RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
PPFIA3-201ENST00000334186 KRTAP4-16G5E9R7 235 aaPredicted RBP9.94□□□□□ -0.82
PPFIA3-201ENST00000334186 Q5W150 140 aa9.94□□□□□ -0.82
PPFIA3-201ENST00000334186 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
PPFIA3-201ENST00000334186 CSMD1Q96PZ7 3565 aa9.89□□□□□ -0.83
PPFIA3-201ENST00000334186 LCE6AA0A183 80 aa9.88□□□□□ -0.83
PPFIA3-201ENST00000334186 Q6ZR54 194 aa9.87□□□□□ -0.83
PPFIA3-201ENST00000334186 SVEP1Q4LDE5 3571 aa9.85□□□□□ -0.83
PPFIA3-201ENST00000334186 A6NN06 94 aa9.84□□□□□ -0.83
PPFIA3-201ENST00000334186 DMAC1Q96GE9 116 aa9.84□□□□□ -0.83
PPFIA3-201ENST00000334186 PDZD2O15018 2839 aa9.83□□□□□ -0.84
PPFIA3-201ENST00000334186 TENM1Q9UKZ4 2725 aa9.83□□□□□ -0.84
PPFIA3-201ENST00000334186 OTOGQ6ZRI0 2925 aa9.82□□□□□ -0.84
PPFIA3-201ENST00000334186 A8MU10 97 aa9.82□□□□□ -0.84
PPFIA3-201ENST00000334186 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
PPFIA3-201ENST00000334186 PANO1I0J062 215 aa9.8□□□□□ -0.84
PPFIA3-201ENST00000334186 LINC00483Q53H64 154 aa9.79□□□□□ -0.84
PPFIA3-201ENST00000334186 SPENQ96T58 3664 aaKnown RBP9.79□□□□□ -0.84
PPFIA3-201ENST00000334186 NBPF19A0A087WUL8 3843 aa9.78□□□□□ -0.84
PPFIA3-201ENST00000334186 Q6ZSA8 131 aa9.75□□□□□ -0.85
PPFIA3-201ENST00000334186 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
PPFIA3-201ENST00000334186 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
PPFIA3-201ENST00000334186 LUZP6Q538Z0 58 aa9.74□□□□□ -0.85
PPFIA3-201ENST00000334186 SPATA8Q6RVD6 105 aa9.72□□□□□ -0.85
PPFIA3-201ENST00000334186 FBN1P35555 2871 aaKnown RBP9.71□□□□□ -0.85
PPFIA3-201ENST00000334186 ZFHX3Q15911 3703 aa9.7□□□□□ -0.86
PPFIA3-201ENST00000334186 TENM3Q9P273 2699 aa9.7□□□□□ -0.86
PPFIA3-201ENST00000334186 CSMD2Q7Z408 3487 aa9.69□□□□□ -0.86
PPFIA3-201ENST00000334186 VWFP04275 2813 aa9.69□□□□□ -0.86
PPFIA3-201ENST00000334186 CUBNO60494 3623 aa9.67□□□□□ -0.86
PPFIA3-201ENST00000334186 A0A087X002 238 aa9.65□□□□□ -0.87
PPFIA3-201ENST00000334186 NOTCH2NLQ7Z3S9 236 aa9.65□□□□□ -0.87
PPFIA3-201ENST00000334186 KRTAP7-1Q8IUC3 87 aa9.64□□□□□ -0.87
PPFIA3-201ENST00000334186 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
PPFIA3-201ENST00000334186 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
PPFIA3-201ENST00000334186 BSNQ9UPA5 3926 aa9.62□□□□□ -0.87
PPFIA3-201ENST00000334186 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
PPFIA3-201ENST00000334186 ROMO1P60602 79 aa9.59□□□□□ -0.87
PPFIA3-201ENST00000334186 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
PPFIA3-201ENST00000334186 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
PPFIA3-201ENST00000334186 S4R3F8 94 aa9.54□□□□□ -0.88
PPFIA3-201ENST00000334186 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
PPFIA3-201ENST00000334186 Q5VSD8 79 aa9.51□□□□□ -0.89
PPFIA3-201ENST00000334186 KRTAP25-1Q3LHN0 102 aa9.47□□□□□ -0.89
PPFIA3-201ENST00000334186 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.89
PPFIA3-201ENST00000334186 CAMK2N1Q7Z7J9 78 aa9.46□□□□□ -0.9
PPFIA3-201ENST00000334186 A0A0A0MQY5 61 aa9.44□□□□□ -0.9
PPFIA3-201ENST00000334186 SEC61BP60468 96 aaKnown RBP9.37□□□□□ -0.91
PPFIA3-201ENST00000334186 TENM2Q9NT68 2774 aa9.37□□□□□ -0.91
PPFIA3-201ENST00000334186 R4GN34 69 aa9.35□□□□□ -0.91
PPFIA3-201ENST00000334186 KRTAP13-2Q52LG2 175 aa9.34□□□□□ -0.91
PPFIA3-201ENST00000334186 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
PPFIA3-201ENST00000334186 TGP01266 2768 aa9.31□□□□□ -0.92
PPFIA3-201ENST00000334186 M0R2T5 61 aa9.3□□□□□ -0.92
PPFIA3-201ENST00000334186 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
PPFIA3-201ENST00000334186 KRTAP21-3Q3LHN1 58 aa9.27□□□□□ -0.93
PPFIA3-201ENST00000334186 TRRAPQ9Y4A5 3859 aa9.22□□□□□ -0.93
PPFIA3-201ENST00000334186 NDUFAF8A1L188 74 aa9.22□□□□□ -0.93
PPFIA3-201ENST00000334186 ANK3Q12955 4377 aaKnown RBP9.19□□□□□ -0.94
PPFIA3-201ENST00000334186 M0QZ58 72 aa9.18□□□□□ -0.94
PPFIA3-201ENST00000334186 A8MUU9 505 aa9.15□□□□□ -0.95
PPFIA3-201ENST00000334186 VPS13CQ709C8 3753 aa9.12□□□□□ -0.95
PPFIA3-201ENST00000334186 ZNF469Q96JG9 3925 aaPredicted RBP8.98□□□□□ -0.97
PPFIA3-201ENST00000334186 C20orf166-AS1Q96NR2 134 aa8.96□□□□□ -0.97
PPFIA3-201ENST00000334186 KRTAP1-4P0C5Y4 121 aa8.96□□□□□ -0.97
PPFIA3-201ENST00000334186 H0YAA0 97 aa8.94□□□□□ -0.98
PPFIA3-201ENST00000334186 SRRM2Q9UQ35 2752 aaKnown RBP8.89□□□□□ -0.99
PPFIA3-201ENST00000334186 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
PPFIA3-201ENST00000334186 PLAC4Q8WY50 150 aa8.83□□□□□ -1
PPFIA3-201ENST00000334186 FBN3Q75N90 2809 aa8.81□□□□□ -1
PPFIA3-201ENST00000334186 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
PPFIA3-201ENST00000334186 XP32Q5T750 250 aa8.71□□□□□ -1.02
PPFIA3-201ENST00000334186 COL7A1Q02388 2944 aa8.69□□□□□ -1.02
PPFIA3-201ENST00000334186 MEGF8Q7Z7M0 2845 aa8.67□□□□□ -1.02
PPFIA3-201ENST00000334186 P0C880 135 aa8.65□□□□□ -1.03
PPFIA3-201ENST00000334186 AKAP9Q99996 3911 aa8.64□□□□□ -1.03
PPFIA3-201ENST00000334186 TNP1P09430 55 aa8.53□□□□□ -1.04
PPFIA3-201ENST00000334186 TPRXLQ17RH7 258 aa8.51□□□□□ -1.05
PPFIA3-201ENST00000334186 PP632Q6XCG6 107 aa8.51□□□□□ -1.05
PPFIA3-201ENST00000334186 A0A1B0GVY2 172 aa8.51□□□□□ -1.05
PPFIA3-201ENST00000334186 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
PPFIA3-201ENST00000334186 HUWE1Q7Z6Z7 4374 aaKnown RBP8.42□□□□□ -1.06
PPFIA3-201ENST00000334186 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
PPFIA3-201ENST00000334186 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
PPFIA3-201ENST00000334186 DNHD1Q96M86 4753 aa8.23□□□□□ -1.09
PPFIA3-201ENST00000334186 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
PPFIA3-201ENST00000334186 DNAH9Q9NYC9 4486 aa8.2□□□□□ -1.1
PPFIA3-201ENST00000334186 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
PPFIA3-201ENST00000334186 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
PPFIA3-201ENST00000334186 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
PPFIA3-201ENST00000334186 KRTAP13-4Q3LI77 160 aa8.04□□□□□ -1.12
PPFIA3-201ENST00000334186 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
PPFIA3-201ENST00000334186 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.15
PPFIA3-201ENST00000334186 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
PPFIA3-201ENST00000334186 PRO2289Q9P1D8 64 aa7.89□□□□□ -1.15
PPFIA3-201ENST00000334186 PRKDCP78527 4128 aaKnown RBP7.88□□□□□ -1.15
PPFIA3-201ENST00000334186 DNAH10Q8IVF4 4471 aa7.87□□□□□ -1.15
PPFIA3-201ENST00000334186 STARD9Q9P2P6 4700 aa7.87□□□□□ -1.15
PPFIA3-201ENST00000334186 DNAH1Q9P2D7 4330 aa7.86□□□□□ -1.15
PPFIA3-201ENST00000334186 DNAH5Q8TE73 4624 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms