RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 CFAP47Q6ZTR5 3102 aa8.06□□□□□ -1.12
RERE-204ENST00000400908 A8MUU9 505 aa8.06□□□□□ -1.12
RERE-204ENST00000400908 BAHCC1Q9P281 2608 aa8.05□□□□□ -1.12
RERE-204ENST00000400908 ITPR2Q14571 2701 aa8.03□□□□□ -1.12
RERE-204ENST00000400908 TNP1P09430 55 aa8.03□□□□□ -1.12
RERE-204ENST00000400908 HRNRQ86YZ3 2850 aaPredicted RBP7.99□□□□□ -1.13
RERE-204ENST00000400908 APCP25054 2843 aa7.98□□□□□ -1.13
RERE-204ENST00000400908 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
RERE-204ENST00000400908 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
RERE-204ENST00000400908 ZANQ9Y493 2812 aa7.91□□□□□ -1.14
RERE-204ENST00000400908 HIVEP1P15822 2718 aa7.91□□□□□ -1.14
RERE-204ENST00000400908 A0A087X002 238 aa7.9□□□□□ -1.15
RERE-204ENST00000400908 KRTAP11-1Q8IUC1 163 aa7.89□□□□□ -1.15
RERE-204ENST00000400908 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
RERE-204ENST00000400908 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
RERE-204ENST00000400908 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
RERE-204ENST00000400908 NBEAL1Q6ZS30 2694 aa7.87□□□□□ -1.15
RERE-204ENST00000400908 WDFY3Q8IZQ1 3526 aa7.87□□□□□ -1.15
RERE-204ENST00000400908 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
RERE-204ENST00000400908 NSD1Q96L73 2696 aaPredicted RBP7.83□□□□□ -1.16
RERE-204ENST00000400908 DMDP11532 3685 aa7.82□□□□□ -1.16
RERE-204ENST00000400908 KMT2BQ9UMN6 2715 aaPredicted RBP7.82□□□□□ -1.16
RERE-204ENST00000400908 ASH1LQ9NR48 2969 aaKnown RBP7.81□□□□□ -1.16
RERE-204ENST00000400908 LCE6AA0A183 80 aa7.81□□□□□ -1.16
RERE-204ENST00000400908 CRYBG3Q68DQ2 2970 aa7.81□□□□□ -1.16
RERE-204ENST00000400908 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
RERE-204ENST00000400908 RELNP78509 3460 aa7.8□□□□□ -1.16
RERE-204ENST00000400908 LAMA5O15230 3695 aa7.78□□□□□ -1.16
RERE-204ENST00000400908 CELSR2Q9HCU4 2923 aa7.77□□□□□ -1.17
RERE-204ENST00000400908 MUC3AQ02505 3323 aa7.75□□□□□ -1.17
RERE-204ENST00000400908 Q6ZRN7 208 aaPredicted RBP7.74□□□□□ -1.17
RERE-204ENST00000400908 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
RERE-204ENST00000400908 ASPMQ8IZT6 3477 aa7.73□□□□□ -1.17
RERE-204ENST00000400908 ZFHX4Q86UP3 3567 aa7.71□□□□□ -1.17
RERE-204ENST00000400908 NIPBLQ6KC79 2804 aaeCLIP7.71□□□□□ -1.17
RERE-204ENST00000400908 DCHS2Q6V1P9 2916 aa7.7□□□□□ -1.18
RERE-204ENST00000400908 FBN2P35556 2912 aa7.7□□□□□ -1.18
RERE-204ENST00000400908 STAB2Q8WWQ8 2551 aa7.68□□□□□ -1.18
RERE-204ENST00000400908 DCHS1Q96JQ0 3298 aa7.67□□□□□ -1.18
RERE-204ENST00000400908 NF1P21359 2839 aa7.66□□□□□ -1.18
RERE-204ENST00000400908 P0C880 135 aa7.65□□□□□ -1.18
RERE-204ENST00000400908 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
RERE-204ENST00000400908 MXRA5Q9NR99 2828 aa7.58□□□□□ -1.2
RERE-204ENST00000400908 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
RERE-204ENST00000400908 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
RERE-204ENST00000400908 KRTAP13-2Q52LG2 175 aa7.53□□□□□ -1.2
RERE-204ENST00000400908 SMG1Q96Q15 3661 aaKnown RBP7.51□□□□□ -1.21
RERE-204ENST00000400908 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
RERE-204ENST00000400908 CSMD1Q96PZ7 3565 aa7.44□□□□□ -1.22
RERE-204ENST00000400908 PDZD2O15018 2839 aa7.41□□□□□ -1.22
RERE-204ENST00000400908 H0YAA0 97 aa7.4□□□□□ -1.22
RERE-204ENST00000400908 CELSR1Q9NYQ6 3014 aa7.39□□□□□ -1.23
RERE-204ENST00000400908 NBPF19A0A087WUL8 3843 aa7.38□□□□□ -1.23
RERE-204ENST00000400908 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
RERE-204ENST00000400908 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
RERE-204ENST00000400908 SPENQ96T58 3664 aaKnown RBP7.29□□□□□ -1.24
RERE-204ENST00000400908 SVEP1Q4LDE5 3571 aa7.29□□□□□ -1.24
RERE-204ENST00000400908 TENM3Q9P273 2699 aa7.28□□□□□ -1.24
RERE-204ENST00000400908 BSNQ9UPA5 3926 aa7.27□□□□□ -1.25
RERE-204ENST00000400908 TENM1Q9UKZ4 2725 aa7.25□□□□□ -1.25
RERE-204ENST00000400908 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
RERE-204ENST00000400908 OTOGQ6ZRI0 2925 aa7.23□□□□□ -1.25
RERE-204ENST00000400908 XP32Q5T750 250 aa7.22□□□□□ -1.25
RERE-204ENST00000400908 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
RERE-204ENST00000400908 ANK3Q12955 4377 aaKnown RBP7.18□□□□□ -1.26
RERE-204ENST00000400908 VWFP04275 2813 aa7.12□□□□□ -1.27
RERE-204ENST00000400908 CSMD2Q7Z408 3487 aa7.12□□□□□ -1.27
RERE-204ENST00000400908 TENM2Q9NT68 2774 aa7.1□□□□□ -1.27
RERE-204ENST00000400908 ZFHX3Q15911 3703 aa7.09□□□□□ -1.27
RERE-204ENST00000400908 FBN1P35555 2871 aaKnown RBP7.08□□□□□ -1.28
RERE-204ENST00000400908 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
RERE-204ENST00000400908 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
RERE-204ENST00000400908 CUBNO60494 3623 aa6.98□□□□□ -1.29
RERE-204ENST00000400908 PKD1L1Q8TDX9 2849 aa6.97□□□□□ -1.29
RERE-204ENST00000400908 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
RERE-204ENST00000400908 TGP01266 2768 aa6.94□□□□□ -1.3
RERE-204ENST00000400908 TRRAPQ9Y4A5 3859 aa6.94□□□□□ -1.3
RERE-204ENST00000400908 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
RERE-204ENST00000400908 INE1O15225 51 aa6.85□□□□□ -1.31
RERE-204ENST00000400908 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
RERE-204ENST00000400908 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
RERE-204ENST00000400908 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
RERE-204ENST00000400908 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
RERE-204ENST00000400908 HUWE1Q7Z6Z7 4374 aaKnown RBP6.68□□□□□ -1.34
RERE-204ENST00000400908 AKAP9Q99996 3911 aa6.62□□□□□ -1.35
RERE-204ENST00000400908 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
RERE-204ENST00000400908 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
RERE-204ENST00000400908 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
RERE-204ENST00000400908 SRRM2Q9UQ35 2752 aaKnown RBP6.47□□□□□ -1.37
RERE-204ENST00000400908 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
RERE-204ENST00000400908 DNAH9Q9NYC9 4486 aa6.4□□□□□ -1.38
RERE-204ENST00000400908 COL7A1Q02388 2944 aa6.4□□□□□ -1.39
RERE-204ENST00000400908 ALMS1Q8TCU4 4167 aa6.33□□□□□ -1.4
RERE-204ENST00000400908 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
RERE-204ENST00000400908 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
RERE-204ENST00000400908 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
RERE-204ENST00000400908 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
RERE-204ENST00000400908 CSMD3Q7Z407 3707 aa6.3□□□□□ -1.4
RERE-204ENST00000400908 PLECQ15149 4684 aaKnown RBP6.22□□□□□ -1.41
RERE-204ENST00000400908 DNAH1Q9P2D7 4330 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms