RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
SH3PXD2A-202ENST00000355946 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
SH3PXD2A-202ENST00000355946 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
SH3PXD2A-202ENST00000355946 FAM9AQ8IZU1 332 aaPredicted RBP13.55□□□□□ -0.24
SH3PXD2A-202ENST00000355946 APLP2Q06481 763 aa13.33□□□□□ -0.28
SH3PXD2A-202ENST00000355946 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.3
SH3PXD2A-202ENST00000355946 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
SH3PXD2A-202ENST00000355946 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
SH3PXD2A-202ENST00000355946 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
SH3PXD2A-202ENST00000355946 SHROOM4Q9ULL8 1493 aa12.87□□□□□ -0.35
SH3PXD2A-202ENST00000355946 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
SH3PXD2A-202ENST00000355946 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
SH3PXD2A-202ENST00000355946 NEFLP07196 543 aa12.68□□□□□ -0.38
SH3PXD2A-202ENST00000355946 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
SH3PXD2A-202ENST00000355946 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
SH3PXD2A-202ENST00000355946 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
SH3PXD2A-202ENST00000355946 MYT1LQ9UL68 1186 aa12.61□□□□□ -0.39
SH3PXD2A-202ENST00000355946 MYT1Q01538 1121 aa12.52□□□□□ -0.41
SH3PXD2A-202ENST00000355946 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
SH3PXD2A-202ENST00000355946 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
SH3PXD2A-202ENST00000355946 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
SH3PXD2A-202ENST00000355946 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
SH3PXD2A-202ENST00000355946 CHIC1Q5VXU3 224 aa12.36□□□□□ -0.43
SH3PXD2A-202ENST00000355946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
SH3PXD2A-202ENST00000355946 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
SH3PXD2A-202ENST00000355946 SLC4A1APQ9BWU0 796 aaKnown RBP12.33□□□□□ -0.44
SH3PXD2A-202ENST00000355946 POLR3GLQ9BT43 218 aa12.3□□□□□ -0.44
SH3PXD2A-202ENST00000355946 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
SH3PXD2A-202ENST00000355946 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
SH3PXD2A-202ENST00000355946 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
SH3PXD2A-202ENST00000355946 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
SH3PXD2A-202ENST00000355946 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
SH3PXD2A-202ENST00000355946 ITGAEP38570 1179 aa12.03□□□□□ -0.48
SH3PXD2A-202ENST00000355946 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.48
SH3PXD2A-202ENST00000355946 SLC24A1O60721 1099 aa12.02□□□□□ -0.49
SH3PXD2A-202ENST00000355946 BCANQ96GW7 911 aa11.95□□□□□ -0.5
SH3PXD2A-202ENST00000355946 ABCC9O60706 1549 aa11.94□□□□□ -0.5
SH3PXD2A-202ENST00000355946 NEFMP07197 916 aa11.93□□□□□ -0.5
SH3PXD2A-202ENST00000355946 PPARGC1BQ86YN6 1023 aaKnown RBP11.91□□□□□ -0.5
SH3PXD2A-202ENST00000355946 CANXP27824 592 aaKnown RBP11.87□□□□□ -0.51
SH3PXD2A-202ENST00000355946 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
SH3PXD2A-202ENST00000355946 BCL11AQ9H165 835 aa11.79□□□□□ -0.52
SH3PXD2A-202ENST00000355946 HRCP23327 699 aa11.78□□□□□ -0.52
SH3PXD2A-202ENST00000355946 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
SH3PXD2A-202ENST00000355946 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
SH3PXD2A-202ENST00000355946 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
SH3PXD2A-202ENST00000355946 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
SH3PXD2A-202ENST00000355946 CDK11BP21127 795 aaKnown RBP11.72□□□□□ -0.53
SH3PXD2A-202ENST00000355946 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
SH3PXD2A-202ENST00000355946 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.534e-6■□□□□ 9.3
SH3PXD2A-202ENST00000355946 ANP32BQ92688 251 aaKnown RBP11.68□□□□□ -0.54
SH3PXD2A-202ENST00000355946 FBLN2P98095 1184 aa11.68□□□□□ -0.54
SH3PXD2A-202ENST00000355946 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
SH3PXD2A-202ENST00000355946 HSP90AA1P07900 732 aaKnown RBP11.61□□□□□ -0.55
SH3PXD2A-202ENST00000355946 ZCCHC6Q5VYS8 1495 aaKnown RBP11.59□□□□□ -0.55
SH3PXD2A-202ENST00000355946 PLPPR3Q6T4P5 718 aa11.59□□□□□ -0.55
SH3PXD2A-202ENST00000355946 ANP32CO43423 234 aa11.58□□□□□ -0.56
SH3PXD2A-202ENST00000355946 DIEXFQ68CQ4 756 aaKnown RBP11.57□□□□□ -0.56
SH3PXD2A-202ENST00000355946 NEUROD1Q13562 356 aa11.56□□□□□ -0.56
SH3PXD2A-202ENST00000355946 A0A0G2JS52 829 aa11.56□□□□□ -0.56
SH3PXD2A-202ENST00000355946 CCDC180Q9P1Z9 1646 aa11.55□□□□□ -0.56
SH3PXD2A-202ENST00000355946 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
SH3PXD2A-202ENST00000355946 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
SH3PXD2A-202ENST00000355946 UPF2Q9HAU5 1272 aaKnown RBP11.5□□□□□ -0.57
SH3PXD2A-202ENST00000355946 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
SH3PXD2A-202ENST00000355946 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
SH3PXD2A-202ENST00000355946 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
SH3PXD2A-202ENST00000355946 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.57
SH3PXD2A-202ENST00000355946 SCRIBQ14160 1630 aa11.45□□□□□ -0.58
SH3PXD2A-202ENST00000355946 EIF5BO60841 1220 aaKnown RBP11.45□□□□□ -0.58
SH3PXD2A-202ENST00000355946 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
SH3PXD2A-202ENST00000355946 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
SH3PXD2A-202ENST00000355946 MYH16Q9H6N6 1097 aa11.4□□□□□ -0.59
SH3PXD2A-202ENST00000355946 C14orf37Q86TY3 774 aa11.37□□□□□ -0.59
SH3PXD2A-202ENST00000355946 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
SH3PXD2A-202ENST00000355946 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
SH3PXD2A-202ENST00000355946 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
SH3PXD2A-202ENST00000355946 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.32□□□□□ -0.6
SH3PXD2A-202ENST00000355946 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
SH3PXD2A-202ENST00000355946 NPHP1O15259 732 aa11.31□□□□□ -0.6
SH3PXD2A-202ENST00000355946 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
SH3PXD2A-202ENST00000355946 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
SH3PXD2A-202ENST00000355946 PPP1R15AO75807 674 aaPredicted RBP11.28□□□□□ -0.6
SH3PXD2A-202ENST00000355946 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
SH3PXD2A-202ENST00000355946 WDR43Q15061 677 aaKnown RBP eCLIP11.22□□□□□ -0.61
SH3PXD2A-202ENST00000355946 ARXQ96QS3 562 aa11.22□□□□□ -0.61
SH3PXD2A-202ENST00000355946 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
SH3PXD2A-202ENST00000355946 TONSLQ96HA7 1378 aa11.21□□□□□ -0.62
SH3PXD2A-202ENST00000355946 CLSTN1O94985 981 aa11.19□□□□□ -0.62
SH3PXD2A-202ENST00000355946 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
SH3PXD2A-202ENST00000355946 NBR1Q14596 966 aa11.19□□□□□ -0.62
SH3PXD2A-202ENST00000355946 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
SH3PXD2A-202ENST00000355946 CASC1Q6TDU7 716 aa11.18□□□□□ -0.62
SH3PXD2A-202ENST00000355946 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
SH3PXD2A-202ENST00000355946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■■□□□ 14.3
SH3PXD2A-202ENST00000355946 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
SH3PXD2A-202ENST00000355946 TRIM44Q96DX7 344 aaPredicted RBP11.16□□□□□ -0.62
SH3PXD2A-202ENST00000355946 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
SH3PXD2A-202ENST00000355946 GOLGA6L22H0YM25 854 aa11.14□□□□□ -0.63
SH3PXD2A-202ENST00000355946 GOLGA6L6A8MZA4 724 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms