RNA–Protein interactions for RNA: ENST00000419022.6

PAX6-209, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 6,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-209ENST00000419022 FREM2Q5SZK8 3169 aa4.79□□□□□ -1.64
PAX6-209ENST00000419022 APCP25054 2843 aa4.78□□□□□ -1.64
PAX6-209ENST00000419022 KALRNO60229 2985 aa4.77□□□□□ -1.65
PAX6-209ENST00000419022 SZT2Q5T011 3432 aa4.77□□□□□ -1.65
PAX6-209ENST00000419022 PRUNE2Q8WUY3 3088 aa4.76□□□□□ -1.65
PAX6-209ENST00000419022 ITPR1Q14643 2758 aa4.76□□□□□ -1.65
PAX6-209ENST00000419022 VPS13AQ96RL7 3174 aa4.75□□□□□ -1.65
PAX6-209ENST00000419022 BRCA2P51587 3418 aa4.75□□□□□ -1.65
PAX6-209ENST00000419022 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
PAX6-209ENST00000419022 COL6A3P12111 3177 aa4.74□□□□□ -1.65
PAX6-209ENST00000419022 UTP20O75691 2785 aaKnown RBP4.7□□□□□ -1.66
PAX6-209ENST00000419022 CDH23Q9H251 3354 aa4.67□□□□□ -1.66
PAX6-209ENST00000419022 CRYBG3Q68DQ2 2970 aa4.66□□□□□ -1.66
PAX6-209ENST00000419022 HIVEP1P15822 2718 aa4.65□□□□□ -1.66
PAX6-209ENST00000419022 ASH1LQ9NR48 2969 aaKnown RBP4.65□□□□□ -1.67
PAX6-209ENST00000419022 KRTAP13-3Q3SY46 172 aa4.65□□□□□ -1.67
PAX6-209ENST00000419022 LRBAP50851 2863 aa4.64□□□□□ -1.67
PAX6-209ENST00000419022 TACC2O95359 2948 aa4.64□□□□□ -1.67
PAX6-209ENST00000419022 ATMQ13315 3056 aa4.63□□□□□ -1.67
PAX6-209ENST00000419022 DMXL2Q8TDJ6 3036 aa4.62□□□□□ -1.67
PAX6-209ENST00000419022 SPEGQ15772 3267 aa4.62□□□□□ -1.67
PAX6-209ENST00000419022 CFAP47Q6ZTR5 3102 aa4.61□□□□□ -1.67
PAX6-209ENST00000419022 NBEAQ8NFP9 2946 aa4.61□□□□□ -1.67
PAX6-209ENST00000419022 NIPBLQ6KC79 2804 aaeCLIP4.6□□□□□ -1.67
PAX6-209ENST00000419022 ADGRG4Q8IZF6 3080 aa4.6□□□□□ -1.67
PAX6-209ENST00000419022 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
PAX6-209ENST00000419022 FLNCQ14315 2725 aa4.59□□□□□ -1.68
PAX6-209ENST00000419022 COL12A1Q99715 3063 aa4.58□□□□□ -1.68
PAX6-209ENST00000419022 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
PAX6-209ENST00000419022 LAMA1P25391 3075 aa4.57□□□□□ -1.68
PAX6-209ENST00000419022 CELSR2Q9HCU4 2923 aa4.53□□□□□ -1.68
PAX6-209ENST00000419022 VCANP13611 3396 aa4.53□□□□□ -1.68
PAX6-209ENST00000419022 USP34Q70CQ2 3546 aa4.52□□□□□ -1.69
PAX6-209ENST00000419022 FRYLO94915 3013 aa4.52□□□□□ -1.69
PAX6-209ENST00000419022 TENM4Q6N022 2769 aa4.51□□□□□ -1.69
PAX6-209ENST00000419022 BOD1L1Q8NFC6 3051 aa4.51□□□□□ -1.69
PAX6-209ENST00000419022 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
PAX6-209ENST00000419022 ZZEF1O43149 2961 aa4.5□□□□□ -1.69
PAX6-209ENST00000419022 ASPMQ8IZT6 3477 aa4.5□□□□□ -1.69
PAX6-209ENST00000419022 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
PAX6-209ENST00000419022 DCHS2Q6V1P9 2916 aa4.48□□□□□ -1.69
PAX6-209ENST00000419022 DCHS1Q96JQ0 3298 aa4.47□□□□□ -1.69
PAX6-209ENST00000419022 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
PAX6-209ENST00000419022 SPTBN5Q9NRC6 3674 aaKnown RBP4.45□□□□□ -1.7
PAX6-209ENST00000419022 TGP01266 2768 aa4.45□□□□□ -1.7
PAX6-209ENST00000419022 EYSQ5T1H1 3165 aa4.43□□□□□ -1.7
PAX6-209ENST00000419022 MYO15AQ9UKN7 3530 aa4.41□□□□□ -1.7
PAX6-209ENST00000419022 HRNRQ86YZ3 2850 aaPredicted RBP4.41□□□□□ -1.7
PAX6-209ENST00000419022 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.7
PAX6-209ENST00000419022 ZANQ9Y493 2812 aa4.4□□□□□ -1.7
PAX6-209ENST00000419022 TNRC18O15417 2968 aaPredicted RBP4.4□□□□□ -1.7
PAX6-209ENST00000419022 NBPF19A0A087WUL8 3843 aa4.39□□□□□ -1.71
PAX6-209ENST00000419022 LOC400499M0QZD8 3231 aa4.37□□□□□ -1.71
PAX6-209ENST00000419022 TENM1Q9UKZ4 2725 aa4.36□□□□□ -1.71
PAX6-209ENST00000419022 WDFY3Q8IZQ1 3526 aa4.34□□□□□ -1.71
PAX6-209ENST00000419022 TENM3Q9P273 2699 aa4.34□□□□□ -1.72
PAX6-209ENST00000419022 FBN2P35556 2912 aa4.34□□□□□ -1.72
PAX6-209ENST00000419022 NF1P21359 2839 aa4.33□□□□□ -1.72
PAX6-209ENST00000419022 CELSR1Q9NYQ6 3014 aa4.31□□□□□ -1.72
PAX6-209ENST00000419022 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
PAX6-209ENST00000419022 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
PAX6-209ENST00000419022 ZFHX4Q86UP3 3567 aa4.3□□□□□ -1.72
PAX6-209ENST00000419022 LAMA5O15230 3695 aa4.26□□□□□ -1.73
PAX6-209ENST00000419022 CSMD1Q96PZ7 3565 aa4.25□□□□□ -1.73
PAX6-209ENST00000419022 DMXL1Q9Y485 3027 aa4.23□□□□□ -1.73
PAX6-209ENST00000419022 INE1O15225 51 aa4.2□□□□□ -1.74
PAX6-209ENST00000419022 PDZD2O15018 2839 aa4.17□□□□□ -1.74
PAX6-209ENST00000419022 MXRA5Q9NR99 2828 aa4.17□□□□□ -1.74
PAX6-209ENST00000419022 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
PAX6-209ENST00000419022 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
PAX6-209ENST00000419022 KRTAP3-3Q9BYR6 98 aa4.12□□□□□ -1.75
PAX6-209ENST00000419022 RELNP78509 3460 aa4.12□□□□□ -1.75
PAX6-209ENST00000419022 PKD1L1Q8TDX9 2849 aa4.1□□□□□ -1.75
PAX6-209ENST00000419022 SPENQ96T58 3664 aaKnown RBP4.09□□□□□ -1.75
PAX6-209ENST00000419022 LORP23490 312 aaPredicted RBP4.08□□□□□ -1.76
PAX6-209ENST00000419022 VWFP04275 2813 aa4.06□□□□□ -1.76
PAX6-209ENST00000419022 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
PAX6-209ENST00000419022 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
PAX6-209ENST00000419022 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
PAX6-209ENST00000419022 SMG1Q96Q15 3661 aaKnown RBP4.03□□□□□ -1.76
PAX6-209ENST00000419022 KRTAP4-5Q9BYR2 181 aa4.02□□□□□ -1.77
PAX6-209ENST00000419022 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
PAX6-209ENST00000419022 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
PAX6-209ENST00000419022 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
PAX6-209ENST00000419022 FBN3Q75N90 2809 aa3.97□□□□□ -1.77
PAX6-209ENST00000419022 MEGF8Q7Z7M0 2845 aa3.97□□□□□ -1.77
PAX6-209ENST00000419022 DMDP11532 3685 aa3.95□□□□□ -1.78
PAX6-209ENST00000419022 ANK3Q12955 4377 aaKnown RBP3.94□□□□□ -1.78
PAX6-209ENST00000419022 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
PAX6-209ENST00000419022 SVEP1Q4LDE5 3571 aa3.89□□□□□ -1.79
PAX6-209ENST00000419022 FBN1P35555 2871 aaKnown RBP3.89□□□□□ -1.79
PAX6-209ENST00000419022 MUC3AQ02505 3323 aa3.87□□□□□ -1.79
PAX6-209ENST00000419022 OTOGQ6ZRI0 2925 aa3.87□□□□□ -1.79
PAX6-209ENST00000419022 ZFHX3Q15911 3703 aa3.85□□□□□ -1.79
PAX6-209ENST00000419022 HUWE1Q7Z6Z7 4374 aaKnown RBP3.84□□□□□ -1.8
PAX6-209ENST00000419022 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
PAX6-209ENST00000419022 ALMS1Q8TCU4 4167 aa3.82□□□□□ -1.8
PAX6-209ENST00000419022 SRRM2Q9UQ35 2752 aaKnown RBP3.82□□□□□ -1.8
PAX6-209ENST00000419022 CUBNO60494 3623 aa3.81□□□□□ -1.8
PAX6-209ENST00000419022 AKAP9Q99996 3911 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms