RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
PPFIA3-201ENST00000334186 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
PPFIA3-201ENST00000334186 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-201ENST00000334186 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
PPFIA3-201ENST00000334186 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.78
PPFIA3-201ENST00000334186 PCGF6Q9BYE7 350 aa25.96■■□□□ 1.75
PPFIA3-201ENST00000334186 PELP1Q8IZL8 1130 aaKnown RBP25.92■■□□□ 1.74
PPFIA3-201ENST00000334186 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
PPFIA3-201ENST00000334186 APLP2Q06481 763 aa25.61■■□□□ 1.69
PPFIA3-201ENST00000334186 MYT1Q01538 1121 aa25.46■■□□□ 1.67
PPFIA3-201ENST00000334186 CENPBP07199 599 aaPredicted RBP25.42■■□□□ 1.66
PPFIA3-201ENST00000334186 ZEB1P37275 1124 aaPredicted RBP25.4■■□□□ 1.66
PPFIA3-201ENST00000334186 TRIM41Q8WV44 630 aa25.39■■□□□ 1.65
PPFIA3-201ENST00000334186 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
PPFIA3-201ENST00000334186 HRCP23327 699 aa25.24■■□□□ 1.63
PPFIA3-201ENST00000334186 ABCC9O60706 1549 aa25.06■■□□□ 1.6
PPFIA3-201ENST00000334186 CCER1Q8TC90 406 aaPredicted RBP24.99■■□□□ 1.59
PPFIA3-201ENST00000334186 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
PPFIA3-201ENST00000334186 UBTFP17480 764 aaKnown RBP24.92■■□□□ 1.58
PPFIA3-201ENST00000334186 ERICH6Q7L0X2 663 aa24.77■■□□□ 1.56
PPFIA3-201ENST00000334186 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
PPFIA3-201ENST00000334186 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
PPFIA3-201ENST00000334186 YTHDC1Q96MU7 727 aaKnown RBP24.72■■□□□ 1.55
PPFIA3-201ENST00000334186 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.55
PPFIA3-201ENST00000334186 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
PPFIA3-201ENST00000334186 PABPN1Q86U42 306 aaKnown RBP eCLIP24.58■■□□□ 1.535e-6■■■■□ 22.2
PPFIA3-201ENST00000334186 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
PPFIA3-201ENST00000334186 NEFLP07196 543 aa24.4■■□□□ 1.5
PPFIA3-201ENST00000334186 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.49
PPFIA3-201ENST00000334186 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
PPFIA3-201ENST00000334186 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
PPFIA3-201ENST00000334186 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
PPFIA3-201ENST00000334186 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
PPFIA3-201ENST00000334186 ITGAEP38570 1179 aa24.04■■□□□ 1.44
PPFIA3-201ENST00000334186 GTF3C3Q9Y5Q9 886 aa24■■□□□ 1.43
PPFIA3-201ENST00000334186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
PPFIA3-201ENST00000334186 ACIN1Q9UKV3 1341 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-201ENST00000334186 POLR3GLQ9BT43 218 aa23.58■■□□□ 1.37
PPFIA3-201ENST00000334186 RB1CC1Q8TDY2 1594 aa23.51■■□□□ 1.35
PPFIA3-201ENST00000334186 FAM50AQ14320 339 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-201ENST00000334186 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
PPFIA3-201ENST00000334186 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
PPFIA3-201ENST00000334186 NACADO15069 1562 aa23.43■■□□□ 1.34
PPFIA3-201ENST00000334186 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
PPFIA3-201ENST00000334186 ZNF316A6NFI3 1004 aaPredicted RBP23.41■■□□□ 1.34
PPFIA3-201ENST00000334186 CSRNP3Q8WYN3 585 aa23.4■■□□□ 1.34
PPFIA3-201ENST00000334186 BCANQ96GW7 911 aa23.4■■□□□ 1.34
PPFIA3-201ENST00000334186 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.34
PPFIA3-201ENST00000334186 CNGB1Q14028 1251 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-201ENST00000334186 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
PPFIA3-201ENST00000334186 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
PPFIA3-201ENST00000334186 NEUROD1Q13562 356 aa23.28■■□□□ 1.32
PPFIA3-201ENST00000334186 TRIM52Q96A61 297 aa23.27■■□□□ 1.32
PPFIA3-201ENST00000334186 CECR2Q9BXF3 1484 aa23.16■■□□□ 1.3
PPFIA3-201ENST00000334186 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.29
PPFIA3-201ENST00000334186 ANP32CO43423 234 aa23.05■■□□□ 1.28
PPFIA3-201ENST00000334186 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
PPFIA3-201ENST00000334186 CLSPNQ9HAW4 1339 aa23.04■■□□□ 1.28
PPFIA3-201ENST00000334186 FBLN2P98095 1184 aa23.02■■□□□ 1.28
PPFIA3-201ENST00000334186 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
PPFIA3-201ENST00000334186 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-201ENST00000334186 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
PPFIA3-201ENST00000334186 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
PPFIA3-201ENST00000334186 FKBP8Q14318 412 aa22.85■■□□□ 1.25
PPFIA3-201ENST00000334186 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
PPFIA3-201ENST00000334186 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
PPFIA3-201ENST00000334186 ARID3CA6NKF2 412 aa22.83■■□□□ 1.25
PPFIA3-201ENST00000334186 ANP32AP39687 249 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-201ENST00000334186 MIER1Q8N108 512 aa22.71■■□□□ 1.23
PPFIA3-201ENST00000334186 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
PPFIA3-201ENST00000334186 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
PPFIA3-201ENST00000334186 TONSLQ96HA7 1378 aa22.65■■□□□ 1.22
PPFIA3-201ENST00000334186 CLIP1P30622 1438 aa22.62■■□□□ 1.21
PPFIA3-201ENST00000334186 EIF5BO60841 1220 aaKnown RBP22.61■■□□□ 1.21
PPFIA3-201ENST00000334186 ANP32EQ9BTT0 268 aa22.59■■□□□ 1.21
PPFIA3-201ENST00000334186 EEA1Q15075 1411 aa22.59■■□□□ 1.21
PPFIA3-201ENST00000334186 DDX10Q13206 875 aaKnown RBP22.53■■□□□ 1.2
PPFIA3-201ENST00000334186 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
PPFIA3-201ENST00000334186 CEP162Q5TB80 1403 aa22.52■■□□□ 1.2
PPFIA3-201ENST00000334186 WIZO95785 1651 aa22.5■■□□□ 1.19
PPFIA3-201ENST00000334186 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
PPFIA3-201ENST00000334186 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
PPFIA3-201ENST00000334186 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.19
PPFIA3-201ENST00000334186 NBR1Q14596 966 aa22.45■■□□□ 1.18
PPFIA3-201ENST00000334186 CHIC2Q9UKJ5 165 aa22.43■■□□□ 1.18
PPFIA3-201ENST00000334186 MTUS2Q5JR59 1369 aa22.42■■□□□ 1.18
PPFIA3-201ENST00000334186 SOGA1O94964 1423 aa22.38■■□□□ 1.17
PPFIA3-201ENST00000334186 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
PPFIA3-201ENST00000334186 CANXP27824 592 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-201ENST00000334186 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
PPFIA3-201ENST00000334186 ZBTB47Q9UFB7 747 aaPredicted RBP22.34■■□□□ 1.17
PPFIA3-201ENST00000334186 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
PPFIA3-201ENST00000334186 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
PPFIA3-201ENST00000334186 SMARCA2P51531 1590 aa22.32■■□□□ 1.16
PPFIA3-201ENST00000334186 FAM9BQ8IZU0 186 aa22.31■■□□□ 1.16
PPFIA3-201ENST00000334186 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
PPFIA3-201ENST00000334186 NEFMP07197 916 aa22.28■■□□□ 1.16
PPFIA3-201ENST00000334186 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
PPFIA3-201ENST00000334186 BCL11AQ9H165 835 aa22.27■■□□□ 1.16
PPFIA3-201ENST00000334186 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms