RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
SLIT3-201ENST00000332966 S4R3F8 94 aa9.09□□□□□ -0.95
SLIT3-201ENST00000332966 ITPR2Q14571 2701 aa9.09□□□□□ -0.95
SLIT3-201ENST00000332966 DMBT1Q9UGM3 2413 aaPredicted RBP9.08□□□□□ -0.96
SLIT3-201ENST00000332966 CELSR2Q9HCU4 2923 aa9.08□□□□□ -0.96
SLIT3-201ENST00000332966 HIVEP1P15822 2718 aa9.06□□□□□ -0.96
SLIT3-201ENST00000332966 MUC3AQ02505 3323 aa9.06□□□□□ -0.96
SLIT3-201ENST00000332966 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
SLIT3-201ENST00000332966 FBN2P35556 2912 aa9.04□□□□□ -0.96
SLIT3-201ENST00000332966 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
SLIT3-201ENST00000332966 KRTAP10-2P60368 255 aa9.02□□□□□ -0.97
SLIT3-201ENST00000332966 NF1P21359 2839 aa8.99□□□□□ -0.97
SLIT3-201ENST00000332966 KMT2BQ9UMN6 2715 aaPredicted RBP8.96□□□□□ -0.97
SLIT3-201ENST00000332966 Q6ZSA8 131 aa8.94□□□□□ -0.98
SLIT3-201ENST00000332966 DCHS2Q6V1P9 2916 aa8.94□□□□□ -0.98
SLIT3-201ENST00000332966 KRTAP13-2Q52LG2 175 aa8.94□□□□□ -0.98
SLIT3-201ENST00000332966 WDFY3Q8IZQ1 3526 aa8.93□□□□□ -0.98
SLIT3-201ENST00000332966 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
SLIT3-201ENST00000332966 MXRA5Q9NR99 2828 aa8.91□□□□□ -0.98
SLIT3-201ENST00000332966 FLG2Q5D862 2391 aaPredicted RBP8.89□□□□□ -0.99
SLIT3-201ENST00000332966 DCHS1Q96JQ0 3298 aa8.88□□□□□ -0.99
SLIT3-201ENST00000332966 A0A0A0MQY5 61 aa8.88□□□□□ -0.99
SLIT3-201ENST00000332966 CAMK2N1Q7Z7J9 78 aa8.87□□□□□ -0.99
SLIT3-201ENST00000332966 A8MUU9 505 aa8.83□□□□□ -1
SLIT3-201ENST00000332966 R4GN34 69 aa8.83□□□□□ -1
SLIT3-201ENST00000332966 KRTAP16-1A8MUX0 517 aa8.82□□□□□ -1
SLIT3-201ENST00000332966 ZFHX4Q86UP3 3567 aa8.76□□□□□ -1.01
SLIT3-201ENST00000332966 CRYBG3Q68DQ2 2970 aa8.75□□□□□ -1.01
SLIT3-201ENST00000332966 NDUFAF8A1L188 74 aa8.75□□□□□ -1.01
SLIT3-201ENST00000332966 J3QL48 77 aa8.73□□□□□ -1.01
SLIT3-201ENST00000332966 M0QZ58 72 aa8.72□□□□□ -1.01
SLIT3-201ENST00000332966 H0YAA0 97 aa8.71□□□□□ -1.01
SLIT3-201ENST00000332966 KRTAP13-3Q3SY46 172 aa8.7□□□□□ -1.02
SLIT3-201ENST00000332966 CSMD1Q96PZ7 3565 aa8.7□□□□□ -1.02
SLIT3-201ENST00000332966 RELNP78509 3460 aa8.69□□□□□ -1.02
SLIT3-201ENST00000332966 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
SLIT3-201ENST00000332966 SMG1Q96Q15 3661 aaKnown RBP8.62□□□□□ -1.03
SLIT3-201ENST00000332966 ASPMQ8IZT6 3477 aa8.6□□□□□ -1.03
SLIT3-201ENST00000332966 TENM3Q9P273 2699 aa8.6□□□□□ -1.03
SLIT3-201ENST00000332966 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
SLIT3-201ENST00000332966 CELSR1Q9NYQ6 3014 aa8.57□□□□□ -1.04
SLIT3-201ENST00000332966 Q5VSD8 79 aa8.53□□□□□ -1.04
SLIT3-201ENST00000332966 LAMA5O15230 3695 aa8.52□□□□□ -1.05
SLIT3-201ENST00000332966 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
SLIT3-201ENST00000332966 TGP01266 2768 aa8.48□□□□□ -1.05
SLIT3-201ENST00000332966 DMDP11532 3685 aa8.47□□□□□ -1.05
SLIT3-201ENST00000332966 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.05
SLIT3-201ENST00000332966 PDZD2O15018 2839 aa8.4□□□□□ -1.06
SLIT3-201ENST00000332966 SVEP1Q4LDE5 3571 aa8.35□□□□□ -1.07
SLIT3-201ENST00000332966 TENM4Q6N022 2769 aa8.35□□□□□ -1.07
SLIT3-201ENST00000332966 TENM1Q9UKZ4 2725 aa8.34□□□□□ -1.07
SLIT3-201ENST00000332966 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
SLIT3-201ENST00000332966 P0C880 135 aa8.32□□□□□ -1.08
SLIT3-201ENST00000332966 VWFP04275 2813 aa8.32□□□□□ -1.08
SLIT3-201ENST00000332966 M0R2T5 61 aa8.23□□□□□ -1.09
SLIT3-201ENST00000332966 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
SLIT3-201ENST00000332966 XP32Q5T750 250 aa8.2□□□□□ -1.1
SLIT3-201ENST00000332966 SPENQ96T58 3664 aaKnown RBP8.17□□□□□ -1.1
SLIT3-201ENST00000332966 PKD1L1Q8TDX9 2849 aa8.13□□□□□ -1.11
SLIT3-201ENST00000332966 TNP1P09430 55 aa8.13□□□□□ -1.11
SLIT3-201ENST00000332966 CUBNO60494 3623 aa8.1□□□□□ -1.11
SLIT3-201ENST00000332966 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.11
SLIT3-201ENST00000332966 TPRXLQ17RH7 258 aa8.08□□□□□ -1.12
SLIT3-201ENST00000332966 FBN1P35555 2871 aaKnown RBP8.04□□□□□ -1.12
SLIT3-201ENST00000332966 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
SLIT3-201ENST00000332966 KRTAP12-2P59991 146 aa8.02□□□□□ -1.12
SLIT3-201ENST00000332966 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
SLIT3-201ENST00000332966 BSNQ9UPA5 3926 aa7.98□□□□□ -1.13
SLIT3-201ENST00000332966 TENM2Q9NT68 2774 aa7.95□□□□□ -1.14
SLIT3-201ENST00000332966 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
SLIT3-201ENST00000332966 OTOGQ6ZRI0 2925 aa7.93□□□□□ -1.14
SLIT3-201ENST00000332966 ANK3Q12955 4377 aaKnown RBP7.92□□□□□ -1.14
SLIT3-201ENST00000332966 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.15
SLIT3-201ENST00000332966 FBN3Q75N90 2809 aa7.89□□□□□ -1.15
SLIT3-201ENST00000332966 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
SLIT3-201ENST00000332966 NBPF19A0A087WUL8 3843 aa7.86□□□□□ -1.15
SLIT3-201ENST00000332966 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
SLIT3-201ENST00000332966 ZFHX3Q15911 3703 aa7.8□□□□□ -1.16
SLIT3-201ENST00000332966 CSMD2Q7Z408 3487 aa7.78□□□□□ -1.16
SLIT3-201ENST00000332966 TRRAPQ9Y4A5 3859 aa7.77□□□□□ -1.17
SLIT3-201ENST00000332966 MEGF8Q7Z7M0 2845 aa7.77□□□□□ -1.17
SLIT3-201ENST00000332966 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
SLIT3-201ENST00000332966 VPS13CQ709C8 3753 aa7.7□□□□□ -1.18
SLIT3-201ENST00000332966 A0A1B0GVY2 172 aa7.69□□□□□ -1.18
SLIT3-201ENST00000332966 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
SLIT3-201ENST00000332966 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
SLIT3-201ENST00000332966 COL7A1Q02388 2944 aa7.55□□□□□ -1.2
SLIT3-201ENST00000332966 HUWE1Q7Z6Z7 4374 aaKnown RBP7.46□□□□□ -1.21
SLIT3-201ENST00000332966 AKAP9Q99996 3911 aa7.4□□□□□ -1.22
SLIT3-201ENST00000332966 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
SLIT3-201ENST00000332966 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
SLIT3-201ENST00000332966 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
SLIT3-201ENST00000332966 CSMD3Q7Z407 3707 aa7.26□□□□□ -1.25
SLIT3-201ENST00000332966 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
SLIT3-201ENST00000332966 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
SLIT3-201ENST00000332966 ALMS1Q8TCU4 4167 aa7.16□□□□□ -1.26
SLIT3-201ENST00000332966 INE1O15225 51 aa7.15□□□□□ -1.27
SLIT3-201ENST00000332966 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.28
SLIT3-201ENST00000332966 DNAH1Q9P2D7 4330 aa7.08□□□□□ -1.28
SLIT3-201ENST00000332966 DNAH9Q9NYC9 4486 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms