RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 KRTAP1-1Q07627 177 aa5.16□□□□□ -1.58
SH3PXD2A-202ENST00000355946 FBN2P35556 2912 aa5.16□□□□□ -1.58
SH3PXD2A-202ENST00000355946 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
SH3PXD2A-202ENST00000355946 Q5XG85 94 aa5.15□□□□□ -1.59
SH3PXD2A-202ENST00000355946 MMP24-AS1A0A0U1RRL7 71 aa5.14□□□□□ -1.59
SH3PXD2A-202ENST00000355946 KRTAP16-1A8MUX0 517 aa5.13□□□□□ -1.59
SH3PXD2A-202ENST00000355946 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
SH3PXD2A-202ENST00000355946 Q5VV11 94 aa5.12□□□□□ -1.59
SH3PXD2A-202ENST00000355946 NIPBLQ6KC79 2804 aaeCLIP5.1□□□□□ -1.59
SH3PXD2A-202ENST00000355946 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
SH3PXD2A-202ENST00000355946 PANO1I0J062 215 aa5.07□□□□□ -1.6
SH3PXD2A-202ENST00000355946 MXRA5Q9NR99 2828 aa5.06□□□□□ -1.6
SH3PXD2A-202ENST00000355946 ZFHX4Q86UP3 3567 aa5.06□□□□□ -1.6
SH3PXD2A-202ENST00000355946 KRTAP10-1P60331 282 aa5.06□□□□□ -1.6
SH3PXD2A-202ENST00000355946 C20orf166-AS1Q96NR2 134 aa5.04□□□□□ -1.6
SH3PXD2A-202ENST00000355946 LINC00472Q9H8W2 130 aa5.03□□□□□ -1.6
SH3PXD2A-202ENST00000355946 SPRR1BP22528 89 aa5.02□□□□□ -1.61
SH3PXD2A-202ENST00000355946 ASB16-AS1Q495Z4 193 aa5.01□□□□□ -1.61
SH3PXD2A-202ENST00000355946 SPRR1AP35321 89 aa5.01□□□□□ -1.61
SH3PXD2A-202ENST00000355946 KRTAP10-2P60368 255 aa5.01□□□□□ -1.61
SH3PXD2A-202ENST00000355946 TENM4Q6N022 2769 aa5□□□□□ -1.61
SH3PXD2A-202ENST00000355946 Q8NDZ9 215 aa4.99□□□□□ -1.61
SH3PXD2A-202ENST00000355946 SMG1Q96Q15 3661 aaKnown RBP4.99□□□□□ -1.61
SH3PXD2A-202ENST00000355946 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
SH3PXD2A-202ENST00000355946 A8MUU9 505 aa4.97□□□□□ -1.61
SH3PXD2A-202ENST00000355946 Q6ZR54 194 aa4.96□□□□□ -1.61
SH3PXD2A-202ENST00000355946 CELSR1Q9NYQ6 3014 aa4.96□□□□□ -1.61
SH3PXD2A-202ENST00000355946 KRTAP26-1Q6PEX3 210 aa4.95□□□□□ -1.62
SH3PXD2A-202ENST00000355946 KRTAP1-5Q9BYS1 174 aa4.95□□□□□ -1.62
SH3PXD2A-202ENST00000355946 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
SH3PXD2A-202ENST00000355946 TENM3Q9P273 2699 aa4.93□□□□□ -1.62
SH3PXD2A-202ENST00000355946 TNP1P09430 55 aa4.9□□□□□ -1.63
SH3PXD2A-202ENST00000355946 OTOGQ6ZRI0 2925 aa4.89□□□□□ -1.63
SH3PXD2A-202ENST00000355946 SPENQ96T58 3664 aaKnown RBP4.88□□□□□ -1.63
SH3PXD2A-202ENST00000355946 TENM1Q9UKZ4 2725 aa4.88□□□□□ -1.63
SH3PXD2A-202ENST00000355946 CSMD1Q96PZ7 3565 aa4.87□□□□□ -1.63
SH3PXD2A-202ENST00000355946 PDZD2O15018 2839 aa4.85□□□□□ -1.63
SH3PXD2A-202ENST00000355946 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
SH3PXD2A-202ENST00000355946 A0A087X002 238 aa4.84□□□□□ -1.63
SH3PXD2A-202ENST00000355946 VWFP04275 2813 aa4.83□□□□□ -1.64
SH3PXD2A-202ENST00000355946 SVEP1Q4LDE5 3571 aa4.82□□□□□ -1.64
SH3PXD2A-202ENST00000355946 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
SH3PXD2A-202ENST00000355946 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
SH3PXD2A-202ENST00000355946 NBPF19A0A087WUL8 3843 aa4.8□□□□□ -1.64
SH3PXD2A-202ENST00000355946 FBN1P35555 2871 aaKnown RBP4.79□□□□□ -1.64
SH3PXD2A-202ENST00000355946 P0C880 135 aa4.79□□□□□ -1.64
SH3PXD2A-202ENST00000355946 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
SH3PXD2A-202ENST00000355946 A6NN06 94 aa4.78□□□□□ -1.64
SH3PXD2A-202ENST00000355946 BSNQ9UPA5 3926 aa4.78□□□□□ -1.64
SH3PXD2A-202ENST00000355946 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
SH3PXD2A-202ENST00000355946 A8MU10 97 aa4.77□□□□□ -1.65
SH3PXD2A-202ENST00000355946 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
SH3PXD2A-202ENST00000355946 KRTAP10-8P60410 259 aa4.75□□□□□ -1.65
SH3PXD2A-202ENST00000355946 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
SH3PXD2A-202ENST00000355946 CSMD2Q7Z408 3487 aa4.72□□□□□ -1.65
SH3PXD2A-202ENST00000355946 KRTAP4-16G5E9R7 235 aaPredicted RBP4.72□□□□□ -1.65
SH3PXD2A-202ENST00000355946 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.65
SH3PXD2A-202ENST00000355946 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
SH3PXD2A-202ENST00000355946 CUBNO60494 3623 aa4.7□□□□□ -1.66
SH3PXD2A-202ENST00000355946 KRTAP21-3Q3LHN1 58 aa4.69□□□□□ -1.66
SH3PXD2A-202ENST00000355946 PKD1L1Q8TDX9 2849 aa4.69□□□□□ -1.66
SH3PXD2A-202ENST00000355946 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.66
SH3PXD2A-202ENST00000355946 SRRM2Q9UQ35 2752 aaKnown RBP4.64□□□□□ -1.67
SH3PXD2A-202ENST00000355946 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
SH3PXD2A-202ENST00000355946 ANK3Q12955 4377 aaKnown RBP4.61□□□□□ -1.67
SH3PXD2A-202ENST00000355946 TGP01266 2768 aa4.61□□□□□ -1.67
SH3PXD2A-202ENST00000355946 TENM2Q9NT68 2774 aa4.61□□□□□ -1.67
SH3PXD2A-202ENST00000355946 A0A1B0GVY2 172 aa4.6□□□□□ -1.67
SH3PXD2A-202ENST00000355946 TRRAPQ9Y4A5 3859 aa4.57□□□□□ -1.68
SH3PXD2A-202ENST00000355946 KRTAP11-1Q8IUC1 163 aa4.57□□□□□ -1.68
SH3PXD2A-202ENST00000355946 VPS13CQ709C8 3753 aa4.56□□□□□ -1.68
SH3PXD2A-202ENST00000355946 XP32Q5T750 250 aa4.56□□□□□ -1.68
SH3PXD2A-202ENST00000355946 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
SH3PXD2A-202ENST00000355946 KRTAP13-1Q8IUC0 172 aa4.53□□□□□ -1.68
SH3PXD2A-202ENST00000355946 ZNF469Q96JG9 3925 aaPredicted RBP4.48□□□□□ -1.69
SH3PXD2A-202ENST00000355946 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
SH3PXD2A-202ENST00000355946 H0YAA0 97 aa4.41□□□□□ -1.7
SH3PXD2A-202ENST00000355946 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
SH3PXD2A-202ENST00000355946 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
SH3PXD2A-202ENST00000355946 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.72
SH3PXD2A-202ENST00000355946 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
SH3PXD2A-202ENST00000355946 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
SH3PXD2A-202ENST00000355946 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
SH3PXD2A-202ENST00000355946 MEGF8Q7Z7M0 2845 aa4.21□□□□□ -1.74
SH3PXD2A-202ENST00000355946 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
SH3PXD2A-202ENST00000355946 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
SH3PXD2A-202ENST00000355946 HUWE1Q7Z6Z7 4374 aaKnown RBP4.17□□□□□ -1.74
SH3PXD2A-202ENST00000355946 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
SH3PXD2A-202ENST00000355946 DNHD1Q96M86 4753 aa4.1□□□□□ -1.75
SH3PXD2A-202ENST00000355946 DNAH9Q9NYC9 4486 aa4.09□□□□□ -1.75
SH3PXD2A-202ENST00000355946 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
SH3PXD2A-202ENST00000355946 PLECQ15149 4684 aaKnown RBP3.99□□□□□ -1.77
SH3PXD2A-202ENST00000355946 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
SH3PXD2A-202ENST00000355946 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
SH3PXD2A-202ENST00000355946 PRKDCP78527 4128 aaKnown RBP3.97□□□□□ -1.77
SH3PXD2A-202ENST00000355946 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
SH3PXD2A-202ENST00000355946 INE1O15225 51 aa3.96□□□□□ -1.78
SH3PXD2A-202ENST00000355946 DNAH1Q9P2D7 4330 aa3.95□□□□□ -1.78
SH3PXD2A-202ENST00000355946 DNAH10Q8IVF4 4471 aa3.94□□□□□ -1.78
SH3PXD2A-202ENST00000355946 CMYA5Q8N3K9 4069 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms