RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 CDK2AP2O75956 126 aa13.3□□□□□ -0.28
GRAMD1A-201ENST00000317991 RBM12B-AS1Q9P1G2 102 aa13.3□□□□□ -0.28
GRAMD1A-201ENST00000317991 WWC2-AS2Q96NR7 200 aa13.28□□□□□ -0.28
GRAMD1A-201ENST00000317991 LINC00483Q53H64 154 aa13.28□□□□□ -0.28
GRAMD1A-201ENST00000317991 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
GRAMD1A-201ENST00000317991 DYNC2H1Q8NCM8 4307 aaKnown RBP13.28□□□□□ -0.28
GRAMD1A-201ENST00000317991 Q5W150 140 aa13.26□□□□□ -0.29
GRAMD1A-201ENST00000317991 SPACA4Q8TDM5 124 aa13.26□□□□□ -0.29
GRAMD1A-201ENST00000317991 SPINK6Q6UWN8 80 aa13.24□□□□□ -0.29
GRAMD1A-201ENST00000317991 HECTD4Q9Y4D8 3996 aa13.23□□□□□ -0.29
GRAMD1A-201ENST00000317991 NBDYA0A0U1RRE5 68 aa13.23□□□□□ -0.29
GRAMD1A-201ENST00000317991 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
GRAMD1A-201ENST00000317991 Q6ZRN7 208 aaPredicted RBP13.23□□□□□ -0.29
GRAMD1A-201ENST00000317991 PSORS1C2Q9UIG4 136 aa13.2□□□□□ -0.3
GRAMD1A-201ENST00000317991 PRKDCP78527 4128 aaKnown RBP13.2□□□□□ -0.3
GRAMD1A-201ENST00000317991 ALMS1Q8TCU4 4167 aa13.14□□□□□ -0.31
GRAMD1A-201ENST00000317991 ZNF706Q9Y5V0 76 aaPredicted RBP13.14□□□□□ -0.31
GRAMD1A-201ENST00000317991 DNAH17Q9UFH2 4485 aa13.13□□□□□ -0.31
GRAMD1A-201ENST00000317991 KRTAP13-3Q3SY46 172 aa13.13□□□□□ -0.31
GRAMD1A-201ENST00000317991 C7orf65Q6ZTY9 151 aa13.13□□□□□ -0.31
GRAMD1A-201ENST00000317991 IGLV5-52A0A0A0MRZ9 124 aa13.12□□□□□ -0.31
GRAMD1A-201ENST00000317991 ZNF861PO60384 105 aa13.08□□□□□ -0.31
GRAMD1A-201ENST00000317991 STARD9Q9P2P6 4700 aa13.08□□□□□ -0.32
GRAMD1A-201ENST00000317991 DNAH2Q9P225 4427 aa13.06□□□□□ -0.32
GRAMD1A-201ENST00000317991 VPS13DQ5THJ4 4388 aa13.06□□□□□ -0.32
GRAMD1A-201ENST00000317991 KMT2AQ03164 3969 aa13.05□□□□□ -0.32
GRAMD1A-201ENST00000317991 CIRBP-AS1Q8TBR5 109 aa13.05□□□□□ -0.32
GRAMD1A-201ENST00000317991 A0A087WTM6 91 aa13.04□□□□□ -0.32
GRAMD1A-201ENST00000317991 RETNLBQ9BQ08 111 aa13.03□□□□□ -0.32
GRAMD1A-201ENST00000317991 ACYP2P14621 99 aa13.03□□□□□ -0.32
GRAMD1A-201ENST00000317991 RTL8CO15255 209 aa13.01□□□□□ -0.33
GRAMD1A-201ENST00000317991 TGP01266 2768 aa12.98□□□□□ -0.33
GRAMD1A-201ENST00000317991 FBN3Q75N90 2809 aa12.97□□□□□ -0.33
GRAMD1A-201ENST00000317991 PRAC1Q96KF2 57 aa12.94□□□□□ -0.34
GRAMD1A-201ENST00000317991 DMAC1Q96GE9 116 aa12.93□□□□□ -0.34
GRAMD1A-201ENST00000317991 LINC00313P59037 77 aa12.92□□□□□ -0.34
GRAMD1A-201ENST00000317991 ADM2Q7Z4H4 148 aa12.9□□□□□ -0.34
GRAMD1A-201ENST00000317991 NUPR2A6NF83 97 aa12.88□□□□□ -0.35
GRAMD1A-201ENST00000317991 IGLV7-43P04211 117 aa12.87□□□□□ -0.35
GRAMD1A-201ENST00000317991 A0A1B0GU69 56 aa12.86□□□□□ -0.35
GRAMD1A-201ENST00000317991 DNAH6Q9C0G6 4158 aa12.86□□□□□ -0.35
GRAMD1A-201ENST00000317991 KRTAP21-3Q3LHN1 58 aa12.85□□□□□ -0.35
GRAMD1A-201ENST00000317991 C8orf87E5RJ46 101 aa12.84□□□□□ -0.35
GRAMD1A-201ENST00000317991 DNAH11Q96DT5 4516 aa12.83□□□□□ -0.35
GRAMD1A-201ENST00000317991 FAM229AH3BQW9 127 aa12.8□□□□□ -0.36
GRAMD1A-201ENST00000317991 IGKV2-30P06310 120 aa12.79□□□□□ -0.36
GRAMD1A-201ENST00000317991 SSBP3-AS1Q7Z2R9 100 aa12.76□□□□□ -0.37
GRAMD1A-201ENST00000317991 SPATA8Q6RVD6 105 aa12.75□□□□□ -0.37
GRAMD1A-201ENST00000317991 DNAH5Q8TE73 4624 aa12.71□□□□□ -0.38
GRAMD1A-201ENST00000317991 IGKV2D-30A0A075B6S6 120 aa12.7□□□□□ -0.38
GRAMD1A-201ENST00000317991 PLA2G1BP04054 148 aaKnown RBP12.7□□□□□ -0.38
GRAMD1A-201ENST00000317991 MIR22HGQ0VDD5 57 aa12.69□□□□□ -0.38
GRAMD1A-201ENST00000317991 KRTAP13-2Q52LG2 175 aa12.68□□□□□ -0.38
GRAMD1A-201ENST00000317991 KRTAP16-1A8MUX0 517 aa12.67□□□□□ -0.38
GRAMD1A-201ENST00000317991 UQCR11O14957 56 aa12.65□□□□□ -0.38
GRAMD1A-201ENST00000317991 LRP1BQ9NZR2 4599 aa12.65□□□□□ -0.38
GRAMD1A-201ENST00000317991 C1orf134Q5TEV5 83 aa12.59□□□□□ -0.39
GRAMD1A-201ENST00000317991 SPINK1P00995 79 aa12.54□□□□□ -0.4
GRAMD1A-201ENST00000317991 KRTAP10-2P60368 255 aa12.54□□□□□ -0.4
GRAMD1A-201ENST00000317991 LINC01554Q52M75 96 aa12.52□□□□□ -0.41
GRAMD1A-201ENST00000317991 VPS13BQ7Z7G8 4022 aa12.47□□□□□ -0.41
GRAMD1A-201ENST00000317991 Q8N1X5 172 aa12.47□□□□□ -0.41
GRAMD1A-201ENST00000317991 CSAG1Q6PB30 78 aa12.44□□□□□ -0.42
GRAMD1A-201ENST00000317991 LY6G6CO95867 125 aa12.44□□□□□ -0.42
GRAMD1A-201ENST00000317991 KRTAP1-4P0C5Y4 121 aa12.42□□□□□ -0.42
GRAMD1A-201ENST00000317991 PKD1P98161 4303 aa12.38□□□□□ -0.43
GRAMD1A-201ENST00000317991 HYDINQ4G0P3 5121 aa12.37□□□□□ -0.43
GRAMD1A-201ENST00000317991 KRTAP10-1P60331 282 aa12.35□□□□□ -0.43
GRAMD1A-201ENST00000317991 FAT2Q9NYQ8 4349 aa12.35□□□□□ -0.43
GRAMD1A-201ENST00000317991 C4orf48Q5BLP8 95 aa12.31□□□□□ -0.44
GRAMD1A-201ENST00000317991 TYMSOSQ8TAI1 123 aa12.26□□□□□ -0.45
GRAMD1A-201ENST00000317991 Q6ZSA8 131 aa12.26□□□□□ -0.45
GRAMD1A-201ENST00000317991 H0YAA0 97 aa12.23□□□□□ -0.45
GRAMD1A-201ENST00000317991 SACSQ9NZJ4 4579 aa12.16□□□□□ -0.46
GRAMD1A-201ENST00000317991 A8MUU9 505 aa12.13□□□□□ -0.47
GRAMD1A-201ENST00000317991 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
GRAMD1A-201ENST00000317991 KRTAP3-1Q9BYR8 98 aa12.1□□□□□ -0.47
GRAMD1A-201ENST00000317991 C9orf92A6NGG3 77 aa12.1□□□□□ -0.47
GRAMD1A-201ENST00000317991 LINC00304Q8N9R0 145 aa12.09□□□□□ -0.47
GRAMD1A-201ENST00000317991 KMT2CQ8NEZ4 4911 aaKnown RBP12.06□□□□□ -0.48
GRAMD1A-201ENST00000317991 A0A1B0GU33 70 aa12.06□□□□□ -0.48
GRAMD1A-201ENST00000317991 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
GRAMD1A-201ENST00000317991 H3BS24 57 aa12□□□□□ -0.49
GRAMD1A-201ENST00000317991 H1FX-AS1Q4G0G2 97 aa11.98□□□□□ -0.49
GRAMD1A-201ENST00000317991 KRTAP25-1Q3LHN0 102 aa11.97□□□□□ -0.49
GRAMD1A-201ENST00000317991 CRIPTQ9P021 101 aa11.93□□□□□ -0.5
GRAMD1A-201ENST00000317991 C20orf166-AS1Q96NR2 134 aa11.91□□□□□ -0.5
GRAMD1A-201ENST00000317991 FAT1Q14517 4588 aa11.91□□□□□ -0.5
GRAMD1A-201ENST00000317991 RYR2Q92736 4967 aa11.89□□□□□ -0.51
GRAMD1A-201ENST00000317991 RPS29P62273 56 aaKnown RBP11.87□□□□□ -0.51
GRAMD1A-201ENST00000317991 SMR3BP02814 79 aaPredicted RBP11.86□□□□□ -0.51
GRAMD1A-201ENST00000317991 PKHD1L1Q86WI1 4243 aa11.81□□□□□ -0.52
GRAMD1A-201ENST00000317991 COX6B2Q6YFQ2 88 aa11.8□□□□□ -0.52
GRAMD1A-201ENST00000317991 DYNC1H1Q14204 4646 aaKnown RBP11.8□□□□□ -0.52
GRAMD1A-201ENST00000317991 ROMO1P60602 79 aa11.76□□□□□ -0.53
GRAMD1A-201ENST00000317991 RYR3Q15413 4870 aa11.76□□□□□ -0.53
GRAMD1A-201ENST00000317991 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
GRAMD1A-201ENST00000317991 K7ERS5 55 aa11.69□□□□□ -0.54
GRAMD1A-201ENST00000317991 DMBT1Q9UGM3 2413 aaPredicted RBP11.68□□□□□ -0.54
GRAMD1A-201ENST00000317991 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms