RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OTOGQ6ZRI0 2925 aa2.2□□□□□ -2.06
SYNE2-202ENST00000344113 HRNRQ86YZ3 2850 aaPredicted RBP2.2□□□□□ -2.06
SYNE2-202ENST00000344113 COL7A1Q02388 2944 aa2.19□□□□□ -2.06
SYNE2-202ENST00000344113 TNP1P09430 55 aa2.19□□□□□ -2.06
SYNE2-202ENST00000344113 ZFHX3Q15911 3703 aa2.18□□□□□ -2.06
SYNE2-202ENST00000344113 Q6ZSA8 131 aa2.18□□□□□ -2.06
SYNE2-202ENST00000344113 UTRNP46939 3433 aa2.18□□□□□ -2.06
SYNE2-202ENST00000344113 TENM1Q9UKZ4 2725 aa2.18□□□□□ -2.06
SYNE2-202ENST00000344113 SPEGQ15772 3267 aa2.17□□□□□ -2.06
SYNE2-202ENST00000344113 K7EIL1 84 aa2.17□□□□□ -2.06
SYNE2-202ENST00000344113 FLNCQ14315 2725 aa2.16□□□□□ -2.06
SYNE2-202ENST00000344113 TGP01266 2768 aa2.16□□□□□ -2.06
SYNE2-202ENST00000344113 PRO2289Q9P1D8 64 aa2.15□□□□□ -2.06
SYNE2-202ENST00000344113 A0A087WTM6 91 aa2.15□□□□□ -2.06
SYNE2-202ENST00000344113 ZANQ9Y493 2812 aa2.15□□□□□ -2.06
SYNE2-202ENST00000344113 XIRP2A4UGR9 3374 aa2.15□□□□□ -2.06
SYNE2-202ENST00000344113 C9orf92A6NGG3 77 aa2.15□□□□□ -2.07
SYNE2-202ENST00000344113 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
SYNE2-202ENST00000344113 MEGF8Q7Z7M0 2845 aa2.14□□□□□ -2.07
SYNE2-202ENST00000344113 LAMA3Q16787 3333 aa2.14□□□□□ -2.07
SYNE2-202ENST00000344113 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
SYNE2-202ENST00000344113 C10orf95Q9H7T3 257 aa2.12□□□□□ -2.07
SYNE2-202ENST00000344113 TENM2Q9NT68 2774 aa2.12□□□□□ -2.07
SYNE2-202ENST00000344113 EYSQ5T1H1 3165 aa2.11□□□□□ -2.07
SYNE2-202ENST00000344113 H0YAA0 97 aa2.1□□□□□ -2.07
SYNE2-202ENST00000344113 WWC2-AS2Q96NR7 200 aa2.1□□□□□ -2.07
SYNE2-202ENST00000344113 Q5VSD8 79 aa2.09□□□□□ -2.07
SYNE2-202ENST00000344113 CDH23Q9H251 3354 aa2.09□□□□□ -2.07
SYNE2-202ENST00000344113 LOC400499M0QZD8 3231 aa2.09□□□□□ -2.07
SYNE2-202ENST00000344113 DCHS1Q96JQ0 3298 aa2.09□□□□□ -2.08
SYNE2-202ENST00000344113 KRTAP13-1Q8IUC0 172 aa2.08□□□□□ -2.08
SYNE2-202ENST00000344113 VWFP04275 2813 aa2.08□□□□□ -2.08
SYNE2-202ENST00000344113 Q6ZRN7 208 aaPredicted RBP2.05□□□□□ -2.08
SYNE2-202ENST00000344113 PKD1L1Q8TDX9 2849 aa2.05□□□□□ -2.08
SYNE2-202ENST00000344113 SZT2Q5T011 3432 aa2.04□□□□□ -2.08
SYNE2-202ENST00000344113 MXRA5Q9NR99 2828 aa2.04□□□□□ -2.08
SYNE2-202ENST00000344113 FBN2P35556 2912 aa2.03□□□□□ -2.08
SYNE2-202ENST00000344113 XP32Q5T750 250 aa2.02□□□□□ -2.09
SYNE2-202ENST00000344113 AKAP9Q99996 3911 aa2.02□□□□□ -2.09
SYNE2-202ENST00000344113 VCANP13611 3396 aa2.02□□□□□ -2.09
SYNE2-202ENST00000344113 KRTAP12-2P59991 146 aa2.01□□□□□ -2.09
SYNE2-202ENST00000344113 TENM4Q6N022 2769 aa1.99□□□□□ -2.09
SYNE2-202ENST00000344113 TPRXLQ17RH7 258 aa1.99□□□□□ -2.09
SYNE2-202ENST00000344113 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
SYNE2-202ENST00000344113 SMR3AQ99954 134 aa1.97□□□□□ -2.09
SYNE2-202ENST00000344113 ALMS1Q8TCU4 4167 aa1.95□□□□□ -2.1
SYNE2-202ENST00000344113 KRTAP7-1Q8IUC3 87 aa1.94□□□□□ -2.1
SYNE2-202ENST00000344113 M0R2T5 61 aa1.94□□□□□ -2.1
SYNE2-202ENST00000344113 KRTAP13-2Q52LG2 175 aa1.93□□□□□ -2.1
SYNE2-202ENST00000344113 KRTAP10-9P60411 292 aa1.92□□□□□ -2.1
SYNE2-202ENST00000344113 KRTAP10-8P60410 259 aa1.92□□□□□ -2.1
SYNE2-202ENST00000344113 KRTAP19-4Q3LI73 84 aa1.92□□□□□ -2.1
SYNE2-202ENST00000344113 KRTAP10-11P60412 298 aa1.91□□□□□ -2.1
SYNE2-202ENST00000344113 FBN3Q75N90 2809 aa1.91□□□□□ -2.1
SYNE2-202ENST00000344113 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.11
SYNE2-202ENST00000344113 FBN1P35555 2871 aaKnown RBP1.9□□□□□ -2.11
SYNE2-202ENST00000344113 MT3P25713 68 aa1.89□□□□□ -2.11
SYNE2-202ENST00000344113 NBPF19A0A087WUL8 3843 aa1.89□□□□□ -2.11
SYNE2-202ENST00000344113 FLGP20930 4061 aaPredicted RBP1.88□□□□□ -2.11
SYNE2-202ENST00000344113 DNAH14Q0VDD8 3507 aa1.88□□□□□ -2.11
SYNE2-202ENST00000344113 KRTAP10-6P60371 365 aaPredicted RBP1.86□□□□□ -2.11
SYNE2-202ENST00000344113 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
SYNE2-202ENST00000344113 SPRR5A0A1B0GTR4 108 aa1.84□□□□□ -2.11
SYNE2-202ENST00000344113 BRCA2P51587 3418 aa1.84□□□□□ -2.12
SYNE2-202ENST00000344113 DNAH1Q9P2D7 4330 aa1.84□□□□□ -2.12
SYNE2-202ENST00000344113 ZNF469Q96JG9 3925 aaPredicted RBP1.83□□□□□ -2.12
SYNE2-202ENST00000344113 USP34Q70CQ2 3546 aa1.83□□□□□ -2.12
SYNE2-202ENST00000344113 KRTAP10-3P60369 221 aa1.82□□□□□ -2.12
SYNE2-202ENST00000344113 DNAH3Q8TD57 4116 aa1.82□□□□□ -2.12
SYNE2-202ENST00000344113 KRTAP1-5Q9BYS1 174 aa1.81□□□□□ -2.12
SYNE2-202ENST00000344113 KRTAP3-2Q9BYR7 98 aa1.81□□□□□ -2.12
SYNE2-202ENST00000344113 ZFHX4Q86UP3 3567 aa1.81□□□□□ -2.12
SYNE2-202ENST00000344113 SMR3BP02814 79 aaPredicted RBP1.8□□□□□ -2.12
SYNE2-202ENST00000344113 KRTAP10-1P60331 282 aa1.79□□□□□ -2.12
SYNE2-202ENST00000344113 HUWE1Q7Z6Z7 4374 aaKnown RBP1.79□□□□□ -2.12
SYNE2-202ENST00000344113 MYO15AQ9UKN7 3530 aa1.79□□□□□ -2.12
SYNE2-202ENST00000344113 KRTAP1-3Q8IUG1 177 aa1.79□□□□□ -2.12
SYNE2-202ENST00000344113 TRRAPQ9Y4A5 3859 aa1.77□□□□□ -2.13
SYNE2-202ENST00000344113 CMYA5Q8N3K9 4069 aa1.77□□□□□ -2.13
SYNE2-202ENST00000344113 KRTAP3-1Q9BYR8 98 aa1.77□□□□□ -2.13
SYNE2-202ENST00000344113 ANK2Q01484 3957 aa1.76□□□□□ -2.13
SYNE2-202ENST00000344113 WDFY3Q8IZQ1 3526 aa1.76□□□□□ -2.13
SYNE2-202ENST00000344113 KRTAP1-1Q07627 177 aa1.75□□□□□ -2.13
SYNE2-202ENST00000344113 KMT2AQ03164 3969 aa1.75□□□□□ -2.13
SYNE2-202ENST00000344113 DNAH7Q8WXX0 4024 aa1.75□□□□□ -2.13
SYNE2-202ENST00000344113 DNAH6Q9C0G6 4158 aa1.75□□□□□ -2.13
SYNE2-202ENST00000344113 KRTAP1-4P0C5Y4 121 aa1.74□□□□□ -2.13
SYNE2-202ENST00000344113 KRTAP10-2P60368 255 aa1.73□□□□□ -2.13
SYNE2-202ENST00000344113 DMDP11532 3685 aa1.73□□□□□ -2.13
SYNE2-202ENST00000344113 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
SYNE2-202ENST00000344113 RELNP78509 3460 aa1.73□□□□□ -2.13
SYNE2-202ENST00000344113 VPS13BQ7Z7G8 4022 aa1.72□□□□□ -2.13
SYNE2-202ENST00000344113 CSMD1Q96PZ7 3565 aa1.71□□□□□ -2.13
SYNE2-202ENST00000344113 SPTBN5Q9NRC6 3674 aaKnown RBP1.71□□□□□ -2.14
SYNE2-202ENST00000344113 CUBNO60494 3623 aa1.71□□□□□ -2.14
SYNE2-202ENST00000344113 ASPMQ8IZT6 3477 aa1.71□□□□□ -2.14
SYNE2-202ENST00000344113 MUC3AQ02505 3323 aa1.7□□□□□ -2.14
SYNE2-202ENST00000344113 KRTAP3-3Q9BYR6 98 aa1.7□□□□□ -2.14
SYNE2-202ENST00000344113 A0A1B0GVY2 172 aa1.7□□□□□ -2.14
SYNE2-202ENST00000344113 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms