0.54
SHOX2-203ENST00000441443 IGKV2-30P06310 120 aa11.66□□□□□ -0.54
SHOX2-203ENST00000441443 DNAH6Q9C0G6 4158 aa11.63□□□□□ -0.55
SHOX2-203ENST00000441443 DNAH17Q9UFH2 4485 aa11.63□□□□□ -0.55
SHOX2-203ENST00000441443 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
SHOX2-203ENST00000441443 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
SHOX2-203ENST00000441443 IGKV2D-30A0A075B6S6 120 aa11.6□□□□□ -0.55
SHOX2-203ENST00000441443 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
SHOX2-203ENST00000441443 CSAG1Q6PB30 78 aa11.58□□□□□ -0.56
SHOX2-203ENST00000441443 DNAH11Q96DT5 4516 aa11.57□□□□□ -0.56
SHOX2-203ENST00000441443 SSBP3-AS1Q7Z2R9 100 aa11.54□□□□□ -0.56
SHOX2-203ENST00000441443 SPINK1P00995 79 aa11.51□□□□□ -0.57
SHOX2-203ENST00000441443 KRTAP16-1A8MUX0 517 aa11.48□□□□□ -0.57
SHOX2-203ENST00000441443 HYDINQ4G0P3 5121 aa11.45□□□□□ -0.58
SHOX2-203ENST00000441443 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
SHOX2-203ENST00000441443 DNAH5Q8TE73 4624 aa11.43□□□□□ -0.58
SHOX2-203ENST00000441443 KRTAP13-2Q52LG2 175 aa11.42□□□□□ -0.58
SHOX2-203ENST00000441443 H3BS24 57 aa11.4□□□□□ -0.58
SHOX2-203ENST00000441443 Q8N1X5 172 aa11.38□□□□□ -0.59
SHOX2-203ENST00000441443 LRP1BQ9NZR2 4599 aa11.38□□□□□ -0.59
SHOX2-203ENST00000441443 Q6ZSA8 131 aa11.25□□□□□ -0.61
SHOX2-203ENST00000441443 H0YAA0 97 aa11.24□□□□□ -0.61
SHOX2-203ENST00000441443 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
SHOX2-203ENST00000441443 VPS13BQ7Z7G8 4022 aa11.23□□□□□ -0.61
SHOX2-203ENST00000441443 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
SHOX2-203ENST00000441443 PKD1P98161 4303 aa11.22□□□□□ -0.61
SHOX2-203ENST00000441443 TYMSOSQ8TAI1 123 aa11.19□□□□□ -0.62
SHOX2-203ENST00000441443 A8MUU9 505 aa11.19□□□□□ -0.62
SHOX2-203ENST00000441443 SMR3BP02814 79 aaPredicted RBP11.18□□□□□ -0.62
SHOX2-203ENST00000441443 LINC00304Q8N9R0 145 aa11.15□□□□□ -0.62
SHOX2-203ENST00000441443 KRTAP1-4P0C5Y4 121 aa11.15□□□□□ -0.62
SHOX2-203ENST00000441443 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
SHOX2-203ENST00000441443 KRTAP25-1Q3LHN0 102 aa11.11□□□□□ -0.63
SHOX2-203ENST00000441443 A0A1B0GU33 70 aa11.08□□□□□ -0.64
SHOX2-203ENST00000441443 CRIPTQ9P021 101 aa11.06□□□□□ -0.64
SHOX2-203ENST00000441443 SACSQ9NZJ4 4579 aa11.03□□□□□ -0.64
SHOX2-203ENST00000441443 FAT1Q14517 4588 aa11□□□□□ -0.65
SHOX2-203ENST00000441443 H1FX-AS1Q4G0G2 97 aa10.99□□□□□ -0.65
SHOX2-203ENST00000441443 ROMO1P60602 79 aa10.99□□□□□ -0.65
SHOX2-203ENST00000441443 KRTAP3-1Q9BYR8 98 aa10.98□□□□□ -0.65
SHOX2-203ENST00000441443 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
SHOX2-203ENST00000441443 DYNC1H1Q14204 4646 aaKnown RBP10.94□□□□□ -0.66
SHOX2-203ENST00000441443 KRTAP21-3Q3LHN1 58 aa10.89□□□□□ -0.67
SHOX2-203ENST00000441443 KMT2CQ8NEZ4 4911 aaKnown RBP10.81□□□□□ -0.68
SHOX2-203ENST00000441443 COX6B2Q6YFQ2 88 aa10.81□□□□□ -0.68
SHOX2-203ENST00000441443 K7ERS5 55 aa10.81□□□□□ -0.68
SHOX2-203ENST00000441443 DMBT1Q9UGM3 2413 aaPredicted RBP10.78□□□□□ -0.68
SHOX2-203ENST00000441443 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
SHOX2-203ENST00000441443 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
SHOX2-203ENST00000441443 P0C880 135 aa10.74□□□□□ -0.69
SHOX2-203ENST00000441443 APOBP04114 4563 aaKnown RBP10.71□□□□□ -0.69
SHOX2-203ENST00000441443 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
SHOX2-203ENST00000441443 RYR2Q92736 4967 aa10.68□□□□□ -0.7
SHOX2-203ENST00000441443 KRTAP10-4P60372 401 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms