RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 RPS28P62857 69 aaKnown RBP8.34□□□□□ -1.07
GABPA-202ENST00000400075 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
GABPA-202ENST00000400075 R4GN34 69 aa8.33□□□□□ -1.08
GABPA-202ENST00000400075 CELSR1Q9NYQ6 3014 aa8.31□□□□□ -1.08
GABPA-202ENST00000400075 H7BZZ5 65 aa8.31□□□□□ -1.08
GABPA-202ENST00000400075 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
GABPA-202ENST00000400075 A0A1B0GU33 70 aa8.26□□□□□ -1.09
GABPA-202ENST00000400075 SRRM2Q9UQ35 2752 aaKnown RBP8.25□□□□□ -1.09
GABPA-202ENST00000400075 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
GABPA-202ENST00000400075 TGP01266 2768 aa8.24□□□□□ -1.09
GABPA-202ENST00000400075 PDZD2O15018 2839 aa8.24□□□□□ -1.09
GABPA-202ENST00000400075 FBN1P35555 2871 aaKnown RBP8.22□□□□□ -1.09
GABPA-202ENST00000400075 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
GABPA-202ENST00000400075 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
GABPA-202ENST00000400075 OTOGQ6ZRI0 2925 aa8.2□□□□□ -1.1
GABPA-202ENST00000400075 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
GABPA-202ENST00000400075 RELNP78509 3460 aa8.15□□□□□ -1.11
GABPA-202ENST00000400075 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
GABPA-202ENST00000400075 Q75L30 129 aa8.13□□□□□ -1.11
GABPA-202ENST00000400075 Q5XG85 94 aa8.13□□□□□ -1.11
GABPA-202ENST00000400075 LCA10Q71F78 164 aa8.13□□□□□ -1.11
GABPA-202ENST00000400075 M0QZ58 72 aa8.12□□□□□ -1.11
GABPA-202ENST00000400075 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
GABPA-202ENST00000400075 ZFHX3Q15911 3703 aa8.11□□□□□ -1.11
GABPA-202ENST00000400075 PLAC4Q8WY50 150 aa8.11□□□□□ -1.11
GABPA-202ENST00000400075 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
GABPA-202ENST00000400075 H1FX-AS1Q4G0G2 97 aa8.09□□□□□ -1.11
GABPA-202ENST00000400075 NOTCH2NLQ7Z3S9 236 aa8.09□□□□□ -1.11
GABPA-202ENST00000400075 C20orf166-AS1Q96NR2 134 aa8.08□□□□□ -1.12
GABPA-202ENST00000400075 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
GABPA-202ENST00000400075 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
GABPA-202ENST00000400075 MUC3AQ02505 3323 aa8□□□□□ -1.13
GABPA-202ENST00000400075 KRTAP1-4P0C5Y4 121 aa7.98□□□□□ -1.13
GABPA-202ENST00000400075 Q1T7F1 81 aa7.96□□□□□ -1.14
GABPA-202ENST00000400075 A0A1B0GVY2 172 aa7.94□□□□□ -1.14
GABPA-202ENST00000400075 NBPF19A0A087WUL8 3843 aa7.92□□□□□ -1.14
GABPA-202ENST00000400075 LINC01558Q9Y6Z2 57 aa7.92□□□□□ -1.14
GABPA-202ENST00000400075 LAMA5O15230 3695 aa7.91□□□□□ -1.14
GABPA-202ENST00000400075 TPRXLQ17RH7 258 aa7.9□□□□□ -1.15
GABPA-202ENST00000400075 WDFY3Q8IZQ1 3526 aa7.89□□□□□ -1.15
GABPA-202ENST00000400075 A8MUU9 505 aa7.88□□□□□ -1.15
GABPA-202ENST00000400075 XP32Q5T750 250 aa7.88□□□□□ -1.15
GABPA-202ENST00000400075 FBN3Q75N90 2809 aa7.8□□□□□ -1.16
GABPA-202ENST00000400075 LUZP6Q538Z0 58 aa7.79□□□□□ -1.16
GABPA-202ENST00000400075 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
GABPA-202ENST00000400075 ASPMQ8IZT6 3477 aa7.74□□□□□ -1.17
GABPA-202ENST00000400075 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
GABPA-202ENST00000400075 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
GABPA-202ENST00000400075 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
GABPA-202ENST00000400075 SMG1Q96Q15 3661 aaKnown RBP7.66□□□□□ -1.18
GABPA-202ENST00000400075 ZFHX4Q86UP3 3567 aa7.65□□□□□ -1.18
GABPA-202ENST00000400075 KRTAP10-10P60014 251 aa7.65□□□□□ -1.19
GABPA-202ENST00000400075 KTN1-AS1Q86SY8 53 aa7.64□□□□□ -1.19
GABPA-202ENST00000400075 COL7A1Q02388 2944 aa7.61□□□□□ -1.19
GABPA-202ENST00000400075 Q5VV11 94 aa7.61□□□□□ -1.19
GABPA-202ENST00000400075 ROMO1P60602 79 aa7.59□□□□□ -1.19
GABPA-202ENST00000400075 DMDP11532 3685 aa7.57□□□□□ -1.2
GABPA-202ENST00000400075 CSMD2Q7Z408 3487 aa7.52□□□□□ -1.21
GABPA-202ENST00000400075 CSMD1Q96PZ7 3565 aa7.47□□□□□ -1.21
GABPA-202ENST00000400075 A8MU10 97 aa7.45□□□□□ -1.22
GABPA-202ENST00000400075 TNP1P09430 55 aa7.45□□□□□ -1.22
GABPA-202ENST00000400075 MEGF8Q7Z7M0 2845 aa7.42□□□□□ -1.22
GABPA-202ENST00000400075 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
GABPA-202ENST00000400075 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
GABPA-202ENST00000400075 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
GABPA-202ENST00000400075 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
GABPA-202ENST00000400075 TRRAPQ9Y4A5 3859 aa7.34□□□□□ -1.23
GABPA-202ENST00000400075 MT1HL1P0DM35 61 aa7.22□□□□□ -1.25
GABPA-202ENST00000400075 KRTAP4-5Q9BYR2 181 aa7.22□□□□□ -1.25
GABPA-202ENST00000400075 SPENQ96T58 3664 aaKnown RBP7.2□□□□□ -1.26
GABPA-202ENST00000400075 P0C880 135 aa7.13□□□□□ -1.27
GABPA-202ENST00000400075 CUBNO60494 3623 aa7.12□□□□□ -1.27
GABPA-202ENST00000400075 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
GABPA-202ENST00000400075 SVEP1Q4LDE5 3571 aa7.06□□□□□ -1.28
GABPA-202ENST00000400075 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
GABPA-202ENST00000400075 DNHD1Q96M86 4753 aa7.01□□□□□ -1.29
GABPA-202ENST00000400075 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
GABPA-202ENST00000400075 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
GABPA-202ENST00000400075 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
GABPA-202ENST00000400075 H0YAA0 97 aa6.92□□□□□ -1.3
GABPA-202ENST00000400075 A6NN06 94 aa6.9□□□□□ -1.3
GABPA-202ENST00000400075 BSNQ9UPA5 3926 aa6.87□□□□□ -1.31
GABPA-202ENST00000400075 HUWE1Q7Z6Z7 4374 aaKnown RBP6.81□□□□□ -1.32
GABPA-202ENST00000400075 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
GABPA-202ENST00000400075 DNAH5Q8TE73 4624 aa6.66□□□□□ -1.34
GABPA-202ENST00000400075 PLECQ15149 4684 aaKnown RBP6.65□□□□□ -1.34
GABPA-202ENST00000400075 DNAH9Q9NYC9 4486 aa6.64□□□□□ -1.35
GABPA-202ENST00000400075 ALMS1Q8TCU4 4167 aa6.63□□□□□ -1.35
GABPA-202ENST00000400075 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
GABPA-202ENST00000400075 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.35
GABPA-202ENST00000400075 KRTAP12-1P59990 96 aa6.59□□□□□ -1.36
GABPA-202ENST00000400075 ZNF469Q96JG9 3925 aaPredicted RBP6.58□□□□□ -1.36
GABPA-202ENST00000400075 VPS13CQ709C8 3753 aa6.56□□□□□ -1.36
GABPA-202ENST00000400075 AKAP9Q99996 3911 aa6.53□□□□□ -1.36
GABPA-202ENST00000400075 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
GABPA-202ENST00000400075 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
GABPA-202ENST00000400075 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
GABPA-202ENST00000400075 RYR1P21817 5038 aa6.48□□□□□ -1.37
GABPA-202ENST00000400075 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
GABPA-202ENST00000400075 H3BS24 57 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms