RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KMT2AQ03164 3969 aa14.12□□□□□ -0.15
TSKU-201ENST00000333090 HRES1P13985 223 aa14.12□□□□□ -0.15
TSKU-201ENST00000333090 ZNF706Q9Y5V0 76 aaPredicted RBP14.09□□□□□ -0.15
TSKU-201ENST00000333090 CDC42SE1Q9NRR8 79 aa14.08□□□□□ -0.16
TSKU-201ENST00000333090 MEGF8Q7Z7M0 2845 aa14.07□□□□□ -0.16
TSKU-201ENST00000333090 FRAS1Q86XX4 4008 aa14.06□□□□□ -0.16
TSKU-201ENST00000333090 PLAC8Q9NZF1 115 aa14.06□□□□□ -0.16
TSKU-201ENST00000333090 KTN1-AS1Q86SY8 53 aa14.06□□□□□ -0.16
TSKU-201ENST00000333090 PSORS1C2Q9UIG4 136 aa14.06□□□□□ -0.16
TSKU-201ENST00000333090 DNHD1Q96M86 4753 aa14.03□□□□□ -0.16
TSKU-201ENST00000333090 SPINK6Q6UWN8 80 aa14.03□□□□□ -0.16
TSKU-201ENST00000333090 TGP01266 2768 aa14.03□□□□□ -0.16
TSKU-201ENST00000333090 DNAH2Q9P225 4427 aa14.01□□□□□ -0.17
TSKU-201ENST00000333090 IGLV5-52A0A0A0MRZ9 124 aa14□□□□□ -0.17
TSKU-201ENST00000333090 SPINK7P58062 85 aa13.99□□□□□ -0.17
TSKU-201ENST00000333090 VPS13DQ5THJ4 4388 aa13.98□□□□□ -0.17
TSKU-201ENST00000333090 DNAH8Q96JB1 4490 aa13.98□□□□□ -0.17
TSKU-201ENST00000333090 A6NN06 94 aa13.98□□□□□ -0.17
TSKU-201ENST00000333090 Q5W150 140 aa13.98□□□□□ -0.17
TSKU-201ENST00000333090 HECTD4Q9Y4D8 3996 aa13.97□□□□□ -0.17
TSKU-201ENST00000333090 ZNF861PO60384 105 aa13.97□□□□□ -0.17
TSKU-201ENST00000333090 A0A087WTM6 91 aa13.95□□□□□ -0.18
TSKU-201ENST00000333090 PRR26Q8N8Z3 221 aa13.95□□□□□ -0.18
TSKU-201ENST00000333090 RTL8CO15255 209 aa13.92□□□□□ -0.18
TSKU-201ENST00000333090 NUPR2A6NF83 97 aa13.9□□□□□ -0.18
TSKU-201ENST00000333090 FBN3Q75N90 2809 aa13.88□□□□□ -0.19
TSKU-201ENST00000333090 CIRBP-AS1Q8TBR5 109 aa13.87□□□□□ -0.19
TSKU-201ENST00000333090 KRTAP13-3Q3SY46 172 aa13.87□□□□□ -0.19
TSKU-201ENST00000333090 RBM12B-AS1Q9P1G2 102 aa13.85□□□□□ -0.19
TSKU-201ENST00000333090 DNAH17Q9UFH2 4485 aa13.81□□□□□ -0.2
TSKU-201ENST00000333090 ACYP2P14621 99 aa13.8□□□□□ -0.2
TSKU-201ENST00000333090 DNAH6Q9C0G6 4158 aa13.78□□□□□ -0.2
TSKU-201ENST00000333090 C7orf65Q6ZTY9 151 aa13.77□□□□□ -0.21
TSKU-201ENST00000333090 IGLV7-43P04211 117 aa13.75□□□□□ -0.21
TSKU-201ENST00000333090 RETNLBQ9BQ08 111 aa13.73□□□□□ -0.21
TSKU-201ENST00000333090 C8orf87E5RJ46 101 aa13.71□□□□□ -0.21
TSKU-201ENST00000333090 DMAC1Q96GE9 116 aa13.69□□□□□ -0.22
TSKU-201ENST00000333090 ALMS1Q8TCU4 4167 aa13.68□□□□□ -0.22
TSKU-201ENST00000333090 LINC00313P59037 77 aa13.67□□□□□ -0.22
TSKU-201ENST00000333090 SSBP3-AS1Q7Z2R9 100 aa13.64□□□□□ -0.23
TSKU-201ENST00000333090 FAM229AH3BQW9 127 aa13.63□□□□□ -0.23
TSKU-201ENST00000333090 DNAH11Q96DT5 4516 aa13.61□□□□□ -0.23
TSKU-201ENST00000333090 LY6G6CO95867 125 aa13.6□□□□□ -0.23
TSKU-201ENST00000333090 A0A1B0GU69 56 aa13.59□□□□□ -0.23
TSKU-201ENST00000333090 HYDINQ4G0P3 5121 aa13.57□□□□□ -0.24
TSKU-201ENST00000333090 DNAH5Q8TE73 4624 aa13.56□□□□□ -0.24
TSKU-201ENST00000333090 IGKV2-30P06310 120 aa13.56□□□□□ -0.24
TSKU-201ENST00000333090 C1orf134Q5TEV5 83 aa13.53□□□□□ -0.24
TSKU-201ENST00000333090 KRTAP10-2P60368 255 aa13.47□□□□□ -0.25
TSKU-201ENST00000333090 KRTAP13-2Q52LG2 175 aa13.47□□□□□ -0.25
TSKU-201ENST00000333090 PRAC1Q96KF2 57 aa13.47□□□□□ -0.25
TSKU-201ENST00000333090 IGKV2D-30A0A075B6S6 120 aa13.46□□□□□ -0.26
TSKU-201ENST00000333090 LRP1BQ9NZR2 4599 aa13.45□□□□□ -0.26
TSKU-201ENST00000333090 KRTAP16-1A8MUX0 517 aa13.43□□□□□ -0.26
TSKU-201ENST00000333090 SPATA8Q6RVD6 105 aa13.42□□□□□ -0.26
TSKU-201ENST00000333090 ADM2Q7Z4H4 148 aa13.41□□□□□ -0.26
TSKU-201ENST00000333090 MIR22HGQ0VDD5 57 aa13.39□□□□□ -0.27
TSKU-201ENST00000333090 UQCR11O14957 56 aa13.38□□□□□ -0.27
TSKU-201ENST00000333090 PKD1P98161 4303 aa13.34□□□□□ -0.27
TSKU-201ENST00000333090 FAT2Q9NYQ8 4349 aa13.33□□□□□ -0.28
TSKU-201ENST00000333090 PLA2G1BP04054 148 aaKnown RBP13.33□□□□□ -0.28
TSKU-201ENST00000333090 VPS13BQ7Z7G8 4022 aa13.25□□□□□ -0.29
TSKU-201ENST00000333090 KRTAP10-1P60331 282 aa13.24□□□□□ -0.29
TSKU-201ENST00000333090 SPINK1P00995 79 aa13.23□□□□□ -0.29
TSKU-201ENST00000333090 KRTAP1-4P0C5Y4 121 aa13.22□□□□□ -0.29
TSKU-201ENST00000333090 PKHD1P08F94 4074 aa13.21□□□□□ -0.29
TSKU-201ENST00000333090 C4orf48Q5BLP8 95 aa13.19□□□□□ -0.3
TSKU-201ENST00000333090 Q8N1X5 172 aa13.17□□□□□ -0.3
TSKU-201ENST00000333090 Q6ZSA8 131 aa13.14□□□□□ -0.31
TSKU-201ENST00000333090 TYMSOSQ8TAI1 123 aa13.11□□□□□ -0.31
TSKU-201ENST00000333090 LINC01554Q52M75 96 aa13.09□□□□□ -0.31
TSKU-201ENST00000333090 CSAG1Q6PB30 78 aa13□□□□□ -0.33
TSKU-201ENST00000333090 SACSQ9NZJ4 4579 aa13□□□□□ -0.33
TSKU-201ENST00000333090 LINC00304Q8N9R0 145 aa12.9□□□□□ -0.34
TSKU-201ENST00000333090 FAT1Q14517 4588 aa12.9□□□□□ -0.34
TSKU-201ENST00000333090 H0YAA0 97 aa12.86□□□□□ -0.35
TSKU-201ENST00000333090 SMR3BP02814 79 aaPredicted RBP12.86□□□□□ -0.35
TSKU-201ENST00000333090 DYNC1H1Q14204 4646 aaKnown RBP12.85□□□□□ -0.35
TSKU-201ENST00000333090 C9orf92A6NGG3 77 aa12.83□□□□□ -0.35
TSKU-201ENST00000333090 RPS29P62273 56 aaKnown RBP12.77□□□□□ -0.37
TSKU-201ENST00000333090 A8MUU9 505 aa12.75□□□□□ -0.37
TSKU-201ENST00000333090 KRTAP3-1Q9BYR8 98 aa12.75□□□□□ -0.37
TSKU-201ENST00000333090 A0A1B0GU33 70 aa12.75□□□□□ -0.37
TSKU-201ENST00000333090 C20orf166-AS1Q96NR2 134 aa12.7□□□□□ -0.38
TSKU-201ENST00000333090 KMT2CQ8NEZ4 4911 aaKnown RBP12.67□□□□□ -0.38
TSKU-201ENST00000333090 H1FX-AS1Q4G0G2 97 aa12.67□□□□□ -0.38
TSKU-201ENST00000333090 APOBP04114 4563 aaKnown RBP12.65□□□□□ -0.38
TSKU-201ENST00000333090 KRTAP21-3Q3LHN1 58 aa12.6□□□□□ -0.39
TSKU-201ENST00000333090 FLG2Q5D862 2391 aaPredicted RBP12.56□□□□□ -0.4
TSKU-201ENST00000333090 KRTAP25-1Q3LHN0 102 aa12.56□□□□□ -0.4
TSKU-201ENST00000333090 RYR2Q92736 4967 aa12.55□□□□□ -0.4
TSKU-201ENST00000333090 PKHD1L1Q86WI1 4243 aa12.48□□□□□ -0.41
TSKU-201ENST00000333090 COX6B2Q6YFQ2 88 aa12.46□□□□□ -0.41
TSKU-201ENST00000333090 A0A1B0GVY2 172 aa12.44□□□□□ -0.42
TSKU-201ENST00000333090 LRP1Q07954 4544 aaKnown RBP12.44□□□□□ -0.42
TSKU-201ENST00000333090 K7ERS5 55 aa12.43□□□□□ -0.42
TSKU-201ENST00000333090 CRIPTQ9P021 101 aa12.42□□□□□ -0.42
TSKU-201ENST00000333090 KRTAP10-4P60372 401 aaPredicted RBP12.41□□□□□ -0.42
TSKU-201ENST00000333090 H3BS24 57 aa12.4□□□□□ -0.42
TSKU-201ENST00000333090 DMBT1Q9UGM3 2413 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms