RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
PBRM1-209ENST00000412587 KRTAP10-1P60331 282 aa5.05□□□□□ -1.6
PBRM1-209ENST00000412587 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
PBRM1-209ENST00000412587 C20orf166-AS1Q96NR2 134 aa5.05□□□□□ -1.6
PBRM1-209ENST00000412587 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
PBRM1-209ENST00000412587 ZANQ9Y493 2812 aa5.05□□□□□ -1.6
PBRM1-209ENST00000412587 DMXL1Q9Y485 3027 aa5.04□□□□□ -1.6
PBRM1-209ENST00000412587 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
PBRM1-209ENST00000412587 RPL37P61927 97 aaKnown RBP5.04□□□□□ -1.6
PBRM1-209ENST00000412587 H1FX-AS1Q4G0G2 97 aa5.04□□□□□ -1.6
PBRM1-209ENST00000412587 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
PBRM1-209ENST00000412587 NOTCH2NLQ7Z3S9 236 aa5.02□□□□□ -1.61
PBRM1-209ENST00000412587 USP34Q70CQ2 3546 aa5.02□□□□□ -1.61
PBRM1-209ENST00000412587 Q6ZSA8 131 aa5.02□□□□□ -1.61
PBRM1-209ENST00000412587 FLG2Q5D862 2391 aaPredicted RBP5.01□□□□□ -1.61
PBRM1-209ENST00000412587 PANO1I0J062 215 aa5□□□□□ -1.61
PBRM1-209ENST00000412587 Q5VSD8 79 aa5□□□□□ -1.61
PBRM1-209ENST00000412587 CRYBG3Q68DQ2 2970 aa4.98□□□□□ -1.61
PBRM1-209ENST00000412587 KRTAP11-1Q8IUC1 163 aa4.97□□□□□ -1.61
PBRM1-209ENST00000412587 DCHS2Q6V1P9 2916 aa4.97□□□□□ -1.61
PBRM1-209ENST00000412587 NF1P21359 2839 aa4.96□□□□□ -1.61
PBRM1-209ENST00000412587 KRTAP21-3Q3LHN1 58 aa4.95□□□□□ -1.62
PBRM1-209ENST00000412587 FBN2P35556 2912 aa4.93□□□□□ -1.62
PBRM1-209ENST00000412587 Q6ZRN7 208 aaPredicted RBP4.93□□□□□ -1.62
PBRM1-209ENST00000412587 WDFY3Q8IZQ1 3526 aa4.92□□□□□ -1.62
PBRM1-209ENST00000412587 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
PBRM1-209ENST00000412587 HRNRQ86YZ3 2850 aaPredicted RBP4.9□□□□□ -1.62
PBRM1-209ENST00000412587 DCHS1Q96JQ0 3298 aa4.9□□□□□ -1.63
PBRM1-209ENST00000412587 ASPMQ8IZT6 3477 aa4.89□□□□□ -1.63
PBRM1-209ENST00000412587 DMDP11532 3685 aa4.87□□□□□ -1.63
PBRM1-209ENST00000412587 M0R2T5 61 aa4.87□□□□□ -1.63
PBRM1-209ENST00000412587 KRTAP7-1Q8IUC3 87 aa4.83□□□□□ -1.64
PBRM1-209ENST00000412587 RELNP78509 3460 aa4.82□□□□□ -1.64
PBRM1-209ENST00000412587 LAMA5O15230 3695 aa4.81□□□□□ -1.64
PBRM1-209ENST00000412587 S4R3F8 94 aa4.8□□□□□ -1.64
PBRM1-209ENST00000412587 H0YAA0 97 aa4.79□□□□□ -1.64
PBRM1-209ENST00000412587 TENM3Q9P273 2699 aa4.79□□□□□ -1.64
PBRM1-209ENST00000412587 MXRA5Q9NR99 2828 aa4.79□□□□□ -1.64
PBRM1-209ENST00000412587 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
PBRM1-209ENST00000412587 ZFHX4Q86UP3 3567 aa4.76□□□□□ -1.65
PBRM1-209ENST00000412587 TENM1Q9UKZ4 2725 aa4.75□□□□□ -1.65
PBRM1-209ENST00000412587 P0C880 135 aa4.75□□□□□ -1.65
PBRM1-209ENST00000412587 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
PBRM1-209ENST00000412587 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
PBRM1-209ENST00000412587 CELSR1Q9NYQ6 3014 aa4.72□□□□□ -1.65
PBRM1-209ENST00000412587 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
PBRM1-209ENST00000412587 R4GN34 69 aa4.71□□□□□ -1.65
PBRM1-209ENST00000412587 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
PBRM1-209ENST00000412587 TENM2Q9NT68 2774 aa4.69□□□□□ -1.66
PBRM1-209ENST00000412587 PKD1L1Q8TDX9 2849 aa4.67□□□□□ -1.66
PBRM1-209ENST00000412587 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
PBRM1-209ENST00000412587 PDZD2O15018 2839 aa4.62□□□□□ -1.67
PBRM1-209ENST00000412587 M0QZ58 72 aa4.62□□□□□ -1.67
PBRM1-209ENST00000412587 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
PBRM1-209ENST00000412587 CUBNO60494 3623 aa4.61□□□□□ -1.67
PBRM1-209ENST00000412587 SMG1Q96Q15 3661 aaKnown RBP4.59□□□□□ -1.67
PBRM1-209ENST00000412587 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
PBRM1-209ENST00000412587 TGP01266 2768 aa4.55□□□□□ -1.68
PBRM1-209ENST00000412587 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
PBRM1-209ENST00000412587 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
PBRM1-209ENST00000412587 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
PBRM1-209ENST00000412587 SVEP1Q4LDE5 3571 aa4.55□□□□□ -1.68
PBRM1-209ENST00000412587 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
PBRM1-209ENST00000412587 VWFP04275 2813 aa4.54□□□□□ -1.68
PBRM1-209ENST00000412587 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
PBRM1-209ENST00000412587 ZFHX3Q15911 3703 aa4.47□□□□□ -1.69
PBRM1-209ENST00000412587 XP32Q5T750 250 aa4.46□□□□□ -1.7
PBRM1-209ENST00000412587 FBN3Q75N90 2809 aa4.44□□□□□ -1.7
PBRM1-209ENST00000412587 A0A1B0GVY2 172 aa4.41□□□□□ -1.7
PBRM1-209ENST00000412587 NBPF19A0A087WUL8 3843 aa4.41□□□□□ -1.7
PBRM1-209ENST00000412587 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.7
PBRM1-209ENST00000412587 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
PBRM1-209ENST00000412587 CSMD2Q7Z408 3487 aa4.37□□□□□ -1.71
PBRM1-209ENST00000412587 SPENQ96T58 3664 aaKnown RBP4.37□□□□□ -1.71
PBRM1-209ENST00000412587 TNP1P09430 55 aa4.32□□□□□ -1.72
PBRM1-209ENST00000412587 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
PBRM1-209ENST00000412587 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
PBRM1-209ENST00000412587 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
PBRM1-209ENST00000412587 ANK3Q12955 4377 aaKnown RBP4.24□□□□□ -1.73
PBRM1-209ENST00000412587 INE1O15225 51 aa4.23□□□□□ -1.73
PBRM1-209ENST00000412587 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
PBRM1-209ENST00000412587 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
PBRM1-209ENST00000412587 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
PBRM1-209ENST00000412587 BSNQ9UPA5 3926 aa4.2□□□□□ -1.74
PBRM1-209ENST00000412587 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
PBRM1-209ENST00000412587 TRRAPQ9Y4A5 3859 aa4.19□□□□□ -1.74
PBRM1-209ENST00000412587 MEGF8Q7Z7M0 2845 aa4.19□□□□□ -1.74
PBRM1-209ENST00000412587 COL7A1Q02388 2944 aa4.19□□□□□ -1.74
PBRM1-209ENST00000412587 VPS13CQ709C8 3753 aa4.11□□□□□ -1.75
PBRM1-209ENST00000412587 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
PBRM1-209ENST00000412587 KRTAP3-2Q9BYR7 98 aa4.04□□□□□ -1.76
PBRM1-209ENST00000412587 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
PBRM1-209ENST00000412587 ZNF469Q96JG9 3925 aaPredicted RBP3.96□□□□□ -1.78
PBRM1-209ENST00000412587 KRTAP4-5Q9BYR2 181 aa3.96□□□□□ -1.78
PBRM1-209ENST00000412587 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
PBRM1-209ENST00000412587 DNHD1Q96M86 4753 aa3.95□□□□□ -1.78
PBRM1-209ENST00000412587 CSMD3Q7Z407 3707 aa3.95□□□□□ -1.78
PBRM1-209ENST00000412587 HUWE1Q7Z6Z7 4374 aaKnown RBP3.93□□□□□ -1.78
PBRM1-209ENST00000412587 ALMS1Q8TCU4 4167 aa3.92□□□□□ -1.78
PBRM1-209ENST00000412587 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms