RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
APP-202ENST00000348990 ACYP2P14621 99 aa10.6□□□□□ -0.71
APP-202ENST00000348990 SPACA4Q8TDM5 124 aa10.59□□□□□ -0.71
APP-202ENST00000348990 PLAC8Q9NZF1 115 aa10.57□□□□□ -0.72
APP-202ENST00000348990 DNAH1Q9P2D7 4330 aa10.57□□□□□ -0.72
APP-202ENST00000348990 PRAC1Q96KF2 57 aa10.57□□□□□ -0.72
APP-202ENST00000348990 HUWE1Q7Z6Z7 4374 aaKnown RBP10.56□□□□□ -0.72
APP-202ENST00000348990 C4orf48Q5BLP8 95 aa10.56□□□□□ -0.72
APP-202ENST00000348990 ZNF861PO60384 105 aa10.55□□□□□ -0.72
APP-202ENST00000348990 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
APP-202ENST00000348990 A0A1B0GU69 56 aa10.53□□□□□ -0.72
APP-202ENST00000348990 IGLV5-52A0A0A0MRZ9 124 aa10.52□□□□□ -0.72
APP-202ENST00000348990 RTL8CO15255 209 aa10.52□□□□□ -0.73
APP-202ENST00000348990 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
APP-202ENST00000348990 LINC00313P59037 77 aa10.5□□□□□ -0.73
APP-202ENST00000348990 A0A087WTM6 91 aa10.49□□□□□ -0.73
APP-202ENST00000348990 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
APP-202ENST00000348990 C8orf87E5RJ46 101 aa10.46□□□□□ -0.73
APP-202ENST00000348990 ADM2Q7Z4H4 148 aa10.45□□□□□ -0.74
APP-202ENST00000348990 CMYA5Q8N3K9 4069 aa10.45□□□□□ -0.74
APP-202ENST00000348990 TGP01266 2768 aa10.44□□□□□ -0.74
APP-202ENST00000348990 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
APP-202ENST00000348990 IGKV2-30P06310 120 aa10.43□□□□□ -0.74
APP-202ENST00000348990 NUPR2A6NF83 97 aa10.42□□□□□ -0.74
APP-202ENST00000348990 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
APP-202ENST00000348990 SPINK1P00995 79 aa10.38□□□□□ -0.75
APP-202ENST00000348990 IGLV7-43P04211 117 aa10.37□□□□□ -0.75
APP-202ENST00000348990 DMAC1Q96GE9 116 aa10.37□□□□□ -0.75
APP-202ENST00000348990 MIR22HGQ0VDD5 57 aa10.36□□□□□ -0.75
APP-202ENST00000348990 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
APP-202ENST00000348990 H3BS24 57 aa10.34□□□□□ -0.75
APP-202ENST00000348990 UQCR11O14957 56 aa10.33□□□□□ -0.76
APP-202ENST00000348990 DNAH3Q8TD57 4116 aa10.32□□□□□ -0.76
APP-202ENST00000348990 DNAH7Q8WXX0 4024 aa10.32□□□□□ -0.76
APP-202ENST00000348990 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
APP-202ENST00000348990 SSBP3-AS1Q7Z2R9 100 aa10.29□□□□□ -0.76
APP-202ENST00000348990 LINC01554Q52M75 96 aa10.27□□□□□ -0.77
APP-202ENST00000348990 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
APP-202ENST00000348990 MEGF8Q7Z7M0 2845 aa10.25□□□□□ -0.77
APP-202ENST00000348990 PLECQ15149 4684 aaKnown RBP10.24□□□□□ -0.77
APP-202ENST00000348990 SPATA8Q6RVD6 105 aa10.24□□□□□ -0.77
APP-202ENST00000348990 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
APP-202ENST00000348990 PLA2G1BP04054 148 aaKnown RBP10.22□□□□□ -0.77
APP-202ENST00000348990 LY6G6CO95867 125 aa10.2□□□□□ -0.78
APP-202ENST00000348990 Q8N1X5 172 aa10.18□□□□□ -0.78
APP-202ENST00000348990 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
APP-202ENST00000348990 CSAG1Q6PB30 78 aa10.15□□□□□ -0.78
APP-202ENST00000348990 KRTAP13-2Q52LG2 175 aa10.12□□□□□ -0.79
APP-202ENST00000348990 KRTAP10-2P60368 255 aa10.06□□□□□ -0.8
APP-202ENST00000348990 FLG2Q5D862 2391 aaPredicted RBP10.06□□□□□ -0.8
APP-202ENST00000348990 KRTAP16-1A8MUX0 517 aa10.03□□□□□ -0.8
APP-202ENST00000348990 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
APP-202ENST00000348990 TYMSOSQ8TAI1 123 aa10□□□□□ -0.81
APP-202ENST00000348990 HECTD4Q9Y4D8 3996 aa10□□□□□ -0.81
APP-202ENST00000348990 STARD9Q9P2P6 4700 aa9.99□□□□□ -0.81
APP-202ENST00000348990 KMT2AQ03164 3969 aa9.99□□□□□ -0.81
APP-202ENST00000348990 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
APP-202ENST00000348990 KRTAP10-1P60331 282 aa9.92□□□□□ -0.82
APP-202ENST00000348990 VPS13DQ5THJ4 4388 aa9.9□□□□□ -0.82
APP-202ENST00000348990 C9orf92A6NGG3 77 aa9.9□□□□□ -0.82
APP-202ENST00000348990 DYNC2H1Q8NCM8 4307 aaKnown RBP9.87□□□□□ -0.83
APP-202ENST00000348990 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
APP-202ENST00000348990 KRTAP1-4P0C5Y4 121 aa9.85□□□□□ -0.83
APP-202ENST00000348990 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
APP-202ENST00000348990 Q6ZSA8 131 aa9.84□□□□□ -0.83
APP-202ENST00000348990 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
APP-202ENST00000348990 A0A1B0GU33 70 aa9.83□□□□□ -0.84
APP-202ENST00000348990 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
APP-202ENST00000348990 DNAH6Q9C0G6 4158 aa9.82□□□□□ -0.84
APP-202ENST00000348990 H0YAA0 97 aa9.81□□□□□ -0.84
APP-202ENST00000348990 LINC00304Q8N9R0 145 aa9.8□□□□□ -0.84
APP-202ENST00000348990 PRKDCP78527 4128 aaKnown RBP9.76□□□□□ -0.85
APP-202ENST00000348990 K7ERS5 55 aa9.73□□□□□ -0.85
APP-202ENST00000348990 LRP1BQ9NZR2 4599 aa9.73□□□□□ -0.85
APP-202ENST00000348990 A8MUU9 505 aa9.72□□□□□ -0.85
APP-202ENST00000348990 SMR3BP02814 79 aaPredicted RBP9.71□□□□□ -0.85
APP-202ENST00000348990 KRTAP25-1Q3LHN0 102 aa9.69□□□□□ -0.86
APP-202ENST00000348990 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
APP-202ENST00000348990 DNAH5Q8TE73 4624 aa9.62□□□□□ -0.87
APP-202ENST00000348990 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
APP-202ENST00000348990 ROMO1P60602 79 aa9.58□□□□□ -0.88
APP-202ENST00000348990 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
APP-202ENST00000348990 A0A0D9SG42 100 aa9.56□□□□□ -0.88
APP-202ENST00000348990 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
APP-202ENST00000348990 C20orf166-AS1Q96NR2 134 aa9.49□□□□□ -0.89
APP-202ENST00000348990 RPS29P62273 56 aaKnown RBP9.43□□□□□ -0.9
APP-202ENST00000348990 SPINT4Q6UDR6 99 aa9.41□□□□□ -0.9
APP-202ENST00000348990 RPL37P61927 97 aaKnown RBP9.37□□□□□ -0.91
APP-202ENST00000348990 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
APP-202ENST00000348990 FAT2Q9NYQ8 4349 aa9.33□□□□□ -0.92
APP-202ENST00000348990 PKD1P98161 4303 aa9.28□□□□□ -0.92
APP-202ENST00000348990 DNHD1Q96M86 4753 aa9.28□□□□□ -0.92
APP-202ENST00000348990 C10orf95Q9H7T3 257 aa9.27□□□□□ -0.93
APP-202ENST00000348990 FAT1Q14517 4588 aa9.25□□□□□ -0.93
APP-202ENST00000348990 P0C880 135 aa9.24□□□□□ -0.93
APP-202ENST00000348990 KRTAP13-4Q3LI77 160 aa9.24□□□□□ -0.93
APP-202ENST00000348990 PKHD1P08F94 4074 aa9.23□□□□□ -0.93
APP-202ENST00000348990 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
APP-202ENST00000348990 S4R3F8 94 aa9.19□□□□□ -0.94
APP-202ENST00000348990 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms