RNA–Protein interactions for RNA: ENST00000419022.6

PAX6-209, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 6,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-209ENST00000419022 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
PAX6-209ENST00000419022 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
PAX6-209ENST00000419022 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
PAX6-209ENST00000419022 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
PAX6-209ENST00000419022 NISCHQ9Y2I1 1504 aa14.5□□□□□ -0.09
PAX6-209ENST00000419022 SHROOM4Q9ULL8 1493 aa14.4□□□□□ -0.1
PAX6-209ENST00000419022 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
PAX6-209ENST00000419022 TTBK1Q5TCY1 1321 aaPredicted RBP14.32□□□□□ -0.12
PAX6-209ENST00000419022 APLP2Q06481 763 aa14.21□□□□□ -0.13
PAX6-209ENST00000419022 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
PAX6-209ENST00000419022 RANGAP1P46060 587 aaPredicted RBP14.1□□□□□ -0.15
PAX6-209ENST00000419022 PCGF6Q9BYE7 350 aa14.05□□□□□ -0.16
PAX6-209ENST00000419022 CENPBP07199 599 aaPredicted RBP14.03□□□□□ -0.16
PAX6-209ENST00000419022 ZEB1P37275 1124 aaPredicted RBP14□□□□□ -0.17
PAX6-209ENST00000419022 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
PAX6-209ENST00000419022 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
PAX6-209ENST00000419022 MYT1Q01538 1121 aa13.94□□□□□ -0.18
PAX6-209ENST00000419022 MYT1LQ9UL68 1186 aa13.74□□□□□ -0.21
PAX6-209ENST00000419022 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
PAX6-209ENST00000419022 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
PAX6-209ENST00000419022 NEFLP07196 543 aa13.69□□□□□ -0.22
PAX6-209ENST00000419022 CHIC1Q5VXU3 224 aa13.68□□□□□ -0.22
PAX6-209ENST00000419022 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
PAX6-209ENST00000419022 POLR3GLQ9BT43 218 aa13.57□□□□□ -0.24
PAX6-209ENST00000419022 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
PAX6-209ENST00000419022 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
PAX6-209ENST00000419022 DAXXQ9UER7 740 aaPredicted RBP13.47□□□□□ -0.25
PAX6-209ENST00000419022 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
PAX6-209ENST00000419022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
PAX6-209ENST00000419022 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
PAX6-209ENST00000419022 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
PAX6-209ENST00000419022 HRCP23327 699 aa13.41□□□□□ -0.26
PAX6-209ENST00000419022 ITGAEP38570 1179 aa13.29□□□□□ -0.28
PAX6-209ENST00000419022 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
PAX6-209ENST00000419022 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
PAX6-209ENST00000419022 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
PAX6-209ENST00000419022 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
PAX6-209ENST00000419022 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
PAX6-209ENST00000419022 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
PAX6-209ENST00000419022 DIEXFQ68CQ4 756 aaKnown RBP13.07□□□□□ -0.32
PAX6-209ENST00000419022 BCANQ96GW7 911 aa12.98□□□□□ -0.33
PAX6-209ENST00000419022 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
PAX6-209ENST00000419022 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
PAX6-209ENST00000419022 FBLN2P98095 1184 aa12.86□□□□□ -0.35
PAX6-209ENST00000419022 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
PAX6-209ENST00000419022 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
PAX6-209ENST00000419022 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
PAX6-209ENST00000419022 ANP32CO43423 234 aa12.79□□□□□ -0.36
PAX6-209ENST00000419022 ZNF326Q5BKZ1 582 aaKnown RBP12.78□□□□□ -0.36
PAX6-209ENST00000419022 TRIM52Q96A61 297 aa12.77□□□□□ -0.37
PAX6-209ENST00000419022 NEUROD1Q13562 356 aa12.76□□□□□ -0.37
PAX6-209ENST00000419022 ESF1Q9H501 851 aaKnown RBP12.74□□□□□ -0.37
PAX6-209ENST00000419022 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
PAX6-209ENST00000419022 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
PAX6-209ENST00000419022 ANP32AP39687 249 aaKnown RBP12.62□□□□□ -0.39
PAX6-209ENST00000419022 NEFMP07197 916 aa12.61□□□□□ -0.39
PAX6-209ENST00000419022 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
PAX6-209ENST00000419022 A0A0G2JS52 829 aa12.59□□□□□ -0.39
PAX6-209ENST00000419022 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
PAX6-209ENST00000419022 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
PAX6-209ENST00000419022 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
PAX6-209ENST00000419022 ARID3CA6NKF2 412 aa12.57□□□□□ -0.4
PAX6-209ENST00000419022 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
PAX6-209ENST00000419022 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
PAX6-209ENST00000419022 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
PAX6-209ENST00000419022 ARXQ96QS3 562 aa12.49□□□□□ -0.41
PAX6-209ENST00000419022 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
PAX6-209ENST00000419022 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
PAX6-209ENST00000419022 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.41
PAX6-209ENST00000419022 FKBP8Q14318 412 aa12.46□□□□□ -0.42
PAX6-209ENST00000419022 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
PAX6-209ENST00000419022 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
PAX6-209ENST00000419022 ANP32BQ92688 251 aaKnown RBP12.44□□□□□ -0.42
PAX6-209ENST00000419022 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
PAX6-209ENST00000419022 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
PAX6-209ENST00000419022 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
PAX6-209ENST00000419022 UPF2Q9HAU5 1272 aaKnown RBP12.37□□□□□ -0.43
PAX6-209ENST00000419022 TONSLQ96HA7 1378 aa12.37□□□□□ -0.43
PAX6-209ENST00000419022 SALL2Q9Y467 1007 aaPredicted RBP12.37□□□□□ -0.43
PAX6-209ENST00000419022 HNRNPUQ00839 825 aaKnown RBP eCLIP12.36□□□□□ -0.43
PAX6-209ENST00000419022 ABCC9O60706 1549 aa12.36□□□□□ -0.43
PAX6-209ENST00000419022 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
PAX6-209ENST00000419022 CDK11BP21127 795 aaKnown RBP12.36□□□□□ -0.43
PAX6-209ENST00000419022 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
PAX6-209ENST00000419022 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
PAX6-209ENST00000419022 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
PAX6-209ENST00000419022 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
PAX6-209ENST00000419022 HAP1P54257 671 aaPredicted RBP12.3□□□□□ -0.44
PAX6-209ENST00000419022 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
PAX6-209ENST00000419022 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
PAX6-209ENST00000419022 CCDC136Q96JN2 1154 aa12.29□□□□□ -0.44
PAX6-209ENST00000419022 TAOK2Q9UL54 1235 aa12.27□□□□□ -0.44
PAX6-209ENST00000419022 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.45
PAX6-209ENST00000419022 NBR1Q14596 966 aa12.25□□□□□ -0.45
PAX6-209ENST00000419022 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
PAX6-209ENST00000419022 ARID4BQ4LE39 1312 aaPredicted RBP12.2□□□□□ -0.46
PAX6-209ENST00000419022 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
PAX6-209ENST00000419022 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
PAX6-209ENST00000419022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
PAX6-209ENST00000419022 MIER1Q8N108 512 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms