RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 NOTCH2NLQ7Z3S9 236 aa8.88□□□□□ -0.99
KDM5C-205ENST00000404049 CFAP47Q6ZTR5 3102 aa8.85□□□□□ -0.99
KDM5C-205ENST00000404049 USP34Q70CQ2 3546 aa8.84□□□□□ -0.99
KDM5C-205ENST00000404049 NSD1Q96L73 2696 aaPredicted RBP8.84□□□□□ -0.99
KDM5C-205ENST00000404049 LRBAP50851 2863 aa8.82□□□□□ -1
KDM5C-205ENST00000404049 MYO15AQ9UKN7 3530 aa8.81□□□□□ -1
KDM5C-205ENST00000404049 A8MU10 97 aa8.81□□□□□ -1
KDM5C-205ENST00000404049 HIVEP1P15822 2718 aa8.81□□□□□ -1
KDM5C-205ENST00000404049 NBEAL2Q6ZNJ1 2754 aa8.8□□□□□ -1
KDM5C-205ENST00000404049 UTP20O75691 2785 aaKnown RBP8.8□□□□□ -1
KDM5C-205ENST00000404049 LOC400499M0QZD8 3231 aa8.78□□□□□ -1
KDM5C-205ENST00000404049 CRYBG3Q68DQ2 2970 aa8.76□□□□□ -1.01
KDM5C-205ENST00000404049 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
KDM5C-205ENST00000404049 APCP25054 2843 aa8.7□□□□□ -1.02
KDM5C-205ENST00000404049 A8MUU9 505 aa8.69□□□□□ -1.02
KDM5C-205ENST00000404049 KRTAP7-1Q8IUC3 87 aa8.68□□□□□ -1.02
KDM5C-205ENST00000404049 TENM4Q6N022 2769 aa8.66□□□□□ -1.02
KDM5C-205ENST00000404049 RPS29P62273 56 aaKnown RBP8.65□□□□□ -1.02
KDM5C-205ENST00000404049 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
KDM5C-205ENST00000404049 ZANQ9Y493 2812 aa8.63□□□□□ -1.03
KDM5C-205ENST00000404049 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
KDM5C-205ENST00000404049 STAB2Q8WWQ8 2551 aa8.61□□□□□ -1.03
KDM5C-205ENST00000404049 TNP1P09430 55 aa8.61□□□□□ -1.03
KDM5C-205ENST00000404049 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
KDM5C-205ENST00000404049 NIPBLQ6KC79 2804 aaeCLIP8.57□□□□□ -1.04
KDM5C-205ENST00000404049 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
KDM5C-205ENST00000404049 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
KDM5C-205ENST00000404049 CELSR2Q9HCU4 2923 aa8.55□□□□□ -1.04
KDM5C-205ENST00000404049 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
KDM5C-205ENST00000404049 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
KDM5C-205ENST00000404049 PP632Q6XCG6 107 aa8.53□□□□□ -1.04
KDM5C-205ENST00000404049 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
KDM5C-205ENST00000404049 RELNP78509 3460 aa8.49□□□□□ -1.05
KDM5C-205ENST00000404049 DCHS1Q96JQ0 3298 aa8.48□□□□□ -1.05
KDM5C-205ENST00000404049 LAMA5O15230 3695 aa8.46□□□□□ -1.06
KDM5C-205ENST00000404049 DCHS2Q6V1P9 2916 aa8.45□□□□□ -1.06
KDM5C-205ENST00000404049 ASPMQ8IZT6 3477 aa8.44□□□□□ -1.06
KDM5C-205ENST00000404049 NF1P21359 2839 aa8.4□□□□□ -1.06
KDM5C-205ENST00000404049 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
KDM5C-205ENST00000404049 DMDP11532 3685 aa8.38□□□□□ -1.07
KDM5C-205ENST00000404049 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
KDM5C-205ENST00000404049 FBN2P35556 2912 aa8.34□□□□□ -1.07
KDM5C-205ENST00000404049 P0C880 135 aa8.34□□□□□ -1.07
KDM5C-205ENST00000404049 KRTAP21-3Q3LHN1 58 aa8.33□□□□□ -1.08
KDM5C-205ENST00000404049 H0YAA0 97 aa8.2□□□□□ -1.1
KDM5C-205ENST00000404049 MXRA5Q9NR99 2828 aa8.16□□□□□ -1.1
KDM5C-205ENST00000404049 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
KDM5C-205ENST00000404049 ZFHX4Q86UP3 3567 aa8.13□□□□□ -1.11
KDM5C-205ENST00000404049 SMG1Q96Q15 3661 aaKnown RBP8.09□□□□□ -1.11
KDM5C-205ENST00000404049 ZFHX3Q15911 3703 aa8.06□□□□□ -1.12
KDM5C-205ENST00000404049 PKD1L1Q8TDX9 2849 aa8.06□□□□□ -1.12
KDM5C-205ENST00000404049 NBPF19A0A087WUL8 3843 aa8.05□□□□□ -1.12
KDM5C-205ENST00000404049 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
KDM5C-205ENST00000404049 XP32Q5T750 250 aa8.01□□□□□ -1.13
KDM5C-205ENST00000404049 TENM1Q9UKZ4 2725 aa7.99□□□□□ -1.13
KDM5C-205ENST00000404049 CELSR1Q9NYQ6 3014 aa7.98□□□□□ -1.13
KDM5C-205ENST00000404049 TENM3Q9P273 2699 aa7.96□□□□□ -1.14
KDM5C-205ENST00000404049 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
KDM5C-205ENST00000404049 TENM2Q9NT68 2774 aa7.96□□□□□ -1.14
KDM5C-205ENST00000404049 PDZD2O15018 2839 aa7.94□□□□□ -1.14
KDM5C-205ENST00000404049 FBN1P35555 2871 aaKnown RBP7.94□□□□□ -1.14
KDM5C-205ENST00000404049 OTOGQ6ZRI0 2925 aa7.93□□□□□ -1.14
KDM5C-205ENST00000404049 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
KDM5C-205ENST00000404049 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
KDM5C-205ENST00000404049 VWFP04275 2813 aa7.84□□□□□ -1.15
KDM5C-205ENST00000404049 CSMD1Q96PZ7 3565 aa7.84□□□□□ -1.15
KDM5C-205ENST00000404049 CSMD2Q7Z408 3487 aa7.83□□□□□ -1.16
KDM5C-205ENST00000404049 KRTAP10-10P60014 251 aa7.79□□□□□ -1.16
KDM5C-205ENST00000404049 KRTAP13-3Q3SY46 172 aa7.77□□□□□ -1.17
KDM5C-205ENST00000404049 TGP01266 2768 aa7.75□□□□□ -1.17
KDM5C-205ENST00000404049 SVEP1Q4LDE5 3571 aa7.7□□□□□ -1.18
KDM5C-205ENST00000404049 SPENQ96T58 3664 aaKnown RBP7.68□□□□□ -1.18
KDM5C-205ENST00000404049 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
KDM5C-205ENST00000404049 CUBNO60494 3623 aa7.66□□□□□ -1.18
KDM5C-205ENST00000404049 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
KDM5C-205ENST00000404049 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
KDM5C-205ENST00000404049 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
KDM5C-205ENST00000404049 INE1O15225 51 aa7.48□□□□□ -1.21
KDM5C-205ENST00000404049 BSNQ9UPA5 3926 aa7.44□□□□□ -1.22
KDM5C-205ENST00000404049 TRRAPQ9Y4A5 3859 aa7.42□□□□□ -1.22
KDM5C-205ENST00000404049 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
KDM5C-205ENST00000404049 ANK3Q12955 4377 aaKnown RBP7.38□□□□□ -1.23
KDM5C-205ENST00000404049 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
KDM5C-205ENST00000404049 FBN3Q75N90 2809 aa7.28□□□□□ -1.24
KDM5C-205ENST00000404049 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
KDM5C-205ENST00000404049 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
KDM5C-205ENST00000404049 VPS13CQ709C8 3753 aa7.07□□□□□ -1.28
KDM5C-205ENST00000404049 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
KDM5C-205ENST00000404049 MEGF8Q7Z7M0 2845 aa7.01□□□□□ -1.29
KDM5C-205ENST00000404049 KRTAP3-2Q9BYR7 98 aa6.95□□□□□ -1.3
KDM5C-205ENST00000404049 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
KDM5C-205ENST00000404049 AKAP9Q99996 3911 aa6.87□□□□□ -1.31
KDM5C-205ENST00000404049 DNHD1Q96M86 4753 aa6.82□□□□□ -1.32
KDM5C-205ENST00000404049 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
KDM5C-205ENST00000404049 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
KDM5C-205ENST00000404049 HUWE1Q7Z6Z7 4374 aaKnown RBP6.79□□□□□ -1.32
KDM5C-205ENST00000404049 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
KDM5C-205ENST00000404049 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
KDM5C-205ENST00000404049 CRCT1Q9UGL9 99 aa6.75□□□□□ -1.33
KDM5C-205ENST00000404049 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms