RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 STARD9Q9P2P6 4700 aa9.77□□□□□ -0.84
CACFD1-202ENST00000316948 MDFIQ99750 246 aa9.77□□□□□ -0.84
CACFD1-202ENST00000316948 NBDYA0A0U1RRE5 68 aa9.77□□□□□ -0.85
CACFD1-202ENST00000316948 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
CACFD1-202ENST00000316948 FRAS1Q86XX4 4008 aa9.77□□□□□ -0.85
CACFD1-202ENST00000316948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.76□□□□□ -0.85
CACFD1-202ENST00000316948 PRKDCP78527 4128 aaKnown RBP9.76□□□□□ -0.85
CACFD1-202ENST00000316948 Q6ZRN7 208 aaPredicted RBP9.74□□□□□ -0.85
CACFD1-202ENST00000316948 KMT2AQ03164 3969 aa9.73□□□□□ -0.85
CACFD1-202ENST00000316948 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
CACFD1-202ENST00000316948 C7orf65Q6ZTY9 151 aa9.72□□□□□ -0.85
CACFD1-202ENST00000316948 MEGF8Q7Z7M0 2845 aa9.7□□□□□ -0.86
CACFD1-202ENST00000316948 Q5W150 140 aa9.7□□□□□ -0.86
CACFD1-202ENST00000316948 SPACA4Q8TDM5 124 aa9.7□□□□□ -0.86
CACFD1-202ENST00000316948 HECTD4Q9Y4D8 3996 aa9.7□□□□□ -0.86
CACFD1-202ENST00000316948 WWC2-AS2Q96NR7 200 aa9.69□□□□□ -0.86
CACFD1-202ENST00000316948 LINC00483Q53H64 154 aa9.69□□□□□ -0.86
CACFD1-202ENST00000316948 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
CACFD1-202ENST00000316948 ZNF706Q9Y5V0 76 aaPredicted RBP9.64□□□□□ -0.87
CACFD1-202ENST00000316948 PSORS1C2Q9UIG4 136 aa9.63□□□□□ -0.87
CACFD1-202ENST00000316948 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
CACFD1-202ENST00000316948 A0A087WTM6 91 aa9.61□□□□□ -0.87
CACFD1-202ENST00000316948 FBN3Q75N90 2809 aa9.61□□□□□ -0.87
CACFD1-202ENST00000316948 NUPR2A6NF83 97 aa9.6□□□□□ -0.87
CACFD1-202ENST00000316948 DNAH2Q9P225 4427 aa9.6□□□□□ -0.87
CACFD1-202ENST00000316948 ACYP2P14621 99 aa9.6□□□□□ -0.87
CACFD1-202ENST00000316948 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
CACFD1-202ENST00000316948 IGLV5-52A0A0A0MRZ9 124 aa9.58□□□□□ -0.88
CACFD1-202ENST00000316948 RTL8CO15255 209 aa9.58□□□□□ -0.88
CACFD1-202ENST00000316948 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
CACFD1-202ENST00000316948 DNAH17Q9UFH2 4485 aa9.57□□□□□ -0.88
CACFD1-202ENST00000316948 KRTAP13-3Q3SY46 172 aa9.57□□□□□ -0.88
CACFD1-202ENST00000316948 PRAC1Q96KF2 57 aa9.57□□□□□ -0.88
CACFD1-202ENST00000316948 LINC00313P59037 77 aa9.56□□□□□ -0.88
CACFD1-202ENST00000316948 ZNF861PO60384 105 aa9.56□□□□□ -0.88
CACFD1-202ENST00000316948 ADM2Q7Z4H4 148 aa9.52□□□□□ -0.89
CACFD1-202ENST00000316948 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
CACFD1-202ENST00000316948 A0A1B0GU69 56 aa9.5□□□□□ -0.89
CACFD1-202ENST00000316948 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
CACFD1-202ENST00000316948 ALMS1Q8TCU4 4167 aa9.44□□□□□ -0.9
CACFD1-202ENST00000316948 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
CACFD1-202ENST00000316948 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
CACFD1-202ENST00000316948 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
CACFD1-202ENST00000316948 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
CACFD1-202ENST00000316948 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
CACFD1-202ENST00000316948 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
CACFD1-202ENST00000316948 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
CACFD1-202ENST00000316948 IGKV2-30P06310 120 aa9.37□□□□□ -0.91
CACFD1-202ENST00000316948 DNAH5Q8TE73 4624 aa9.36□□□□□ -0.91
CACFD1-202ENST00000316948 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
CACFD1-202ENST00000316948 UQCR11O14957 56 aa9.35□□□□□ -0.91
CACFD1-202ENST00000316948 C1orf134Q5TEV5 83 aa9.35□□□□□ -0.91
CACFD1-202ENST00000316948 SSBP3-AS1Q7Z2R9 100 aa9.33□□□□□ -0.92
CACFD1-202ENST00000316948 HYDINQ4G0P3 5121 aa9.31□□□□□ -0.92
CACFD1-202ENST00000316948 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
CACFD1-202ENST00000316948 LY6G6CO95867 125 aa9.28□□□□□ -0.92
CACFD1-202ENST00000316948 KRTAP10-2P60368 255 aa9.27□□□□□ -0.93
CACFD1-202ENST00000316948 LRP1BQ9NZR2 4599 aa9.26□□□□□ -0.93
CACFD1-202ENST00000316948 SPINK1P00995 79 aa9.25□□□□□ -0.93
CACFD1-202ENST00000316948 KRTAP16-1A8MUX0 517 aa9.24□□□□□ -0.93
CACFD1-202ENST00000316948 KRTAP13-2Q52LG2 175 aa9.23□□□□□ -0.93
CACFD1-202ENST00000316948 CSAG1Q6PB30 78 aa9.21□□□□□ -0.94
CACFD1-202ENST00000316948 Q8N1X5 172 aa9.16□□□□□ -0.94
CACFD1-202ENST00000316948 FAT2Q9NYQ8 4349 aa9.16□□□□□ -0.94
CACFD1-202ENST00000316948 VPS13BQ7Z7G8 4022 aa9.16□□□□□ -0.94
CACFD1-202ENST00000316948 PKD1P98161 4303 aa9.14□□□□□ -0.95
CACFD1-202ENST00000316948 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
CACFD1-202ENST00000316948 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
CACFD1-202ENST00000316948 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
CACFD1-202ENST00000316948 KRTAP1-4P0C5Y4 121 aa9.08□□□□□ -0.96
CACFD1-202ENST00000316948 Q6ZSA8 131 aa9.07□□□□□ -0.96
CACFD1-202ENST00000316948 H0YAA0 97 aa8.98□□□□□ -0.97
CACFD1-202ENST00000316948 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
CACFD1-202ENST00000316948 H3BS24 57 aa8.97□□□□□ -0.97
CACFD1-202ENST00000316948 A8MUU9 505 aa8.92□□□□□ -0.98
CACFD1-202ENST00000316948 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.99
CACFD1-202ENST00000316948 A0A1B0GU33 70 aa8.89□□□□□ -0.99
CACFD1-202ENST00000316948 FAT1Q14517 4588 aa8.87□□□□□ -0.99
CACFD1-202ENST00000316948 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
CACFD1-202ENST00000316948 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
CACFD1-202ENST00000316948 SACSQ9NZJ4 4579 aa8.85□□□□□ -0.99
CACFD1-202ENST00000316948 KRTAP25-1Q3LHN0 102 aa8.84□□□□□ -0.99
CACFD1-202ENST00000316948 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
CACFD1-202ENST00000316948 CRIPTQ9P021 101 aa8.82□□□□□ -1
CACFD1-202ENST00000316948 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
CACFD1-202ENST00000316948 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
CACFD1-202ENST00000316948 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
CACFD1-202ENST00000316948 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1.01
CACFD1-202ENST00000316948 ROMO1P60602 79 aa8.71□□□□□ -1.01
CACFD1-202ENST00000316948 RPS29P62273 56 aaKnown RBP8.71□□□□□ -1.02
CACFD1-202ENST00000316948 C20orf166-AS1Q96NR2 134 aa8.69□□□□□ -1.02
CACFD1-202ENST00000316948 K7ERS5 55 aa8.68□□□□□ -1.02
CACFD1-202ENST00000316948 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
CACFD1-202ENST00000316948 PKHD1L1Q86WI1 4243 aa8.66□□□□□ -1.02
CACFD1-202ENST00000316948 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
CACFD1-202ENST00000316948 APOBP04114 4563 aaKnown RBP8.64□□□□□ -1.03
CACFD1-202ENST00000316948 RYR2Q92736 4967 aa8.6□□□□□ -1.03
CACFD1-202ENST00000316948 LRP1Q07954 4544 aaKnown RBP8.58□□□□□ -1.04
CACFD1-202ENST00000316948 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
CACFD1-202ENST00000316948 RYR3Q15413 4870 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms