RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 PRPF4O43172 522 aaKnown RBP eCLIP23.08■■□□□ 1.286e-9■□□□□ 9.8
HOMER1-202ENST00000334082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.08■■□□□ 1.63e-7■□□□□ 10.8
HOMER1-202ENST00000334082 DDX3XO00571 662 aaKnown RBP eCLIP22.06■■□□□ 1.123e-7■■■■□ 20.2
HOMER1-202ENST00000334082 YBX3P16989 372 aaKnown RBP eCLIP21.98■■□□□ 1.114e-7■□□□□ 9.7
HOMER1-202ENST00000334082 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.51■■□□□ 1.359e-7■■■■■ 56.9
HOMER1-202ENST00000334082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.61■■□□□ 1.211e-6■■■■□ 19.5
HOMER1-202ENST00000334082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.121e-6■■□□□ 11.7
HOMER1-202ENST00000334082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.4■■□□□ 1.821e-6■■■■■ 126.2
HOMER1-202ENST00000334082 EIF3HO15372 352 aaKnown RBP eCLIP23.23■■□□□ 1.312e-6■■■■□ 20
HOMER1-202ENST00000334082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.29■■□□□ 1.82e-6■■■□□ 17.1
HOMER1-202ENST00000334082 U2AF2P26368 475 aaKnown RBP eCLIP24.86■■□□□ 1.572e-6■■■□□ 17.2
HOMER1-202ENST00000334082 SF3B1O75533 1304 aaKnown RBP eCLIP22.53■■□□□ 1.23e-6■■■■■ 137.9
HOMER1-202ENST00000334082 QKIQ96PU8 341 aaKnown RBP eCLIP22.77■■□□□ 1.244e-6■■■□□ 19.2
HOMER1-202ENST00000334082 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.04■■□□□ 1.765e-6■■■■□ 19.9
HOMER1-202ENST00000334082 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.91■□□□□ 0.947e-6■■■■□ 22
HOMER1-202ENST00000334082 RBM22Q9NW64 420 aaKnown RBP eCLIP22.17■■□□□ 1.147e-6■■■□□ 17.4
Retrieved 16 of 16 RNA–protein pairs in 3.9 ms