RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 DMXL2Q8TDJ6 3036 aa11.5□□□□□ -0.57
HOMER1-202ENST00000334082 CELSR3Q9NYQ7 3312 aa11.5□□□□□ -0.57
HOMER1-202ENST00000334082 ATMQ13315 3056 aa11.48□□□□□ -0.57
HOMER1-202ENST00000334082 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
HOMER1-202ENST00000334082 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
HOMER1-202ENST00000334082 COL12A1Q99715 3063 aa11.43□□□□□ -0.58
HOMER1-202ENST00000334082 XP32Q5T750 250 aa11.43□□□□□ -0.58
HOMER1-202ENST00000334082 KMT2BQ9UMN6 2715 aaPredicted RBP11.42□□□□□ -0.58
HOMER1-202ENST00000334082 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
HOMER1-202ENST00000334082 APCP25054 2843 aa11.41□□□□□ -0.58
HOMER1-202ENST00000334082 TENM4Q6N022 2769 aa11.4□□□□□ -0.59
HOMER1-202ENST00000334082 ASH1LQ9NR48 2969 aaKnown RBP11.38□□□□□ -0.59
HOMER1-202ENST00000334082 FRYLO94915 3013 aa11.36□□□□□ -0.59
HOMER1-202ENST00000334082 KRTAP21-3Q3LHN1 58 aa11.34□□□□□ -0.59
HOMER1-202ENST00000334082 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
HOMER1-202ENST00000334082 LAMA1P25391 3075 aa11.3□□□□□ -0.6
HOMER1-202ENST00000334082 KRTAP1-4P0C5Y4 121 aa11.27□□□□□ -0.61
HOMER1-202ENST00000334082 LRBAP50851 2863 aa11.26□□□□□ -0.61
HOMER1-202ENST00000334082 ADGRG4Q8IZF6 3080 aa11.25□□□□□ -0.61
HOMER1-202ENST00000334082 NIPBLQ6KC79 2804 aaeCLIP11.24□□□□□ -0.61
HOMER1-202ENST00000334082 PRO2289Q9P1D8 64 aa11.23□□□□□ -0.61
HOMER1-202ENST00000334082 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
HOMER1-202ENST00000334082 BOD1L1Q8NFC6 3051 aa11.2□□□□□ -0.62
HOMER1-202ENST00000334082 NBEAQ8NFP9 2946 aa11.19□□□□□ -0.62
HOMER1-202ENST00000334082 VCANP13611 3396 aa11.18□□□□□ -0.62
HOMER1-202ENST00000334082 SZT2Q5T011 3432 aa11.17□□□□□ -0.62
HOMER1-202ENST00000334082 KRTAP10-10P60014 251 aa11.17□□□□□ -0.62
HOMER1-202ENST00000334082 ZZEF1O43149 2961 aa11.11□□□□□ -0.63
HOMER1-202ENST00000334082 KRTAP12-2P59991 146 aa11.08□□□□□ -0.64
HOMER1-202ENST00000334082 COL6A3P12111 3177 aa11.07□□□□□ -0.64
HOMER1-202ENST00000334082 TPRXLQ17RH7 258 aa11.05□□□□□ -0.64
HOMER1-202ENST00000334082 DCHS2Q6V1P9 2916 aa11.05□□□□□ -0.64
HOMER1-202ENST00000334082 CFAP47Q6ZTR5 3102 aa11.04□□□□□ -0.64
HOMER1-202ENST00000334082 DNAH14Q0VDD8 3507 aa11.04□□□□□ -0.64
HOMER1-202ENST00000334082 EYSQ5T1H1 3165 aa10.99□□□□□ -0.65
HOMER1-202ENST00000334082 KRTAP13-4Q3LI77 160 aa10.94□□□□□ -0.66
HOMER1-202ENST00000334082 ZANQ9Y493 2812 aa10.92□□□□□ -0.66
HOMER1-202ENST00000334082 KRTAP13-3Q3SY46 172 aa10.89□□□□□ -0.67
HOMER1-202ENST00000334082 TENM3Q9P273 2699 aa10.86□□□□□ -0.67
HOMER1-202ENST00000334082 TENM1Q9UKZ4 2725 aa10.81□□□□□ -0.68
HOMER1-202ENST00000334082 KRTAP12-1P59990 96 aa10.79□□□□□ -0.68
HOMER1-202ENST00000334082 NF1P21359 2839 aa10.74□□□□□ -0.69
HOMER1-202ENST00000334082 SPEGQ15772 3267 aa10.72□□□□□ -0.69
HOMER1-202ENST00000334082 USP34Q70CQ2 3546 aa10.67□□□□□ -0.7
HOMER1-202ENST00000334082 FBN2P35556 2912 aa10.66□□□□□ -0.7
HOMER1-202ENST00000334082 TENM2Q9NT68 2774 aa10.66□□□□□ -0.7
HOMER1-202ENST00000334082 TNRC18O15417 2968 aaPredicted RBP10.64□□□□□ -0.71
HOMER1-202ENST00000334082 HRNRQ86YZ3 2850 aaPredicted RBP10.63□□□□□ -0.71
HOMER1-202ENST00000334082 KRTAP15-1Q3LI76 137 aa10.63□□□□□ -0.71
HOMER1-202ENST00000334082 DMXL1Q9Y485 3027 aa10.61□□□□□ -0.71
HOMER1-202ENST00000334082 INE1O15225 51 aa10.57□□□□□ -0.72
HOMER1-202ENST00000334082 SPTBN5Q9NRC6 3674 aaKnown RBP10.48□□□□□ -0.73
HOMER1-202ENST00000334082 CELSR1Q9NYQ6 3014 aa10.46□□□□□ -0.74
HOMER1-202ENST00000334082 PKD1L1Q8TDX9 2849 aa10.43□□□□□ -0.74
HOMER1-202ENST00000334082 TGP01266 2768 aa10.42□□□□□ -0.74
HOMER1-202ENST00000334082 KRTAP3-1Q9BYR8 98 aa10.4□□□□□ -0.75
HOMER1-202ENST00000334082 LOC400499M0QZD8 3231 aa10.38□□□□□ -0.75
HOMER1-202ENST00000334082 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
HOMER1-202ENST00000334082 MYO15AQ9UKN7 3530 aa10.29□□□□□ -0.76
HOMER1-202ENST00000334082 VWFP04275 2813 aa10.26□□□□□ -0.77
HOMER1-202ENST00000334082 KRTAP10-6P60371 365 aaPredicted RBP10.24□□□□□ -0.77
HOMER1-202ENST00000334082 PDZD2O15018 2839 aa10.21□□□□□ -0.77
HOMER1-202ENST00000334082 DCHS1Q96JQ0 3298 aa10.1□□□□□ -0.79
HOMER1-202ENST00000334082 WDFY3Q8IZQ1 3526 aa10.04□□□□□ -0.8
HOMER1-202ENST00000334082 RELNP78509 3460 aa10.02□□□□□ -0.81
HOMER1-202ENST00000334082 CRCT1Q9UGL9 99 aa9.93□□□□□ -0.82
HOMER1-202ENST00000334082 SRRM2Q9UQ35 2752 aaKnown RBP9.87□□□□□ -0.83
HOMER1-202ENST00000334082 KRTAP10-12P60413 245 aa9.85□□□□□ -0.83
HOMER1-202ENST00000334082 FBN1P35555 2871 aaKnown RBP9.84□□□□□ -0.83
HOMER1-202ENST00000334082 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
HOMER1-202ENST00000334082 NBPF19A0A087WUL8 3843 aa9.76□□□□□ -0.85
HOMER1-202ENST00000334082 ASPMQ8IZT6 3477 aa9.69□□□□□ -0.86
HOMER1-202ENST00000334082 ZFHX4Q86UP3 3567 aa9.68□□□□□ -0.86
HOMER1-202ENST00000334082 OTOGQ6ZRI0 2925 aa9.67□□□□□ -0.86
HOMER1-202ENST00000334082 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
HOMER1-202ENST00000334082 KRTAP12-3P60328 96 aa9.65□□□□□ -0.87
HOMER1-202ENST00000334082 FBN3Q75N90 2809 aa9.64□□□□□ -0.87
HOMER1-202ENST00000334082 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
HOMER1-202ENST00000334082 LAMA5O15230 3695 aa9.58□□□□□ -0.88
HOMER1-202ENST00000334082 KRTAP23-1A1A580 65 aa9.56□□□□□ -0.88
HOMER1-202ENST00000334082 CSMD1Q96PZ7 3565 aa9.55□□□□□ -0.88
HOMER1-202ENST00000334082 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
HOMER1-202ENST00000334082 MEGF8Q7Z7M0 2845 aa9.51□□□□□ -0.89
HOMER1-202ENST00000334082 MT1HL1P0DM35 61 aa9.49□□□□□ -0.89
HOMER1-202ENST00000334082 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
HOMER1-202ENST00000334082 SMG1Q96Q15 3661 aaKnown RBP9.39□□□□□ -0.91
HOMER1-202ENST00000334082 KRTAP10-5P60370 271 aa9.38□□□□□ -0.91
HOMER1-202ENST00000334082 ANK3Q12955 4377 aaKnown RBP9.37□□□□□ -0.91
HOMER1-202ENST00000334082 DMDP11532 3685 aa9.34□□□□□ -0.91
HOMER1-202ENST00000334082 KRTAP4-5Q9BYR2 181 aa9.23□□□□□ -0.93
HOMER1-202ENST00000334082 CSMD2Q7Z408 3487 aa9.18□□□□□ -0.94
HOMER1-202ENST00000334082 KRTAP10-4P60372 401 aaPredicted RBP9.16□□□□□ -0.94
HOMER1-202ENST00000334082 SVEP1Q4LDE5 3571 aa9.16□□□□□ -0.94
HOMER1-202ENST00000334082 TRRAPQ9Y4A5 3859 aa9.15□□□□□ -0.95
HOMER1-202ENST00000334082 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
HOMER1-202ENST00000334082 CUBNO60494 3623 aa9.05□□□□□ -0.96
HOMER1-202ENST00000334082 MUC3AQ02505 3323 aa9□□□□□ -0.97
HOMER1-202ENST00000334082 HUWE1Q7Z6Z7 4374 aaKnown RBP8.9□□□□□ -0.98
HOMER1-202ENST00000334082 SPENQ96T58 3664 aaKnown RBP8.9□□□□□ -0.98
HOMER1-202ENST00000334082 KRTAP8-1Q8IUC2 63 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms