RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 LINC01558Q9Y6Z2 57 aa10.76□□□□□ -0.69
HNF4A-203ENST00000372920 PLAC8Q9NZF1 115 aa10.75□□□□□ -0.69
HNF4A-203ENST00000372920 IGLV5-52A0A0A0MRZ9 124 aa10.74□□□□□ -0.69
HNF4A-203ENST00000372920 ATP11AUNQ6ZP68 121 aa10.73□□□□□ -0.69
HNF4A-203ENST00000372920 A0A087WTM6 91 aa10.71□□□□□ -0.69
HNF4A-203ENST00000372920 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.69
HNF4A-203ENST00000372920 ZNF861PO60384 105 aa10.7□□□□□ -0.7
HNF4A-203ENST00000372920 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
HNF4A-203ENST00000372920 NUPR2A6NF83 97 aa10.69□□□□□ -0.7
HNF4A-203ENST00000372920 RTL8CO15255 209 aa10.68□□□□□ -0.7
HNF4A-203ENST00000372920 SPINK6Q6UWN8 80 aa10.68□□□□□ -0.7
HNF4A-203ENST00000372920 Q5W150 140 aa10.67□□□□□ -0.7
HNF4A-203ENST00000372920 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
HNF4A-203ENST00000372920 KTN1-AS1Q86SY8 53 aa10.66□□□□□ -0.7
HNF4A-203ENST00000372920 A6NN06 94 aa10.63□□□□□ -0.71
HNF4A-203ENST00000372920 SPINK7P58062 85 aa10.63□□□□□ -0.71
HNF4A-203ENST00000372920 KRTAP13-3Q3SY46 172 aa10.63□□□□□ -0.71
HNF4A-203ENST00000372920 HECTD4Q9Y4D8 3996 aa10.62□□□□□ -0.71
HNF4A-203ENST00000372920 VPS13DQ5THJ4 4388 aa10.62□□□□□ -0.71
HNF4A-203ENST00000372920 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
HNF4A-203ENST00000372920 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
HNF4A-203ENST00000372920 CIRBP-AS1Q8TBR5 109 aa10.59□□□□□ -0.71
HNF4A-203ENST00000372920 IGLV7-43P04211 117 aa10.55□□□□□ -0.72
HNF4A-203ENST00000372920 DNAH17Q9UFH2 4485 aa10.54□□□□□ -0.72
HNF4A-203ENST00000372920 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
HNF4A-203ENST00000372920 ACYP2P14621 99 aa10.52□□□□□ -0.73
HNF4A-203ENST00000372920 C8orf87E5RJ46 101 aa10.5□□□□□ -0.73
HNF4A-203ENST00000372920 RBM12B-AS1Q9P1G2 102 aa10.48□□□□□ -0.73
HNF4A-203ENST00000372920 KMT2AQ03164 3969 aa10.47□□□□□ -0.73
HNF4A-203ENST00000372920 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
HNF4A-203ENST00000372920 PRKDCP78527 4128 aaKnown RBP10.47□□□□□ -0.73
HNF4A-203ENST00000372920 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
HNF4A-203ENST00000372920 DMAC1Q96GE9 116 aa10.46□□□□□ -0.73
HNF4A-203ENST00000372920 C7orf65Q6ZTY9 151 aa10.45□□□□□ -0.74
HNF4A-203ENST00000372920 RETNLBQ9BQ08 111 aa10.44□□□□□ -0.74
HNF4A-203ENST00000372920 LINC00313P59037 77 aa10.44□□□□□ -0.74
HNF4A-203ENST00000372920 ALMS1Q8TCU4 4167 aa10.43□□□□□ -0.74
HNF4A-203ENST00000372920 FAM229AH3BQW9 127 aa10.41□□□□□ -0.74
HNF4A-203ENST00000372920 MEGF8Q7Z7M0 2845 aa10.4□□□□□ -0.74
HNF4A-203ENST00000372920 C1orf134Q5TEV5 83 aa10.39□□□□□ -0.75
HNF4A-203ENST00000372920 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
HNF4A-203ENST00000372920 TGP01266 2768 aa10.36□□□□□ -0.75
HNF4A-203ENST00000372920 A0A1B0GU69 56 aa10.33□□□□□ -0.76
HNF4A-203ENST00000372920 KRTAP13-2Q52LG2 175 aa10.33□□□□□ -0.76
HNF4A-203ENST00000372920 DNAH11Q96DT5 4516 aa10.33□□□□□ -0.76
HNF4A-203ENST00000372920 DNAH6Q9C0G6 4158 aa10.31□□□□□ -0.76
HNF4A-203ENST00000372920 KRTAP16-1A8MUX0 517 aa10.3□□□□□ -0.76
HNF4A-203ENST00000372920 KRTAP10-2P60368 255 aa10.27□□□□□ -0.77
HNF4A-203ENST00000372920 DNAH5Q8TE73 4624 aa10.26□□□□□ -0.77
HNF4A-203ENST00000372920 IGKV2D-30A0A075B6S6 120 aa10.24□□□□□ -0.77
HNF4A-203ENST00000372920 LY6G6CO95867 125 aa10.23□□□□□ -0.77
HNF4A-203ENST00000372920 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
HNF4A-203ENST00000372920 LRP1BQ9NZR2 4599 aa10.19□□□□□ -0.78
HNF4A-203ENST00000372920 PRAC1Q96KF2 57 aa10.19□□□□□ -0.78
HNF4A-203ENST00000372920 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
HNF4A-203ENST00000372920 UQCR11O14957 56 aa10.17□□□□□ -0.78
HNF4A-203ENST00000372920 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
HNF4A-203ENST00000372920 ADM2Q7Z4H4 148 aa10.15□□□□□ -0.78
HNF4A-203ENST00000372920 PLA2G1BP04054 148 aaKnown RBP10.13□□□□□ -0.79
HNF4A-203ENST00000372920 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
HNF4A-203ENST00000372920 Q6ZSA8 131 aa10.13□□□□□ -0.79
HNF4A-203ENST00000372920 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
HNF4A-203ENST00000372920 PKD1P98161 4303 aa10.04□□□□□ -0.8
HNF4A-203ENST00000372920 SPINK1P00995 79 aa10.04□□□□□ -0.8
HNF4A-203ENST00000372920 TYMSOSQ8TAI1 123 aa10.04□□□□□ -0.8
HNF4A-203ENST00000372920 Q8N1X5 172 aa10.02□□□□□ -0.81
HNF4A-203ENST00000372920 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
HNF4A-203ENST00000372920 FAT2Q9NYQ8 4349 aa9.97□□□□□ -0.81
HNF4A-203ENST00000372920 HYDINQ4G0P3 5121 aa9.92□□□□□ -0.82
HNF4A-203ENST00000372920 LINC01554Q52M75 96 aa9.91□□□□□ -0.82
HNF4A-203ENST00000372920 DNHD1Q96M86 4753 aa9.9□□□□□ -0.83
HNF4A-203ENST00000372920 LINC00304Q8N9R0 145 aa9.88□□□□□ -0.83
HNF4A-203ENST00000372920 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
HNF4A-203ENST00000372920 RPS29P62273 56 aaKnown RBP9.83□□□□□ -0.84
HNF4A-203ENST00000372920 H0YAA0 97 aa9.8□□□□□ -0.84
HNF4A-203ENST00000372920 C9orf92A6NGG3 77 aa9.79□□□□□ -0.84
HNF4A-203ENST00000372920 KRTAP3-1Q9BYR8 98 aa9.77□□□□□ -0.85
HNF4A-203ENST00000372920 A8MUU9 505 aa9.76□□□□□ -0.85
HNF4A-203ENST00000372920 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
HNF4A-203ENST00000372920 SACSQ9NZJ4 4579 aa9.73□□□□□ -0.85
HNF4A-203ENST00000372920 A0A1B0GU33 70 aa9.71□□□□□ -0.86
HNF4A-203ENST00000372920 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
HNF4A-203ENST00000372920 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
HNF4A-203ENST00000372920 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
HNF4A-203ENST00000372920 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
HNF4A-203ENST00000372920 DYNC1H1Q14204 4646 aaKnown RBP9.58□□□□□ -0.88
HNF4A-203ENST00000372920 FAT1Q14517 4588 aa9.57□□□□□ -0.88
HNF4A-203ENST00000372920 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
HNF4A-203ENST00000372920 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
HNF4A-203ENST00000372920 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
HNF4A-203ENST00000372920 KRTAP10-4P60372 401 aaPredicted RBP9.53□□□□□ -0.88
HNF4A-203ENST00000372920 K7ERS5 55 aa9.43□□□□□ -0.9
HNF4A-203ENST00000372920 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
HNF4A-203ENST00000372920 CRIPTQ9P021 101 aa9.39□□□□□ -0.91
HNF4A-203ENST00000372920 FLG2Q5D862 2391 aaPredicted RBP9.38□□□□□ -0.91
HNF4A-203ENST00000372920 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
HNF4A-203ENST00000372920 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
HNF4A-203ENST00000372920 H3BS24 57 aa9.31□□□□□ -0.92
HNF4A-203ENST00000372920 ROMO1P60602 79 aa9.31□□□□□ -0.92
HNF4A-203ENST00000372920 FAT3Q8TDW7 4589 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms