RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 Q6ZR54 194 aa6.04□□□□□ -1.44
PTPRA-203ENST00000356147 NBDYA0A0U1RRE5 68 aa6.03□□□□□ -1.44
PTPRA-203ENST00000356147 WWC2-AS2Q96NR7 200 aa6.03□□□□□ -1.44
PTPRA-203ENST00000356147 PSORS1C2Q9UIG4 136 aa6.03□□□□□ -1.44
PTPRA-203ENST00000356147 MDFIQ99750 246 aa6.03□□□□□ -1.44
PTPRA-203ENST00000356147 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
PTPRA-203ENST00000356147 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
PTPRA-203ENST00000356147 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
PTPRA-203ENST00000356147 A6NN06 94 aa6.01□□□□□ -1.45
PTPRA-203ENST00000356147 SPACA4Q8TDM5 124 aa6.01□□□□□ -1.45
PTPRA-203ENST00000356147 CIRBP-AS1Q8TBR5 109 aa6.01□□□□□ -1.45
PTPRA-203ENST00000356147 Q6ZRN7 208 aaPredicted RBP6.01□□□□□ -1.45
PTPRA-203ENST00000356147 FBN3Q75N90 2809 aa6□□□□□ -1.45
PTPRA-203ENST00000356147 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
PTPRA-203ENST00000356147 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
PTPRA-203ENST00000356147 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
PTPRA-203ENST00000356147 LINC00483Q53H64 154 aa5.97□□□□□ -1.45
PTPRA-203ENST00000356147 STARD9Q9P2P6 4700 aa5.97□□□□□ -1.45
PTPRA-203ENST00000356147 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
PTPRA-203ENST00000356147 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.45
PTPRA-203ENST00000356147 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.46
PTPRA-203ENST00000356147 A0A087WTM6 91 aa5.95□□□□□ -1.46
PTPRA-203ENST00000356147 RTL8CO15255 209 aa5.95□□□□□ -1.46
PTPRA-203ENST00000356147 ZNF861PO60384 105 aa5.94□□□□□ -1.46
PTPRA-203ENST00000356147 PRAC1Q96KF2 57 aa5.94□□□□□ -1.46
PTPRA-203ENST00000356147 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
PTPRA-203ENST00000356147 DNAH2Q9P225 4427 aa5.93□□□□□ -1.46
PTPRA-203ENST00000356147 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
PTPRA-203ENST00000356147 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
PTPRA-203ENST00000356147 DYNC2H1Q8NCM8 4307 aaKnown RBP5.91□□□□□ -1.46
PTPRA-203ENST00000356147 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
PTPRA-203ENST00000356147 VPS13DQ5THJ4 4388 aa5.89□□□□□ -1.47
PTPRA-203ENST00000356147 ACYP2P14621 99 aa5.89□□□□□ -1.47
PTPRA-203ENST00000356147 DNAH6Q9C0G6 4158 aa5.88□□□□□ -1.47
PTPRA-203ENST00000356147 LINC00313P59037 77 aa5.87□□□□□ -1.47
PTPRA-203ENST00000356147 IGLV7-43P04211 117 aa5.86□□□□□ -1.47
PTPRA-203ENST00000356147 PRKDCP78527 4128 aaKnown RBP5.86□□□□□ -1.47
PTPRA-203ENST00000356147 NUPR2A6NF83 97 aa5.85□□□□□ -1.47
PTPRA-203ENST00000356147 A0A1B0GU69 56 aa5.85□□□□□ -1.47
PTPRA-203ENST00000356147 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
PTPRA-203ENST00000356147 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
PTPRA-203ENST00000356147 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
PTPRA-203ENST00000356147 DNAH11Q96DT5 4516 aa5.84□□□□□ -1.48
PTPRA-203ENST00000356147 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
PTPRA-203ENST00000356147 SPINK1P00995 79 aa5.81□□□□□ -1.48
PTPRA-203ENST00000356147 DNHD1Q96M86 4753 aa5.81□□□□□ -1.48
PTPRA-203ENST00000356147 FAM229AH3BQW9 127 aa5.79□□□□□ -1.48
PTPRA-203ENST00000356147 LRP1BQ9NZR2 4599 aa5.78□□□□□ -1.48
PTPRA-203ENST00000356147 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
PTPRA-203ENST00000356147 C8orf87E5RJ46 101 aa5.77□□□□□ -1.49
PTPRA-203ENST00000356147 LY6G6CO95867 125 aa5.77□□□□□ -1.49
PTPRA-203ENST00000356147 KRTAP10-2P60368 255 aa5.77□□□□□ -1.49
PTPRA-203ENST00000356147 H3BS24 57 aa5.77□□□□□ -1.49
PTPRA-203ENST00000356147 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
PTPRA-203ENST00000356147 C1orf134Q5TEV5 83 aa5.76□□□□□ -1.49
PTPRA-203ENST00000356147 SSBP3-AS1Q7Z2R9 100 aa5.76□□□□□ -1.49
PTPRA-203ENST00000356147 Q8N1X5 172 aa5.75□□□□□ -1.49
PTPRA-203ENST00000356147 DNAH5Q8TE73 4624 aa5.75□□□□□ -1.49
PTPRA-203ENST00000356147 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
PTPRA-203ENST00000356147 UQCR11O14957 56 aa5.72□□□□□ -1.49
PTPRA-203ENST00000356147 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
PTPRA-203ENST00000356147 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
PTPRA-203ENST00000356147 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
PTPRA-203ENST00000356147 FLG2Q5D862 2391 aaPredicted RBP5.68□□□□□ -1.5
PTPRA-203ENST00000356147 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
PTPRA-203ENST00000356147 KRTAP10-1P60331 282 aa5.67□□□□□ -1.5
PTPRA-203ENST00000356147 FAT2Q9NYQ8 4349 aa5.66□□□□□ -1.5
PTPRA-203ENST00000356147 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
PTPRA-203ENST00000356147 HYDINQ4G0P3 5121 aa5.64□□□□□ -1.51
PTPRA-203ENST00000356147 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
PTPRA-203ENST00000356147 TYMSOSQ8TAI1 123 aa5.62□□□□□ -1.51
PTPRA-203ENST00000356147 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
PTPRA-203ENST00000356147 PKD1P98161 4303 aa5.59□□□□□ -1.52
PTPRA-203ENST00000356147 Q6ZSA8 131 aa5.57□□□□□ -1.52
PTPRA-203ENST00000356147 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
PTPRA-203ENST00000356147 H0YAA0 97 aa5.56□□□□□ -1.52
PTPRA-203ENST00000356147 CRIPTQ9P021 101 aa5.55□□□□□ -1.52
PTPRA-203ENST00000356147 PKHD1P08F94 4074 aa5.55□□□□□ -1.52
PTPRA-203ENST00000356147 SMR3BP02814 79 aaPredicted RBP5.54□□□□□ -1.52
PTPRA-203ENST00000356147 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
PTPRA-203ENST00000356147 KRTAP21-3Q3LHN1 58 aa5.52□□□□□ -1.53
PTPRA-203ENST00000356147 LINC00304Q8N9R0 145 aa5.5□□□□□ -1.53
PTPRA-203ENST00000356147 FAT1Q14517 4588 aa5.5□□□□□ -1.53
PTPRA-203ENST00000356147 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
PTPRA-203ENST00000356147 A0A1B0GU33 70 aa5.48□□□□□ -1.53
PTPRA-203ENST00000356147 A8MUU9 505 aa5.47□□□□□ -1.53
PTPRA-203ENST00000356147 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
PTPRA-203ENST00000356147 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
PTPRA-203ENST00000356147 J3QL48 77 aa5.39□□□□□ -1.55
PTPRA-203ENST00000356147 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
PTPRA-203ENST00000356147 DYNC1H1Q14204 4646 aaKnown RBP5.38□□□□□ -1.55
PTPRA-203ENST00000356147 COX6B2Q6YFQ2 88 aa5.37□□□□□ -1.55
PTPRA-203ENST00000356147 C20orf166-AS1Q96NR2 134 aa5.37□□□□□ -1.55
PTPRA-203ENST00000356147 A0A0D9SG42 100 aa5.36□□□□□ -1.55
PTPRA-203ENST00000356147 MYCBP2O75592 4640 aa5.34□□□□□ -1.56
PTPRA-203ENST00000356147 ROMO1P60602 79 aa5.32□□□□□ -1.56
PTPRA-203ENST00000356147 LRP1Q07954 4544 aaKnown RBP5.3□□□□□ -1.56
PTPRA-203ENST00000356147 K7ERS5 55 aa5.3□□□□□ -1.56
PTPRA-203ENST00000356147 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
PTPRA-203ENST00000356147 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms