RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 DNAH7Q8WXX0 4024 aa2.8□□□□□ -1.96
CBX1P3-201ENST00000413296 TRBV6-1A0A0K0K1D8 114 aa2.79□□□□□ -1.96
CBX1P3-201ENST00000413296 SMIM11BQ8TCY0 68 aa2.79□□□□□ -1.96
CBX1P3-201ENST00000413296 PLAC4Q8WY50 150 aa2.79□□□□□ -1.96
CBX1P3-201ENST00000413296 LYSTQ99698 3801 aa2.79□□□□□ -1.96
CBX1P3-201ENST00000413296 CSMD3Q7Z407 3707 aa2.78□□□□□ -1.96
CBX1P3-201ENST00000413296 A0A1B0GU69 56 aa2.78□□□□□ -1.96
CBX1P3-201ENST00000413296 RPS27P42677 84 aaKnown RBP2.78□□□□□ -1.96
CBX1P3-201ENST00000413296 FXYD6P3P58550 94 aa2.78□□□□□ -1.96
CBX1P3-201ENST00000413296 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
CBX1P3-201ENST00000413296 Q6ZRX8 168 aa2.78□□□□□ -1.96
CBX1P3-201ENST00000413296 GVQW2A0A096LPI5 108 aaPredicted RBP2.77□□□□□ -1.97
CBX1P3-201ENST00000413296 LY6G6CO95867 125 aa2.77□□□□□ -1.97
CBX1P3-201ENST00000413296 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
CBX1P3-201ENST00000413296 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
CBX1P3-201ENST00000413296 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
CBX1P3-201ENST00000413296 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
CBX1P3-201ENST00000413296 G3V318 75 aa2.76□□□□□ -1.97
CBX1P3-201ENST00000413296 H3BSH0 61 aa2.76□□□□□ -1.97
CBX1P3-201ENST00000413296 DEFB136Q30KP8 78 aa2.76□□□□□ -1.97
CBX1P3-201ENST00000413296 NCR3O14931 201 aa2.75□□□□□ -1.97
CBX1P3-201ENST00000413296 HAMPP81172 84 aa2.75□□□□□ -1.97
CBX1P3-201ENST00000413296 LINC01590Q5TEZ4 76 aa2.75□□□□□ -1.97
CBX1P3-201ENST00000413296 CMC2Q9NRP2 79 aa2.75□□□□□ -1.97
CBX1P3-201ENST00000413296 HERC1Q15751 4861 aa2.75□□□□□ -1.97
CBX1P3-201ENST00000413296 STARD9Q9P2P6 4700 aa2.74□□□□□ -1.97
CBX1P3-201ENST00000413296 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
CBX1P3-201ENST00000413296 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
CBX1P3-201ENST00000413296 SPINK13Q1W4C9 94 aa2.74□□□□□ -1.97
CBX1P3-201ENST00000413296 LINC00575Q6W349 94 aa2.74□□□□□ -1.97
CBX1P3-201ENST00000413296 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
CBX1P3-201ENST00000413296 KIAA1109Q2LD37 5005 aa2.74□□□□□ -1.97
CBX1P3-201ENST00000413296 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
CBX1P3-201ENST00000413296 LINC00959A0A1B0GUT2 108 aa2.73□□□□□ -1.97
CBX1P3-201ENST00000413296 PLECQ15149 4684 aaKnown RBP2.73□□□□□ -1.97
CBX1P3-201ENST00000413296 ENHOQ6UWT2 76 aa2.73□□□□□ -1.97
CBX1P3-201ENST00000413296 HUWE1Q7Z6Z7 4374 aaKnown RBP2.73□□□□□ -1.97
CBX1P3-201ENST00000413296 LEAP2Q969E1 77 aa2.72□□□□□ -1.97
CBX1P3-201ENST00000413296 HECTD4Q9Y4D8 3996 aa2.72□□□□□ -1.97
CBX1P3-201ENST00000413296 SORL1Q92673 2214 aa2.72□□□□□ -1.97
CBX1P3-201ENST00000413296 FCER1GP30273 86 aa2.71□□□□□ -1.98
CBX1P3-201ENST00000413296 KRTAP10-1P60331 282 aa2.71□□□□□ -1.98
CBX1P3-201ENST00000413296 DMBT1Q9UGM3 2413 aaPredicted RBP2.7□□□□□ -1.98
CBX1P3-201ENST00000413296 H3BUA1 57 aa2.7□□□□□ -1.98
CBX1P3-201ENST00000413296 USMG5Q96IX5 58 aa2.7□□□□□ -1.98
CBX1P3-201ENST00000413296 UBL5Q9BZL1 73 aa2.7□□□□□ -1.98
CBX1P3-201ENST00000413296 A0A1B0GVY2 172 aa2.69□□□□□ -1.98
CBX1P3-201ENST00000413296 DEFB114Q30KQ6 69 aa2.69□□□□□ -1.98
CBX1P3-201ENST00000413296 SSBP3-AS1Q7Z2R9 100 aa2.69□□□□□ -1.98
CBX1P3-201ENST00000413296 SRRM2Q9UQ35 2752 aaKnown RBP2.69□□□□□ -1.98
CBX1P3-201ENST00000413296 NDUFA3O95167 84 aa2.68□□□□□ -1.98
CBX1P3-201ENST00000413296 COX7BP24311 80 aa2.68□□□□□ -1.98
CBX1P3-201ENST00000413296 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
CBX1P3-201ENST00000413296 KMT2AQ03164 3969 aa2.66□□□□□ -1.98
CBX1P3-201ENST00000413296 NDUFA4O00483 81 aa2.66□□□□□ -1.98
CBX1P3-201ENST00000413296 PIGYQ3MUY2 71 aa2.66□□□□□ -1.98
CBX1P3-201ENST00000413296 PCOTHQ58A44 107 aa2.66□□□□□ -1.98
CBX1P3-201ENST00000413296 TTTY10Q9BZA0 68 aa2.66□□□□□ -1.98
CBX1P3-201ENST00000413296 ABRACLQ9P1F3 81 aa2.66□□□□□ -1.98
CBX1P3-201ENST00000413296 ALMS1Q8TCU4 4167 aa2.65□□□□□ -1.98
CBX1P3-201ENST00000413296 DNAH10Q8IVF4 4471 aa2.65□□□□□ -1.98
CBX1P3-201ENST00000413296 SNRPGP62308 76 aaKnown RBP2.65□□□□□ -1.99
CBX1P3-201ENST00000413296 TOMM5Q8N4H5 51 aa2.65□□□□□ -1.99
CBX1P3-201ENST00000413296 PRH1P02810 166 aa2.64□□□□□ -1.99
CBX1P3-201ENST00000413296 APLNQ9ULZ1 77 aa2.64□□□□□ -1.99
CBX1P3-201ENST00000413296 TNCP24821 2201 aa2.64□□□□□ -1.99
CBX1P3-201ENST00000413296 DEFB135Q30KP9 77 aa2.63□□□□□ -1.99
CBX1P3-201ENST00000413296 RPL39P5Q59GN2 51 aa2.62□□□□□ -1.99
CBX1P3-201ENST00000413296 KLK9Q2XQG4 91 aa2.61□□□□□ -1.99
CBX1P3-201ENST00000413296 PKHD1P08F94 4074 aa2.61□□□□□ -1.99
CBX1P3-201ENST00000413296 VPS13DQ5THJ4 4388 aa2.6□□□□□ -1.99
CBX1P3-201ENST00000413296 K7EMI3 77 aa2.6□□□□□ -1.99
CBX1P3-201ENST00000413296 APELAP0DMC3 54 aa2.6□□□□□ -1.99
CBX1P3-201ENST00000413296 DEFB131BA0A096LNP1 70 aa2.59□□□□□ -1.99
CBX1P3-201ENST00000413296 UBE2DNLQ8IWF7 75 aa2.59□□□□□ -1.99
CBX1P3-201ENST00000413296 NMES1Q9C002 83 aa2.59□□□□□ -1.99
CBX1P3-201ENST00000413296 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
CBX1P3-201ENST00000413296 DEFB4AO15263 64 aa2.58□□□□□ -2
CBX1P3-201ENST00000413296 PKD1P98161 4303 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 DNAH2Q9P225 4427 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 DNAH11Q96DT5 4516 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 FAT2Q9NYQ8 4349 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 SPART-AS1P0CW21 52 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 TMEM167AQ8TBQ9 72 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 RHPN1-AS1Q9BWJ2 59 aa2.57□□□□□ -2
CBX1P3-201ENST00000413296 SERF2P84101 59 aa2.56□□□□□ -2
CBX1P3-201ENST00000413296 DEFB131AP59861 70 aa2.55□□□□□ -2
CBX1P3-201ENST00000413296 KRTAP12-1P59990 96 aa2.55□□□□□ -2
CBX1P3-201ENST00000413296 DYNC1H1Q14204 4646 aaKnown RBP2.55□□□□□ -2
CBX1P3-201ENST00000413296 ARHGAP5-AS1Q96IT6 56 aa2.55□□□□□ -2
CBX1P3-201ENST00000413296 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
CBX1P3-201ENST00000413296 HSPG2P98160 4391 aa2.54□□□□□ -2
CBX1P3-201ENST00000413296 APOBP04114 4563 aaKnown RBP2.54□□□□□ -2
CBX1P3-201ENST00000413296 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
CBX1P3-201ENST00000413296 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
CBX1P3-201ENST00000413296 KCNQ1DNQ9H478 68 aa2.54□□□□□ -2
CBX1P3-201ENST00000413296 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
CBX1P3-201ENST00000413296 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
CBX1P3-201ENST00000413296 K7EIM0 57 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms