RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
SLIT3-201ENST00000332966 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
SLIT3-201ENST00000332966 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
SLIT3-201ENST00000332966 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.7
SLIT3-201ENST00000332966 PCGF6Q9BYE7 350 aa25.35■■□□□ 1.65
SLIT3-201ENST00000332966 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
SLIT3-201ENST00000332966 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
SLIT3-201ENST00000332966 HRCP23327 699 aa24.94■■□□□ 1.58
SLIT3-201ENST00000332966 MYT1Q01538 1121 aa24.83■■□□□ 1.57
SLIT3-201ENST00000332966 CENPBP07199 599 aaPredicted RBP24.72■■□□□ 1.55
SLIT3-201ENST00000332966 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
SLIT3-201ENST00000332966 FAM9AQ8IZU1 332 aaPredicted RBP24.44■■□□□ 1.5
SLIT3-201ENST00000332966 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
SLIT3-201ENST00000332966 CCER1Q8TC90 406 aaPredicted RBP24.34■■□□□ 1.49
SLIT3-201ENST00000332966 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
SLIT3-201ENST00000332966 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
SLIT3-201ENST00000332966 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
SLIT3-201ENST00000332966 APLP2Q06481 763 aa24.19■■□□□ 1.46
SLIT3-201ENST00000332966 TTBK1Q5TCY1 1321 aaPredicted RBP24.06■■□□□ 1.44
SLIT3-201ENST00000332966 LOC105371045A0A1W2PR82 267 aa23.95■■□□□ 1.42
SLIT3-201ENST00000332966 YTHDC1Q96MU7 727 aaKnown RBP23.91■■□□□ 1.42
SLIT3-201ENST00000332966 ERICH6Q7L0X2 663 aa23.79■■□□□ 1.4
SLIT3-201ENST00000332966 NEFLP07196 543 aa23.6■■□□□ 1.37
SLIT3-201ENST00000332966 UBTFP17480 764 aaKnown RBP23.58■■□□□ 1.37
SLIT3-201ENST00000332966 DIEXFQ68CQ4 756 aaKnown RBP23.57■■□□□ 1.36
SLIT3-201ENST00000332966 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.34
SLIT3-201ENST00000332966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.42■■□□□ 1.34
SLIT3-201ENST00000332966 ACIN1Q9UKV3 1341 aaKnown RBP23.36■■□□□ 1.33
SLIT3-201ENST00000332966 RANGAP1P46060 587 aaPredicted RBP23.35■■□□□ 1.33
SLIT3-201ENST00000332966 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
SLIT3-201ENST00000332966 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
SLIT3-201ENST00000332966 SCAF1Q9H7N4 1312 aaKnown RBP23.06■■□□□ 1.28
SLIT3-201ENST00000332966 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
SLIT3-201ENST00000332966 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
SLIT3-201ENST00000332966 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
SLIT3-201ENST00000332966 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
SLIT3-201ENST00000332966 ITGAEP38570 1179 aa22.77■■□□□ 1.24
SLIT3-201ENST00000332966 CLSPNQ9HAW4 1339 aa22.77■■□□□ 1.24
SLIT3-201ENST00000332966 BCANQ96GW7 911 aa22.66■■□□□ 1.22
SLIT3-201ENST00000332966 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.22
SLIT3-201ENST00000332966 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
SLIT3-201ENST00000332966 RTL5Q5HYW3 569 aaPredicted RBP22.6■■□□□ 1.21
SLIT3-201ENST00000332966 DAXXQ9UER7 740 aaPredicted RBP22.54■■□□□ 1.2
SLIT3-201ENST00000332966 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
SLIT3-201ENST00000332966 ANP32CO43423 234 aa22.44■■□□□ 1.18
SLIT3-201ENST00000332966 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
SLIT3-201ENST00000332966 MIER1Q8N108 512 aa22.34■■□□□ 1.17
SLIT3-201ENST00000332966 FKBP8Q14318 412 aa22.29■■□□□ 1.16
SLIT3-201ENST00000332966 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
SLIT3-201ENST00000332966 FAM50AQ14320 339 aaKnown RBP22.25■■□□□ 1.15
SLIT3-201ENST00000332966 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
SLIT3-201ENST00000332966 CNGB1Q14028 1251 aaPredicted RBP22.15■■□□□ 1.14
SLIT3-201ENST00000332966 ANP32EQ9BTT0 268 aa22.15■■□□□ 1.14
SLIT3-201ENST00000332966 ANP32AP39687 249 aaKnown RBP22.06■■□□□ 1.12
SLIT3-201ENST00000332966 DDX10Q13206 875 aaKnown RBP21.99■■□□□ 1.11
SLIT3-201ENST00000332966 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
SLIT3-201ENST00000332966 HNRNPUQ00839 825 aaKnown RBP eCLIP21.91■■□□□ 1.1
SLIT3-201ENST00000332966 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
SLIT3-201ENST00000332966 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
SLIT3-201ENST00000332966 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
SLIT3-201ENST00000332966 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
SLIT3-201ENST00000332966 ABCC9O60706 1549 aa21.82■■□□□ 1.08
SLIT3-201ENST00000332966 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
SLIT3-201ENST00000332966 EEA1Q15075 1411 aa21.79■■□□□ 1.08
SLIT3-201ENST00000332966 CLIP1P30622 1438 aa21.76■■□□□ 1.07
SLIT3-201ENST00000332966 TNIKQ9UKE5 1360 aa21.75■■□□□ 1.07
SLIT3-201ENST00000332966 BCL11AQ9H165 835 aa21.74■■□□□ 1.07
SLIT3-201ENST00000332966 NPM2Q86SE8 214 aaKnown RBP21.73■■□□□ 1.07
SLIT3-201ENST00000332966 NBR1Q14596 966 aa21.72■■□□□ 1.07
SLIT3-201ENST00000332966 ZBTB47Q9UFB7 747 aaPredicted RBP21.72■■□□□ 1.07
SLIT3-201ENST00000332966 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
SLIT3-201ENST00000332966 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
SLIT3-201ENST00000332966 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
SLIT3-201ENST00000332966 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.06
SLIT3-201ENST00000332966 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.06
SLIT3-201ENST00000332966 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
SLIT3-201ENST00000332966 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
SLIT3-201ENST00000332966 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
SLIT3-201ENST00000332966 P3H3Q8IVL6 736 aa21.56■■□□□ 1.04
SLIT3-201ENST00000332966 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
SLIT3-201ENST00000332966 TSHZ2Q9NRE2 1034 aa21.52■■□□□ 1.04
SLIT3-201ENST00000332966 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
SLIT3-201ENST00000332966 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
SLIT3-201ENST00000332966 GLIPR1L2Q4G1C9 344 aa21.45■■□□□ 1.02
SLIT3-201ENST00000332966 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
SLIT3-201ENST00000332966 PPP4R2Q9NY27 417 aa21.44■■□□□ 1.02
SLIT3-201ENST00000332966 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
SLIT3-201ENST00000332966 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
SLIT3-201ENST00000332966 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.01
SLIT3-201ENST00000332966 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
SLIT3-201ENST00000332966 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
SLIT3-201ENST00000332966 NOP58Q9Y2X3 529 aaKnown RBP21.36■■□□□ 1.01
SLIT3-201ENST00000332966 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
SLIT3-201ENST00000332966 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
SLIT3-201ENST00000332966 DEKP35659 375 aaKnown RBP21.29■■□□□ 1
SLIT3-201ENST00000332966 TIMELESSQ9UNS1 1208 aa21.29■■□□□ 1
SLIT3-201ENST00000332966 PPM1GO15355 546 aaPredicted RBP21.26■□□□□ 0.99
SLIT3-201ENST00000332966 UPF2Q9HAU5 1272 aaKnown RBP21.26■□□□□ 0.99
SLIT3-201ENST00000332966 SOGA1O94964 1423 aa21.24■□□□□ 0.99
SLIT3-201ENST00000332966 ERICH6BQ5W0A0 696 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms