RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
NDC1-201ENST00000371429 ASB16-AS1Q495Z4 193 aa8.44□□□□□ -1.06
NDC1-201ENST00000371429 TENM3Q9P273 2699 aa8.44□□□□□ -1.06
NDC1-201ENST00000371429 NOTCH2NLQ7Z3S9 236 aa8.43□□□□□ -1.06
NDC1-201ENST00000371429 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
NDC1-201ENST00000371429 NF1P21359 2839 aa8.43□□□□□ -1.06
NDC1-201ENST00000371429 KRTAP13-2Q52LG2 175 aa8.43□□□□□ -1.06
NDC1-201ENST00000371429 M0QZ58 72 aa8.43□□□□□ -1.06
NDC1-201ENST00000371429 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
NDC1-201ENST00000371429 LUZP6Q538Z0 58 aa8.38□□□□□ -1.07
NDC1-201ENST00000371429 TENM1Q9UKZ4 2725 aa8.34□□□□□ -1.07
NDC1-201ENST00000371429 SPEGQ15772 3267 aa8.33□□□□□ -1.08
NDC1-201ENST00000371429 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
NDC1-201ENST00000371429 RPL37P61927 97 aaKnown RBP8.33□□□□□ -1.08
NDC1-201ENST00000371429 Q5XG85 94 aa8.33□□□□□ -1.08
NDC1-201ENST00000371429 H1FX-AS1Q4G0G2 97 aa8.31□□□□□ -1.08
NDC1-201ENST00000371429 FBN2P35556 2912 aa8.31□□□□□ -1.08
NDC1-201ENST00000371429 Q5VV11 94 aa8.3□□□□□ -1.08
NDC1-201ENST00000371429 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
NDC1-201ENST00000371429 HRNRQ86YZ3 2850 aaPredicted RBP8.3□□□□□ -1.08
NDC1-201ENST00000371429 SPTBN5Q9NRC6 3674 aaKnown RBP8.29□□□□□ -1.08
NDC1-201ENST00000371429 MXRA5Q9NR99 2828 aa8.24□□□□□ -1.09
NDC1-201ENST00000371429 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
NDC1-201ENST00000371429 LOC400499M0QZD8 3231 aa8.22□□□□□ -1.09
NDC1-201ENST00000371429 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
NDC1-201ENST00000371429 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
NDC1-201ENST00000371429 PKD1L1Q8TDX9 2849 aa8.18□□□□□ -1.1
NDC1-201ENST00000371429 PRAC1Q96KF2 57 aa8.15□□□□□ -1.1
NDC1-201ENST00000371429 ROMO1P60602 79 aa8.15□□□□□ -1.11
NDC1-201ENST00000371429 A8MUU9 505 aa8.13□□□□□ -1.11
NDC1-201ENST00000371429 MYO15AQ9UKN7 3530 aa8.11□□□□□ -1.11
NDC1-201ENST00000371429 KRTAP1-4P0C5Y4 121 aa8.08□□□□□ -1.12
NDC1-201ENST00000371429 DCHS1Q96JQ0 3298 aa8.07□□□□□ -1.12
NDC1-201ENST00000371429 CELSR1Q9NYQ6 3014 aa8.06□□□□□ -1.12
NDC1-201ENST00000371429 XP32Q5T750 250 aa7.98□□□□□ -1.13
NDC1-201ENST00000371429 VWFP04275 2813 aa7.97□□□□□ -1.13
NDC1-201ENST00000371429 A8MU10 97 aa7.95□□□□□ -1.14
NDC1-201ENST00000371429 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
NDC1-201ENST00000371429 RELNP78509 3460 aa7.9□□□□□ -1.14
NDC1-201ENST00000371429 TGP01266 2768 aa7.9□□□□□ -1.14
NDC1-201ENST00000371429 PDZD2O15018 2839 aa7.87□□□□□ -1.15
NDC1-201ENST00000371429 FBN1P35555 2871 aaKnown RBP7.82□□□□□ -1.16
NDC1-201ENST00000371429 A0A1B0GVY2 172 aa7.81□□□□□ -1.16
NDC1-201ENST00000371429 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
NDC1-201ENST00000371429 OTOGQ6ZRI0 2925 aa7.77□□□□□ -1.17
NDC1-201ENST00000371429 SRRM2Q9UQ35 2752 aaKnown RBP7.76□□□□□ -1.17
NDC1-201ENST00000371429 TNP1P09430 55 aa7.76□□□□□ -1.17
NDC1-201ENST00000371429 WDFY3Q8IZQ1 3526 aa7.76□□□□□ -1.17
NDC1-201ENST00000371429 H3BS24 57 aa7.76□□□□□ -1.17
NDC1-201ENST00000371429 KRTAP13-3Q3SY46 172 aa7.75□□□□□ -1.17
NDC1-201ENST00000371429 KRTAP10-8P60410 259 aa7.71□□□□□ -1.18
NDC1-201ENST00000371429 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
NDC1-201ENST00000371429 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
NDC1-201ENST00000371429 ZFHX3Q15911 3703 aa7.65□□□□□ -1.18
NDC1-201ENST00000371429 LAMA5O15230 3695 aa7.64□□□□□ -1.19
NDC1-201ENST00000371429 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
NDC1-201ENST00000371429 NBPF19A0A087WUL8 3843 aa7.61□□□□□ -1.19
NDC1-201ENST00000371429 A6NN06 94 aa7.61□□□□□ -1.19
NDC1-201ENST00000371429 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
NDC1-201ENST00000371429 ASPMQ8IZT6 3477 aa7.5□□□□□ -1.21
NDC1-201ENST00000371429 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
NDC1-201ENST00000371429 P0C880 135 aa7.44□□□□□ -1.22
NDC1-201ENST00000371429 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
NDC1-201ENST00000371429 ZFHX4Q86UP3 3567 aa7.41□□□□□ -1.22
NDC1-201ENST00000371429 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
NDC1-201ENST00000371429 H0YAA0 97 aa7.4□□□□□ -1.22
NDC1-201ENST00000371429 FBN3Q75N90 2809 aa7.38□□□□□ -1.23
NDC1-201ENST00000371429 DMDP11532 3685 aa7.33□□□□□ -1.24
NDC1-201ENST00000371429 SMG1Q96Q15 3661 aaKnown RBP7.3□□□□□ -1.24
NDC1-201ENST00000371429 COL7A1Q02388 2944 aa7.29□□□□□ -1.24
NDC1-201ENST00000371429 NDUFAF8A1L188 74 aa7.26□□□□□ -1.25
NDC1-201ENST00000371429 CSMD2Q7Z408 3487 aa7.26□□□□□ -1.25
NDC1-201ENST00000371429 MEGF8Q7Z7M0 2845 aa7.22□□□□□ -1.25
NDC1-201ENST00000371429 CSMD1Q96PZ7 3565 aa7.22□□□□□ -1.25
NDC1-201ENST00000371429 ANK3Q12955 4377 aaKnown RBP7.22□□□□□ -1.25
NDC1-201ENST00000371429 TRRAPQ9Y4A5 3859 aa7.13□□□□□ -1.27
NDC1-201ENST00000371429 MT1HL1P0DM35 61 aa7.12□□□□□ -1.27
NDC1-201ENST00000371429 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
NDC1-201ENST00000371429 SVEP1Q4LDE5 3571 aa7.03□□□□□ -1.28
NDC1-201ENST00000371429 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
NDC1-201ENST00000371429 CUBNO60494 3623 aa7.02□□□□□ -1.29
NDC1-201ENST00000371429 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
NDC1-201ENST00000371429 SPENQ96T58 3664 aaKnown RBP6.98□□□□□ -1.29
NDC1-201ENST00000371429 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
NDC1-201ENST00000371429 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
NDC1-201ENST00000371429 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
NDC1-201ENST00000371429 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
NDC1-201ENST00000371429 HUWE1Q7Z6Z7 4374 aaKnown RBP6.75□□□□□ -1.33
NDC1-201ENST00000371429 BSNQ9UPA5 3926 aa6.72□□□□□ -1.33
NDC1-201ENST00000371429 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
NDC1-201ENST00000371429 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
NDC1-201ENST00000371429 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
NDC1-201ENST00000371429 DNHD1Q96M86 4753 aa6.54□□□□□ -1.36
NDC1-201ENST00000371429 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
NDC1-201ENST00000371429 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
NDC1-201ENST00000371429 VPS13CQ709C8 3753 aa6.51□□□□□ -1.37
NDC1-201ENST00000371429 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
NDC1-201ENST00000371429 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
NDC1-201ENST00000371429 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
NDC1-201ENST00000371429 ZNF469Q96JG9 3925 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms