RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
TSC1-203ENST00000440111 KRTAP13-3Q3SY46 172 aa4.07□□□□□ -1.76
TSC1-203ENST00000440111 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
TSC1-203ENST00000440111 DSPP15924 2871 aaKnown RBP4.06□□□□□ -1.76
TSC1-203ENST00000440111 NBEAL2Q6ZNJ1 2754 aa4.05□□□□□ -1.76
TSC1-203ENST00000440111 KALRNO60229 2985 aa4.05□□□□□ -1.76
TSC1-203ENST00000440111 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
TSC1-203ENST00000440111 MGAQ8IWI9 3026 aa4.03□□□□□ -1.76
TSC1-203ENST00000440111 KRTAP1-4P0C5Y4 121 aa4.03□□□□□ -1.76
TSC1-203ENST00000440111 NF1P21359 2839 aa4.02□□□□□ -1.77
TSC1-203ENST00000440111 SPTBN5Q9NRC6 3674 aaKnown RBP4.01□□□□□ -1.77
TSC1-203ENST00000440111 USP34Q70CQ2 3546 aa4.01□□□□□ -1.77
TSC1-203ENST00000440111 WDFY4Q6ZS81 3184 aa4□□□□□ -1.77
TSC1-203ENST00000440111 HIVEP1P15822 2718 aa4□□□□□ -1.77
TSC1-203ENST00000440111 TNRC18O15417 2968 aaPredicted RBP3.98□□□□□ -1.77
TSC1-203ENST00000440111 PDZD2O15018 2839 aa3.98□□□□□ -1.77
TSC1-203ENST00000440111 DNAH14Q0VDD8 3507 aa3.97□□□□□ -1.77
TSC1-203ENST00000440111 H0YAA0 97 aa3.94□□□□□ -1.78
TSC1-203ENST00000440111 INE1O15225 51 aa3.92□□□□□ -1.78
TSC1-203ENST00000440111 SPEGQ15772 3267 aa3.92□□□□□ -1.78
TSC1-203ENST00000440111 XP32Q5T750 250 aa3.91□□□□□ -1.78
TSC1-203ENST00000440111 CELSR3Q9NYQ7 3312 aa3.9□□□□□ -1.78
TSC1-203ENST00000440111 MYO15AQ9UKN7 3530 aa3.9□□□□□ -1.78
TSC1-203ENST00000440111 A0A1B0GVY2 172 aa3.89□□□□□ -1.79
TSC1-203ENST00000440111 TGP01266 2768 aa3.89□□□□□ -1.79
TSC1-203ENST00000440111 CFAP54Q96N23 3096 aa3.87□□□□□ -1.79
TSC1-203ENST00000440111 VPS13AQ96RL7 3174 aa3.86□□□□□ -1.79
TSC1-203ENST00000440111 LRBAP50851 2863 aa3.85□□□□□ -1.79
TSC1-203ENST00000440111 ZANQ9Y493 2812 aa3.85□□□□□ -1.79
TSC1-203ENST00000440111 FRYQ5TBA9 3013 aa3.85□□□□□ -1.79
TSC1-203ENST00000440111 REV3LO60673 3130 aa3.85□□□□□ -1.79
TSC1-203ENST00000440111 MXRA5Q9NR99 2828 aa3.84□□□□□ -1.79
TSC1-203ENST00000440111 TENM2Q9NT68 2774 aa3.84□□□□□ -1.79
TSC1-203ENST00000440111 CRYBG3Q68DQ2 2970 aa3.84□□□□□ -1.8
TSC1-203ENST00000440111 KRTAP13-4Q3LI77 160 aa3.83□□□□□ -1.8
TSC1-203ENST00000440111 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
TSC1-203ENST00000440111 FRYLO94915 3013 aa3.83□□□□□ -1.8
TSC1-203ENST00000440111 ATMQ13315 3056 aa3.81□□□□□ -1.8
TSC1-203ENST00000440111 CELSR2Q9HCU4 2923 aa3.8□□□□□ -1.8
TSC1-203ENST00000440111 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
TSC1-203ENST00000440111 FBN2P35556 2912 aa3.8□□□□□ -1.8
TSC1-203ENST00000440111 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
TSC1-203ENST00000440111 TENM4Q6N022 2769 aa3.79□□□□□ -1.8
TSC1-203ENST00000440111 MUC3AQ02505 3323 aa3.79□□□□□ -1.8
TSC1-203ENST00000440111 NBEAQ8NFP9 2946 aa3.78□□□□□ -1.8
TSC1-203ENST00000440111 LAMA1P25391 3075 aa3.78□□□□□ -1.8
TSC1-203ENST00000440111 FREM2Q5SZK8 3169 aa3.75□□□□□ -1.81
TSC1-203ENST00000440111 DMDP11532 3685 aa3.74□□□□□ -1.81
TSC1-203ENST00000440111 ASPMQ8IZT6 3477 aa3.72□□□□□ -1.81
TSC1-203ENST00000440111 SRRM2Q9UQ35 2752 aaKnown RBP3.72□□□□□ -1.81
TSC1-203ENST00000440111 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.82
TSC1-203ENST00000440111 ADGRG4Q8IZF6 3080 aa3.7□□□□□ -1.82
TSC1-203ENST00000440111 ZZEF1O43149 2961 aa3.7□□□□□ -1.82
TSC1-203ENST00000440111 ASH1LQ9NR48 2969 aaKnown RBP3.7□□□□□ -1.82
TSC1-203ENST00000440111 COL12A1Q99715 3063 aa3.68□□□□□ -1.82
TSC1-203ENST00000440111 DMXL1Q9Y485 3027 aa3.68□□□□□ -1.82
TSC1-203ENST00000440111 DMXL2Q8TDJ6 3036 aa3.67□□□□□ -1.82
TSC1-203ENST00000440111 TACC2O95359 2948 aa3.66□□□□□ -1.82
TSC1-203ENST00000440111 CFAP47Q6ZTR5 3102 aa3.66□□□□□ -1.82
TSC1-203ENST00000440111 WDFY3Q8IZQ1 3526 aa3.65□□□□□ -1.82
TSC1-203ENST00000440111 VWFP04275 2813 aa3.63□□□□□ -1.83
TSC1-203ENST00000440111 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
TSC1-203ENST00000440111 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
TSC1-203ENST00000440111 ANK3Q12955 4377 aaKnown RBP3.63□□□□□ -1.83
TSC1-203ENST00000440111 PKD1L1Q8TDX9 2849 aa3.62□□□□□ -1.83
TSC1-203ENST00000440111 BOD1L1Q8NFC6 3051 aa3.62□□□□□ -1.83
TSC1-203ENST00000440111 DCHS1Q96JQ0 3298 aa3.62□□□□□ -1.83
TSC1-203ENST00000440111 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
TSC1-203ENST00000440111 LAMA5O15230 3695 aa3.61□□□□□ -1.83
TSC1-203ENST00000440111 DCHS2Q6V1P9 2916 aa3.59□□□□□ -1.84
TSC1-203ENST00000440111 LOC400499M0QZD8 3231 aa3.58□□□□□ -1.84
TSC1-203ENST00000440111 RELNP78509 3460 aa3.57□□□□□ -1.84
TSC1-203ENST00000440111 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
TSC1-203ENST00000440111 COL7A1Q02388 2944 aa3.55□□□□□ -1.84
TSC1-203ENST00000440111 ZFHX4Q86UP3 3567 aa3.55□□□□□ -1.84
TSC1-203ENST00000440111 HUWE1Q7Z6Z7 4374 aaKnown RBP3.54□□□□□ -1.84
TSC1-203ENST00000440111 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
TSC1-203ENST00000440111 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
TSC1-203ENST00000440111 CRCT1Q9UGL9 99 aa3.52□□□□□ -1.85
TSC1-203ENST00000440111 CELSR1Q9NYQ6 3014 aa3.51□□□□□ -1.85
TSC1-203ENST00000440111 DNAH10Q8IVF4 4471 aa3.51□□□□□ -1.85
TSC1-203ENST00000440111 FBN3Q75N90 2809 aa3.49□□□□□ -1.85
TSC1-203ENST00000440111 KRTAP3-2Q9BYR7 98 aa3.49□□□□□ -1.85
TSC1-203ENST00000440111 MEGF8Q7Z7M0 2845 aa3.48□□□□□ -1.85
TSC1-203ENST00000440111 SMG1Q96Q15 3661 aaKnown RBP3.46□□□□□ -1.86
TSC1-203ENST00000440111 MT1HL1P0DM35 61 aa3.46□□□□□ -1.86
TSC1-203ENST00000440111 KRTAP3-3Q9BYR6 98 aa3.46□□□□□ -1.86
TSC1-203ENST00000440111 NBPF19A0A087WUL8 3843 aa3.45□□□□□ -1.86
TSC1-203ENST00000440111 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
TSC1-203ENST00000440111 DNAH1Q9P2D7 4330 aa3.41□□□□□ -1.86
TSC1-203ENST00000440111 DNAH11Q96DT5 4516 aa3.41□□□□□ -1.86
TSC1-203ENST00000440111 PLECQ15149 4684 aaKnown RBP3.41□□□□□ -1.86
TSC1-203ENST00000440111 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.87
TSC1-203ENST00000440111 DNAH17Q9UFH2 4485 aa3.38□□□□□ -1.87
TSC1-203ENST00000440111 HERC1Q15751 4861 aa3.37□□□□□ -1.87
TSC1-203ENST00000440111 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
TSC1-203ENST00000440111 CSMD2Q7Z408 3487 aa3.36□□□□□ -1.87
TSC1-203ENST00000440111 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
TSC1-203ENST00000440111 FBN1P35555 2871 aaKnown RBP3.34□□□□□ -1.87
TSC1-203ENST00000440111 CSMD1Q96PZ7 3565 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms