RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 RTL8CO15255 209 aa11.66□□□□□ -0.54
TUBA4A-202ENST00000392088 CDK2AP2O75956 126 aa11.66□□□□□ -0.54
TUBA4A-202ENST00000392088 LOC101927531A0A1B0GV80 90 aa11.65□□□□□ -0.54
TUBA4A-202ENST00000392088 ZNF861PO60384 105 aa11.65□□□□□ -0.54
TUBA4A-202ENST00000392088 KMT2AQ03164 3969 aa11.65□□□□□ -0.55
TUBA4A-202ENST00000392088 Q75L30 129 aa11.64□□□□□ -0.55
TUBA4A-202ENST00000392088 LCA10Q71F78 164 aa11.63□□□□□ -0.55
TUBA4A-202ENST00000392088 HRES1P13985 223 aa11.62□□□□□ -0.55
TUBA4A-202ENST00000392088 SPAG11AQ6PDA7 123 aa11.62□□□□□ -0.55
TUBA4A-202ENST00000392088 PLAC8Q9NZF1 115 aa11.62□□□□□ -0.55
TUBA4A-202ENST00000392088 PRKDCP78527 4128 aaKnown RBP11.61□□□□□ -0.55
TUBA4A-202ENST00000392088 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
TUBA4A-202ENST00000392088 Q5W150 140 aa11.59□□□□□ -0.55
TUBA4A-202ENST00000392088 A6NED7 52 aa11.58□□□□□ -0.56
TUBA4A-202ENST00000392088 FBN3Q75N90 2809 aa11.57□□□□□ -0.56
TUBA4A-202ENST00000392088 LINC01558Q9Y6Z2 57 aa11.57□□□□□ -0.56
TUBA4A-202ENST00000392088 SPTSSBQ8NFR3 76 aa11.53□□□□□ -0.56
TUBA4A-202ENST00000392088 KRTAP13-3Q3SY46 172 aa11.53□□□□□ -0.56
TUBA4A-202ENST00000392088 SEC61GP60059 68 aa11.52□□□□□ -0.57
TUBA4A-202ENST00000392088 CIRBP-AS1Q8TBR5 109 aa11.52□□□□□ -0.57
TUBA4A-202ENST00000392088 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
TUBA4A-202ENST00000392088 IGLV7-43P04211 117 aa11.49□□□□□ -0.57
TUBA4A-202ENST00000392088 TGP01266 2768 aa11.47□□□□□ -0.57
TUBA4A-202ENST00000392088 MEGF8Q7Z7M0 2845 aa11.46□□□□□ -0.57
TUBA4A-202ENST00000392088 ATP11AUNQ6ZP68 121 aa11.46□□□□□ -0.58
TUBA4A-202ENST00000392088 PRR26Q8N8Z3 221 aa11.46□□□□□ -0.58
TUBA4A-202ENST00000392088 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.58
TUBA4A-202ENST00000392088 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
TUBA4A-202ENST00000392088 SPINK7P58062 85 aa11.45□□□□□ -0.58
TUBA4A-202ENST00000392088 DNAH6Q9C0G6 4158 aa11.43□□□□□ -0.58
TUBA4A-202ENST00000392088 DNAH5Q8TE73 4624 aa11.39□□□□□ -0.59
TUBA4A-202ENST00000392088 A6NN06 94 aa11.38□□□□□ -0.59
TUBA4A-202ENST00000392088 C1orf134Q5TEV5 83 aa11.36□□□□□ -0.59
TUBA4A-202ENST00000392088 SSBP3-AS1Q7Z2R9 100 aa11.36□□□□□ -0.59
TUBA4A-202ENST00000392088 RETNLBQ9BQ08 111 aa11.36□□□□□ -0.59
TUBA4A-202ENST00000392088 KTN1-AS1Q86SY8 53 aa11.35□□□□□ -0.59
TUBA4A-202ENST00000392088 C8orf87E5RJ46 101 aa11.35□□□□□ -0.59
TUBA4A-202ENST00000392088 ACYP2P14621 99 aa11.32□□□□□ -0.6
TUBA4A-202ENST00000392088 LINC00313P59037 77 aa11.31□□□□□ -0.6
TUBA4A-202ENST00000392088 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
TUBA4A-202ENST00000392088 KRTAP10-2P60368 255 aa11.28□□□□□ -0.6
TUBA4A-202ENST00000392088 DMAC1Q96GE9 116 aa11.28□□□□□ -0.6
TUBA4A-202ENST00000392088 LRP1BQ9NZR2 4599 aa11.26□□□□□ -0.61
TUBA4A-202ENST00000392088 FAM229AH3BQW9 127 aa11.25□□□□□ -0.61
TUBA4A-202ENST00000392088 LY6G6CO95867 125 aa11.24□□□□□ -0.61
TUBA4A-202ENST00000392088 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
TUBA4A-202ENST00000392088 KRTAP16-1A8MUX0 517 aa11.21□□□□□ -0.61
TUBA4A-202ENST00000392088 RBM12B-AS1Q9P1G2 102 aa11.17□□□□□ -0.62
TUBA4A-202ENST00000392088 PKD1P98161 4303 aa11.15□□□□□ -0.62
TUBA4A-202ENST00000392088 C7orf65Q6ZTY9 151 aa11.14□□□□□ -0.63
TUBA4A-202ENST00000392088 KRTAP10-1P60331 282 aa11.13□□□□□ -0.63
TUBA4A-202ENST00000392088 KRTAP1-4P0C5Y4 121 aa11.11□□□□□ -0.63
TUBA4A-202ENST00000392088 A0A1B0GU69 56 aa11.1□□□□□ -0.63
TUBA4A-202ENST00000392088 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
TUBA4A-202ENST00000392088 VPS13BQ7Z7G8 4022 aa11.09□□□□□ -0.63
TUBA4A-202ENST00000392088 Q6ZSA8 131 aa11.09□□□□□ -0.63
TUBA4A-202ENST00000392088 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
TUBA4A-202ENST00000392088 HYDINQ4G0P3 5121 aa11.06□□□□□ -0.64
TUBA4A-202ENST00000392088 DNHD1Q96M86 4753 aa11.06□□□□□ -0.64
TUBA4A-202ENST00000392088 SPATA8Q6RVD6 105 aa10.99□□□□□ -0.65
TUBA4A-202ENST00000392088 PLA2G1BP04054 148 aaKnown RBP10.95□□□□□ -0.66
TUBA4A-202ENST00000392088 C4orf48Q5BLP8 95 aa10.93□□□□□ -0.66
TUBA4A-202ENST00000392088 TYMSOSQ8TAI1 123 aa10.93□□□□□ -0.66
TUBA4A-202ENST00000392088 PRAC1Q96KF2 57 aa10.93□□□□□ -0.66
TUBA4A-202ENST00000392088 MIR22HGQ0VDD5 57 aa10.92□□□□□ -0.66
TUBA4A-202ENST00000392088 ADM2Q7Z4H4 148 aa10.92□□□□□ -0.66
TUBA4A-202ENST00000392088 UQCR11O14957 56 aa10.9□□□□□ -0.66
TUBA4A-202ENST00000392088 SPINK1P00995 79 aa10.87□□□□□ -0.67
TUBA4A-202ENST00000392088 Q8N1X5 172 aa10.87□□□□□ -0.67
TUBA4A-202ENST00000392088 SACSQ9NZJ4 4579 aa10.8□□□□□ -0.68
TUBA4A-202ENST00000392088 PKHD1P08F94 4074 aa10.79□□□□□ -0.68
TUBA4A-202ENST00000392088 LINC00304Q8N9R0 145 aa10.77□□□□□ -0.69
TUBA4A-202ENST00000392088 C9orf92A6NGG3 77 aa10.68□□□□□ -0.7
TUBA4A-202ENST00000392088 RPS29P62273 56 aaKnown RBP10.67□□□□□ -0.7
TUBA4A-202ENST00000392088 DYNC1H1Q14204 4646 aaKnown RBP10.65□□□□□ -0.7
TUBA4A-202ENST00000392088 SMR3BP02814 79 aaPredicted RBP10.64□□□□□ -0.71
TUBA4A-202ENST00000392088 KRTAP3-1Q9BYR8 98 aa10.63□□□□□ -0.71
TUBA4A-202ENST00000392088 PKHD1L1Q86WI1 4243 aa10.63□□□□□ -0.71
TUBA4A-202ENST00000392088 FAT1Q14517 4588 aa10.62□□□□□ -0.71
TUBA4A-202ENST00000392088 A8MUU9 505 aa10.61□□□□□ -0.71
TUBA4A-202ENST00000392088 C20orf166-AS1Q96NR2 134 aa10.6□□□□□ -0.71
TUBA4A-202ENST00000392088 H0YAA0 97 aa10.58□□□□□ -0.72
TUBA4A-202ENST00000392088 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
TUBA4A-202ENST00000392088 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
TUBA4A-202ENST00000392088 LINC01554Q52M75 96 aa10.55□□□□□ -0.72
TUBA4A-202ENST00000392088 KRTAP10-4P60372 401 aaPredicted RBP10.48□□□□□ -0.73
TUBA4A-202ENST00000392088 A0A1B0GU33 70 aa10.45□□□□□ -0.74
TUBA4A-202ENST00000392088 H1FX-AS1Q4G0G2 97 aa10.42□□□□□ -0.74
TUBA4A-202ENST00000392088 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
TUBA4A-202ENST00000392088 FLG2Q5D862 2391 aaPredicted RBP10.35□□□□□ -0.75
TUBA4A-202ENST00000392088 COX6B2Q6YFQ2 88 aa10.34□□□□□ -0.75
TUBA4A-202ENST00000392088 FAT3Q8TDW7 4589 aa10.3□□□□□ -0.76
TUBA4A-202ENST00000392088 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
TUBA4A-202ENST00000392088 KRTAP25-1Q3LHN0 102 aa10.21□□□□□ -0.77
TUBA4A-202ENST00000392088 HSPG2P98160 4391 aa10.21□□□□□ -0.78
TUBA4A-202ENST00000392088 TNXBP22105 4242 aa10.2□□□□□ -0.78
TUBA4A-202ENST00000392088 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
TUBA4A-202ENST00000392088 RYR2Q92736 4967 aa10.15□□□□□ -0.78
TUBA4A-202ENST00000392088 CRIPTQ9P021 101 aa10.13□□□□□ -0.79
TUBA4A-202ENST00000392088 KRTAP10-6P60371 365 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms