RNA–Protein interactions for RNA: ENST00000354189.9

CASC1-202, Transcript of cancer susceptibility 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASC1, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-202ENST00000354189 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
CASC1-202ENST00000354189 SPTAN1Q13813 2472 aaKnown RBP2.4□□□□□ -2.02
CASC1-202ENST00000354189 ATMQ13315 3056 aa2.4□□□□□ -2.03
CASC1-202ENST00000354189 LRBAP50851 2863 aa2.39□□□□□ -2.03
CASC1-202ENST00000354189 HIVEP2P31629 2446 aa2.39□□□□□ -2.03
CASC1-202ENST00000354189 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
CASC1-202ENST00000354189 ANKRD11Q6UB99 2663 aaPredicted RBP2.38□□□□□ -2.03
CASC1-202ENST00000354189 A0A0D9SG42 100 aa2.38□□□□□ -2.03
CASC1-202ENST00000354189 KRTAP13-2Q52LG2 175 aa2.38□□□□□ -2.03
CASC1-202ENST00000354189 UBR5O95071 2799 aaPredicted RBP2.37□□□□□ -2.03
CASC1-202ENST00000354189 AKAP9Q99996 3911 aa2.36□□□□□ -2.03
CASC1-202ENST00000354189 SMG1Q96Q15 3661 aaKnown RBP2.35□□□□□ -2.03
CASC1-202ENST00000354189 F8P00451 2351 aa2.35□□□□□ -2.03
CASC1-202ENST00000354189 APCP25054 2843 aa2.34□□□□□ -2.03
CASC1-202ENST00000354189 RELNP78509 3460 aa2.34□□□□□ -2.03
CASC1-202ENST00000354189 CACNA1AO00555 2505 aa2.34□□□□□ -2.03
CASC1-202ENST00000354189 CEP295Q9C0D2 2601 aa2.34□□□□□ -2.04
CASC1-202ENST00000354189 CELSR1Q9NYQ6 3014 aa2.34□□□□□ -2.04
CASC1-202ENST00000354189 KRTAP10-6P60371 365 aaPredicted RBP2.33□□□□□ -2.04
CASC1-202ENST00000354189 TLN1Q9Y490 2541 aaKnown RBP2.33□□□□□ -2.04
CASC1-202ENST00000354189 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
CASC1-202ENST00000354189 DCHS2Q6V1P9 2916 aa2.33□□□□□ -2.04
CASC1-202ENST00000354189 HIVEP3Q5T1R4 2406 aa2.32□□□□□ -2.04
CASC1-202ENST00000354189 ADGRG4Q8IZF6 3080 aa2.32□□□□□ -2.04
CASC1-202ENST00000354189 NF1P21359 2839 aa2.32□□□□□ -2.04
CASC1-202ENST00000354189 CRYBG3Q68DQ2 2970 aa2.32□□□□□ -2.04
CASC1-202ENST00000354189 PTPN13Q12923 2485 aa2.32□□□□□ -2.04
CASC1-202ENST00000354189 FAM208BQ5VWN6 2430 aa2.31□□□□□ -2.04
CASC1-202ENST00000354189 PIEZO1Q92508 2521 aa2.31□□□□□ -2.04
CASC1-202ENST00000354189 J3QKU1 62 aa2.31□□□□□ -2.04
CASC1-202ENST00000354189 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
CASC1-202ENST00000354189 KRTAP10-9P60411 292 aa2.31□□□□□ -2.04
CASC1-202ENST00000354189 PKD1L2Q7Z442 2459 aa2.31□□□□□ -2.04
CASC1-202ENST00000354189 CCDC168Q8NDH2 2452 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 TEX15Q9BXT5 2789 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 JMJD1CQ15652 2540 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 TLN2Q9Y4G6 2542 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 HRNRQ86YZ3 2850 aaPredicted RBP2.3□□□□□ -2.04
CASC1-202ENST00000354189 SONP18583 2426 aaKnown RBP2.3□□□□□ -2.04
CASC1-202ENST00000354189 KRTAP10-11P60412 298 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 NAV2Q8IVL1 2488 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 CHD8Q9HCK8 2581 aa2.3□□□□□ -2.04
CASC1-202ENST00000354189 IGSF10Q6WRI0 2623 aa2.28□□□□□ -2.04
CASC1-202ENST00000354189 USP24Q9UPU5 2620 aa2.28□□□□□ -2.04
CASC1-202ENST00000354189 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
CASC1-202ENST00000354189 ACACBO00763 2458 aa2.27□□□□□ -2.05
CASC1-202ENST00000354189 VPS13CQ709C8 3753 aa2.27□□□□□ -2.05
CASC1-202ENST00000354189 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
CASC1-202ENST00000354189 VWFP04275 2813 aa2.27□□□□□ -2.05
CASC1-202ENST00000354189 ZNF462Q96JM2 2506 aa2.26□□□□□ -2.05
CASC1-202ENST00000354189 DOPEY1Q5JWR5 2465 aa2.26□□□□□ -2.05
CASC1-202ENST00000354189 M0QZ58 72 aa2.26□□□□□ -2.05
CASC1-202ENST00000354189 SETXQ7Z333 2677 aaKnown RBP2.26□□□□□ -2.05
CASC1-202ENST00000354189 USP9XQ93008 2570 aaPredicted RBP2.26□□□□□ -2.05
CASC1-202ENST00000354189 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
CASC1-202ENST00000354189 SRRM2Q9UQ35 2752 aaKnown RBP2.25□□□□□ -2.05
CASC1-202ENST00000354189 NBPF19A0A087WUL8 3843 aa2.25□□□□□ -2.05
CASC1-202ENST00000354189 CFAP46Q8IYW2 2715 aa2.25□□□□□ -2.05
CASC1-202ENST00000354189 COL6A5A8TX70 2615 aa2.25□□□□□ -2.05
CASC1-202ENST00000354189 FBN2P35556 2912 aa2.24□□□□□ -2.05
CASC1-202ENST00000354189 KRTAP1-1Q07627 177 aa2.24□□□□□ -2.05
CASC1-202ENST00000354189 SVEP1Q4LDE5 3571 aa2.23□□□□□ -2.05
CASC1-202ENST00000354189 CSMD2Q7Z408 3487 aa2.23□□□□□ -2.05
CASC1-202ENST00000354189 ANK3Q12955 4377 aaKnown RBP2.23□□□□□ -2.05
CASC1-202ENST00000354189 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
CASC1-202ENST00000354189 MEGF8Q7Z7M0 2845 aa2.23□□□□□ -2.05
CASC1-202ENST00000354189 KRTAP1-4P0C5Y4 121 aa2.22□□□□□ -2.05
CASC1-202ENST00000354189 UTP20O75691 2785 aaKnown RBP2.22□□□□□ -2.05
CASC1-202ENST00000354189 ZNF469Q96JG9 3925 aaPredicted RBP2.22□□□□□ -2.05
CASC1-202ENST00000354189 FLNCQ14315 2725 aa2.21□□□□□ -2.06
CASC1-202ENST00000354189 ZFYVE26Q68DK2 2539 aa2.21□□□□□ -2.06
CASC1-202ENST00000354189 SMR3AQ99954 134 aa2.2□□□□□ -2.06
CASC1-202ENST00000354189 PDZD2O15018 2839 aa2.2□□□□□ -2.06
CASC1-202ENST00000354189 A0A1B0GVY2 172 aa2.2□□□□□ -2.06
CASC1-202ENST00000354189 MTORP42345 2549 aa2.19□□□□□ -2.06
CASC1-202ENST00000354189 TENM4Q6N022 2769 aa2.19□□□□□ -2.06
CASC1-202ENST00000354189 CENPEQ02224 2701 aa2.19□□□□□ -2.06
CASC1-202ENST00000354189 EPG5Q9HCE0 2579 aa2.19□□□□□ -2.06
CASC1-202ENST00000354189 MYO18BQ8IUG5 2567 aa2.19□□□□□ -2.06
CASC1-202ENST00000354189 NBEAL2Q6ZNJ1 2754 aa2.19□□□□□ -2.06
CASC1-202ENST00000354189 USP9YO00507 2555 aaPredicted RBP2.18□□□□□ -2.06
CASC1-202ENST00000354189 GCN1Q92616 2671 aaKnown RBP2.18□□□□□ -2.06
CASC1-202ENST00000354189 RPS29P62273 56 aaKnown RBP2.18□□□□□ -2.06
CASC1-202ENST00000354189 CUBNO60494 3623 aa2.17□□□□□ -2.06
CASC1-202ENST00000354189 BAHCC1Q9P281 2608 aa2.17□□□□□ -2.06
CASC1-202ENST00000354189 KRTAP10-3P60369 221 aa2.17□□□□□ -2.06
CASC1-202ENST00000354189 Q5VSD8 79 aa2.17□□□□□ -2.06
CASC1-202ENST00000354189 LRRK2Q5S007 2527 aa2.16□□□□□ -2.06
CASC1-202ENST00000354189 DMBT1Q9UGM3 2413 aaPredicted RBP2.16□□□□□ -2.06
CASC1-202ENST00000354189 KRTAP1-5Q9BYS1 174 aa2.16□□□□□ -2.06
CASC1-202ENST00000354189 POLQO75417 2590 aa2.16□□□□□ -2.06
CASC1-202ENST00000354189 ITPR3Q14573 2671 aa2.15□□□□□ -2.07
CASC1-202ENST00000354189 MYO9AB2RTY4 2548 aa2.15□□□□□ -2.07
CASC1-202ENST00000354189 ABCA12Q86UK0 2595 aa2.14□□□□□ -2.07
CASC1-202ENST00000354189 VPS13DQ5THJ4 4388 aa2.14□□□□□ -2.07
CASC1-202ENST00000354189 NIPBLQ6KC79 2804 aaeCLIP2.14□□□□□ -2.07
CASC1-202ENST00000354189 ZANQ9Y493 2812 aa2.14□□□□□ -2.07
CASC1-202ENST00000354189 MXRA5Q9NR99 2828 aa2.13□□□□□ -2.07
CASC1-202ENST00000354189 HELZ2Q9BYK8 2649 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms