RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 DMXL2Q8TDJ6 3036 aa8.39□□□□□ -1.07
PCDH19-202ENST00000373034 DNAH14Q0VDD8 3507 aa8.39□□□□□ -1.07
PCDH19-202ENST00000373034 H0YAA0 97 aa8.35□□□□□ -1.07
PCDH19-202ENST00000373034 HIVEP1P15822 2718 aa8.35□□□□□ -1.07
PCDH19-202ENST00000373034 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
PCDH19-202ENST00000373034 CHD9Q3L8U1 2897 aa8.32□□□□□ -1.08
PCDH19-202ENST00000373034 LAMA1P25391 3075 aa8.32□□□□□ -1.08
PCDH19-202ENST00000373034 TACC2O95359 2948 aa8.29□□□□□ -1.08
PCDH19-202ENST00000373034 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
PCDH19-202ENST00000373034 TENM1Q9UKZ4 2725 aa8.28□□□□□ -1.08
PCDH19-202ENST00000373034 KRTAP7-1Q8IUC3 87 aa8.26□□□□□ -1.09
PCDH19-202ENST00000373034 USP34Q70CQ2 3546 aa8.26□□□□□ -1.09
PCDH19-202ENST00000373034 TGP01266 2768 aa8.25□□□□□ -1.09
PCDH19-202ENST00000373034 NF1P21359 2839 aa8.23□□□□□ -1.09
PCDH19-202ENST00000373034 CELSR2Q9HCU4 2923 aa8.22□□□□□ -1.09
PCDH19-202ENST00000373034 LAMA3Q16787 3333 aa8.22□□□□□ -1.09
PCDH19-202ENST00000373034 COL6A3P12111 3177 aa8.21□□□□□ -1.1
PCDH19-202ENST00000373034 NBEAQ8NFP9 2946 aa8.2□□□□□ -1.1
PCDH19-202ENST00000373034 BRCA2P51587 3418 aa8.19□□□□□ -1.1
PCDH19-202ENST00000373034 BOD1L1Q8NFC6 3051 aa8.18□□□□□ -1.1
PCDH19-202ENST00000373034 HTTP42858 3142 aa8.15□□□□□ -1.1
PCDH19-202ENST00000373034 ZZEF1O43149 2961 aa8.15□□□□□ -1.11
PCDH19-202ENST00000373034 NIPBLQ6KC79 2804 aaeCLIP8.11□□□□□ -1.11
PCDH19-202ENST00000373034 XP32Q5T750 250 aa8.09□□□□□ -1.11
PCDH19-202ENST00000373034 ATMQ13315 3056 aa8.09□□□□□ -1.11
PCDH19-202ENST00000373034 DMXL1Q9Y485 3027 aa8.08□□□□□ -1.12
PCDH19-202ENST00000373034 FLNCQ14315 2725 aa8.07□□□□□ -1.12
PCDH19-202ENST00000373034 CFAP47Q6ZTR5 3102 aa8.06□□□□□ -1.12
PCDH19-202ENST00000373034 CDH23Q9H251 3354 aa8.05□□□□□ -1.12
PCDH19-202ENST00000373034 VCANP13611 3396 aa8.04□□□□□ -1.12
PCDH19-202ENST00000373034 PDZD2O15018 2839 aa8.04□□□□□ -1.12
PCDH19-202ENST00000373034 TNRC18O15417 2968 aaPredicted RBP8.02□□□□□ -1.13
PCDH19-202ENST00000373034 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
PCDH19-202ENST00000373034 ADGRG4Q8IZF6 3080 aa8.01□□□□□ -1.13
PCDH19-202ENST00000373034 SPEGQ15772 3267 aa8.01□□□□□ -1.13
PCDH19-202ENST00000373034 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
PCDH19-202ENST00000373034 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
PCDH19-202ENST00000373034 DCHS2Q6V1P9 2916 aa7.99□□□□□ -1.13
PCDH19-202ENST00000373034 CELSR1Q9NYQ6 3014 aa7.98□□□□□ -1.13
PCDH19-202ENST00000373034 KRTAP1-4P0C5Y4 121 aa7.86□□□□□ -1.15
PCDH19-202ENST00000373034 SRRM2Q9UQ35 2752 aaKnown RBP7.86□□□□□ -1.15
PCDH19-202ENST00000373034 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
PCDH19-202ENST00000373034 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
PCDH19-202ENST00000373034 FBN2P35556 2912 aa7.79□□□□□ -1.16
PCDH19-202ENST00000373034 SZT2Q5T011 3432 aa7.77□□□□□ -1.17
PCDH19-202ENST00000373034 ZANQ9Y493 2812 aa7.74□□□□□ -1.17
PCDH19-202ENST00000373034 TENM4Q6N022 2769 aa7.73□□□□□ -1.17
PCDH19-202ENST00000373034 INE1O15225 51 aa7.72□□□□□ -1.17
PCDH19-202ENST00000373034 KRTAP13-3Q3SY46 172 aa7.72□□□□□ -1.17
PCDH19-202ENST00000373034 VWFP04275 2813 aa7.68□□□□□ -1.18
PCDH19-202ENST00000373034 WDFY3Q8IZQ1 3526 aa7.67□□□□□ -1.18
PCDH19-202ENST00000373034 ZFHX4Q86UP3 3567 aa7.66□□□□□ -1.18
PCDH19-202ENST00000373034 KRTAP21-3Q3LHN1 58 aa7.65□□□□□ -1.18
PCDH19-202ENST00000373034 MXRA5Q9NR99 2828 aa7.65□□□□□ -1.18
PCDH19-202ENST00000373034 SPTBN5Q9NRC6 3674 aaKnown RBP7.62□□□□□ -1.19
PCDH19-202ENST00000373034 PKD1L1Q8TDX9 2849 aa7.6□□□□□ -1.19
PCDH19-202ENST00000373034 NBPF19A0A087WUL8 3843 aa7.6□□□□□ -1.19
PCDH19-202ENST00000373034 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
PCDH19-202ENST00000373034 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
PCDH19-202ENST00000373034 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
PCDH19-202ENST00000373034 EYSQ5T1H1 3165 aa7.55□□□□□ -1.2
PCDH19-202ENST00000373034 LOC400499M0QZD8 3231 aa7.54□□□□□ -1.2
PCDH19-202ENST00000373034 ASPMQ8IZT6 3477 aa7.51□□□□□ -1.21
PCDH19-202ENST00000373034 TENM2Q9NT68 2774 aa7.51□□□□□ -1.21
PCDH19-202ENST00000373034 LAMA5O15230 3695 aa7.48□□□□□ -1.21
PCDH19-202ENST00000373034 MYO15AQ9UKN7 3530 aa7.48□□□□□ -1.21
PCDH19-202ENST00000373034 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
PCDH19-202ENST00000373034 DCHS1Q96JQ0 3298 aa7.42□□□□□ -1.22
PCDH19-202ENST00000373034 ZFHX3Q15911 3703 aa7.41□□□□□ -1.22
PCDH19-202ENST00000373034 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.24
PCDH19-202ENST00000373034 CSMD1Q96PZ7 3565 aa7.29□□□□□ -1.24
PCDH19-202ENST00000373034 SMG1Q96Q15 3661 aaKnown RBP7.28□□□□□ -1.24
PCDH19-202ENST00000373034 RELNP78509 3460 aa7.27□□□□□ -1.25
PCDH19-202ENST00000373034 SPENQ96T58 3664 aaKnown RBP7.26□□□□□ -1.25
PCDH19-202ENST00000373034 DMDP11532 3685 aa7.18□□□□□ -1.26
PCDH19-202ENST00000373034 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
PCDH19-202ENST00000373034 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
PCDH19-202ENST00000373034 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
PCDH19-202ENST00000373034 FBN3Q75N90 2809 aa7.09□□□□□ -1.27
PCDH19-202ENST00000373034 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
PCDH19-202ENST00000373034 CRCT1Q9UGL9 99 aa6.96□□□□□ -1.3
PCDH19-202ENST00000373034 FBN1P35555 2871 aaKnown RBP6.92□□□□□ -1.3
PCDH19-202ENST00000373034 VPS13CQ709C8 3753 aa6.92□□□□□ -1.3
PCDH19-202ENST00000373034 OTOGQ6ZRI0 2925 aa6.9□□□□□ -1.3
PCDH19-202ENST00000373034 CUBNO60494 3623 aa6.87□□□□□ -1.31
PCDH19-202ENST00000373034 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
PCDH19-202ENST00000373034 TRRAPQ9Y4A5 3859 aa6.86□□□□□ -1.31
PCDH19-202ENST00000373034 SVEP1Q4LDE5 3571 aa6.84□□□□□ -1.31
PCDH19-202ENST00000373034 AKAP9Q99996 3911 aa6.79□□□□□ -1.32
PCDH19-202ENST00000373034 MUC3AQ02505 3323 aa6.73□□□□□ -1.33
PCDH19-202ENST00000373034 CSMD3Q7Z407 3707 aa6.73□□□□□ -1.33
PCDH19-202ENST00000373034 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.33
PCDH19-202ENST00000373034 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
PCDH19-202ENST00000373034 KRTAP10-5P60370 271 aa6.65□□□□□ -1.35
PCDH19-202ENST00000373034 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
PCDH19-202ENST00000373034 ALMS1Q8TCU4 4167 aa6.57□□□□□ -1.36
PCDH19-202ENST00000373034 CSMD2Q7Z408 3487 aa6.47□□□□□ -1.37
PCDH19-202ENST00000373034 BSNQ9UPA5 3926 aa6.44□□□□□ -1.38
PCDH19-202ENST00000373034 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
PCDH19-202ENST00000373034 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 542.2 ms