RNA–Protein interactions for RNA: ENST00000354189.9

CASC1-202, Transcript of cancer susceptibility 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASC1, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-202ENST00000354189 AEBP2Q6ZN18 517 aaPredicted RBP11.79□□□□□ -0.52
CASC1-202ENST00000354189 CHIC1Q5VXU3 224 aa11.5□□□□□ -0.57
CASC1-202ENST00000354189 PHF23Q9BUL5 403 aaPredicted RBP10.25□□□□□ -0.77
CASC1-202ENST00000354189 SENP3Q9H4L4 574 aaPredicted RBP9.8□□□□□ -0.84
CASC1-202ENST00000354189 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
CASC1-202ENST00000354189 PLPPR3Q6T4P5 718 aa9.35□□□□□ -0.91
CASC1-202ENST00000354189 FOXD1Q16676 465 aa9.21□□□□□ -0.94
CASC1-202ENST00000354189 PPP6R1Q9UPN7 881 aa9.04□□□□□ -0.96
CASC1-202ENST00000354189 ADRA2BP18089 450 aa9.01□□□□□ -0.97
CASC1-202ENST00000354189 DAXXQ9UER7 740 aaPredicted RBP8.91□□□□□ -0.98
CASC1-202ENST00000354189 MYT1Q01538 1121 aa8.81□□□□□ -1
CASC1-202ENST00000354189 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
CASC1-202ENST00000354189 EHMT2Q96KQ7 1210 aa8.78□□□□□ -1
CASC1-202ENST00000354189 PIAS4Q8N2W9 510 aaPredicted RBP8.68□□□□□ -1.02
CASC1-202ENST00000354189 NCBP3Q53F19 620 aaKnown RBP8.66□□□□□ -1.02
CASC1-202ENST00000354189 PELP1Q8IZL8 1130 aaKnown RBP8.63□□□□□ -1.03
CASC1-202ENST00000354189 APLP2Q06481 763 aa8.6□□□□□ -1.03
CASC1-202ENST00000354189 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
CASC1-202ENST00000354189 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
CASC1-202ENST00000354189 PRKCSHP14314 528 aaPredicted RBP8.52□□□□□ -1.05
CASC1-202ENST00000354189 AMER1Q5JTC6 1135 aaPredicted RBP8.45□□□□□ -1.06
CASC1-202ENST00000354189 ARXQ96QS3 562 aa8.38□□□□□ -1.07
CASC1-202ENST00000354189 KCNA4P22459 653 aa8.37□□□□□ -1.07
CASC1-202ENST00000354189 PPP4R3CPQ6ZMV5 832 aa8.32□□□□□ -1.08
CASC1-202ENST00000354189 MSH5O43196 834 aa8.28□□□□□ -1.08
CASC1-202ENST00000354189 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
CASC1-202ENST00000354189 MAPK8IP2Q13387 824 aaPredicted RBP8.17□□□□□ -1.1
CASC1-202ENST00000354189 RANGAP1P46060 587 aaPredicted RBP8.17□□□□□ -1.1
CASC1-202ENST00000354189 CSRNP3Q8WYN3 585 aa8.16□□□□□ -1.1
CASC1-202ENST00000354189 HOMEZQ8IX15 550 aa8.08□□□□□ -1.12
CASC1-202ENST00000354189 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
CASC1-202ENST00000354189 NPM3O75607 178 aaKnown RBP8.05□□□□□ -1.12
CASC1-202ENST00000354189 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
CASC1-202ENST00000354189 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
CASC1-202ENST00000354189 SCAF1Q9H7N4 1312 aaKnown RBP8.01□□□□□ -1.13
CASC1-202ENST00000354189 CNKSR2Q8WXI2 1034 aa7.99□□□□□ -1.13
CASC1-202ENST00000354189 KLHL34Q8N239 644 aa7.95□□□□□ -1.14
CASC1-202ENST00000354189 BCANQ96GW7 911 aa7.95□□□□□ -1.14
CASC1-202ENST00000354189 SLC4A1APQ9BWU0 796 aaKnown RBP7.9□□□□□ -1.14
CASC1-202ENST00000354189 PODXL2Q9NZ53 605 aa7.9□□□□□ -1.15
CASC1-202ENST00000354189 TPRNQ4KMQ1 711 aa7.89□□□□□ -1.15
CASC1-202ENST00000354189 DMRT2Q9Y5R5 561 aa7.87□□□□□ -1.15
CASC1-202ENST00000354189 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
CASC1-202ENST00000354189 RNF216Q9NWF9 866 aaPredicted RBP7.8□□□□□ -1.16
CASC1-202ENST00000354189 HOXD11P31277 338 aaPredicted RBP7.76□□□□□ -1.17
CASC1-202ENST00000354189 PLCB2Q00722 1185 aa7.76□□□□□ -1.17
CASC1-202ENST00000354189 NPM2Q86SE8 214 aaKnown RBP7.76□□□□□ -1.17
CASC1-202ENST00000354189 ZBTB22O15209 634 aa7.75□□□□□ -1.17
CASC1-202ENST00000354189 PLEKHG5O94827 1062 aa7.71□□□□□ -1.18
CASC1-202ENST00000354189 FBXO3Q9UK99 471 aa7.68□□□□□ -1.18
CASC1-202ENST00000354189 HAP1P54257 671 aaPredicted RBP7.66□□□□□ -1.18
CASC1-202ENST00000354189 C14orf37Q86TY3 774 aa7.64□□□□□ -1.19
CASC1-202ENST00000354189 TMEM132AQ24JP5 1023 aa7.63□□□□□ -1.19
CASC1-202ENST00000354189 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
CASC1-202ENST00000354189 HRCP23327 699 aa7.62□□□□□ -1.19
CASC1-202ENST00000354189 DNAJC5BQ9UF47 199 aa7.62□□□□□ -1.19
CASC1-202ENST00000354189 SLC4A2P04920 1241 aa7.61□□□□□ -1.19
CASC1-202ENST00000354189 DCAF8L1A6NGE4 600 aa7.6□□□□□ -1.19
CASC1-202ENST00000354189 FOXD4L1Q9NU39 408 aa7.54□□□□□ -1.2
CASC1-202ENST00000354189 TRIM26Q12899 539 aaPredicted RBP7.53□□□□□ -1.2
CASC1-202ENST00000354189 VSIG10Q8N0Z9 540 aa7.52□□□□□ -1.2
CASC1-202ENST00000354189 DCAF8L2P0C7V8 631 aa7.5□□□□□ -1.21
CASC1-202ENST00000354189 LOC105371045A0A1W2PR82 267 aa7.48□□□□□ -1.21
CASC1-202ENST00000354189 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
CASC1-202ENST00000354189 POTEDQ86YR6 584 aa7.44□□□□□ -1.22
CASC1-202ENST00000354189 FAM9AQ8IZU1 332 aaPredicted RBP7.42□□□□□ -1.22
CASC1-202ENST00000354189 SUPT5HO00267 1087 aaKnown RBP7.42□□□□□ -1.22
CASC1-202ENST00000354189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.41□□□□□ -1.22
CASC1-202ENST00000354189 CENPBP07199 599 aaPredicted RBP7.4□□□□□ -1.23
CASC1-202ENST00000354189 UBE2Q2Q8WVN8 375 aa7.4□□□□□ -1.23
CASC1-202ENST00000354189 UBTFP17480 764 aaKnown RBP7.39□□□□□ -1.23
CASC1-202ENST00000354189 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
CASC1-202ENST00000354189 U3KPZ7 1027 aaPredicted RBP7.36□□□□□ -1.23
CASC1-202ENST00000354189 CHMP4AQ9BY43 222 aa7.36□□□□□ -1.23
CASC1-202ENST00000354189 MYCNP04198 464 aaPredicted RBP7.34□□□□□ -1.23
CASC1-202ENST00000354189 CDK11AQ9UQ88 783 aaPredicted RBP7.33□□□□□ -1.24
CASC1-202ENST00000354189 CDK11BP21127 795 aaKnown RBP7.32□□□□□ -1.24
CASC1-202ENST00000354189 ATF5Q9Y2D1 282 aaPredicted RBP7.32□□□□□ -1.24
CASC1-202ENST00000354189 SAMD1Q6SPF0 538 aaPredicted RBP7.3□□□□□ -1.24
CASC1-202ENST00000354189 FBLN2P98095 1184 aa7.29□□□□□ -1.24
CASC1-202ENST00000354189 PDE4CQ08493 712 aa7.29□□□□□ -1.24
CASC1-202ENST00000354189 BRD2P25440 801 aaKnown RBP7.28□□□□□ -1.24
CASC1-202ENST00000354189 FKBP8Q14318 412 aa7.28□□□□□ -1.24
CASC1-202ENST00000354189 SHROOM4Q9ULL8 1493 aa7.28□□□□□ -1.24
CASC1-202ENST00000354189 NEFLP07196 543 aa7.25□□□□□ -1.25
CASC1-202ENST00000354189 TAF7LQ5H9L4 462 aa7.25□□□□□ -1.25
CASC1-202ENST00000354189 HMGB1P09429 215 aaKnown RBP7.25□□□□□ -1.25
CASC1-202ENST00000354189 HSP90B1P14625 803 aaKnown RBP7.21□□□□□ -1.25
CASC1-202ENST00000354189 DHX37Q8IY37 1157 aaKnown RBP7.21□□□□□ -1.25
CASC1-202ENST00000354189 IGSF3O75054 1194 aa7.2□□□□□ -1.26
CASC1-202ENST00000354189 RNF39Q9H2S5 420 aa7.2□□□□□ -1.26
CASC1-202ENST00000354189 ACIN1Q9UKV3 1341 aaKnown RBP7.19□□□□□ -1.26
CASC1-202ENST00000354189 ANP32EQ9BTT0 268 aa7.19□□□□□ -1.26
CASC1-202ENST00000354189 PPARGC1BQ86YN6 1023 aaKnown RBP7.18□□□□□ -1.26
CASC1-202ENST00000354189 SPINK5Q9NQ38 1064 aaPredicted RBP7.18□□□□□ -1.26
CASC1-202ENST00000354189 ATXN8OSP0DMR3 200 aa7.17□□□□□ -1.26
CASC1-202ENST00000354189 PKNOX2Q96KN3 472 aa7.17□□□□□ -1.26
CASC1-202ENST00000354189 CCDC9Q9Y3X0 531 aaKnown RBP7.17□□□□□ -1.26
CASC1-202ENST00000354189 ZEB1P37275 1124 aaPredicted RBP7.14□□□□□ -1.27
CASC1-202ENST00000354189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms