RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 WWC2-AS2Q96NR7 200 aa8.73□□□□□ -1.01
COL6A2-202ENST00000310645 PRAC1Q96KF2 57 aa8.73□□□□□ -1.01
COL6A2-202ENST00000310645 APLNQ9ULZ1 77 aa8.72□□□□□ -1.01
COL6A2-202ENST00000310645 PSORS1C2Q9UIG4 136 aa8.7□□□□□ -1.02
COL6A2-202ENST00000310645 CIRBP-AS1Q8TBR5 109 aa8.68□□□□□ -1.02
COL6A2-202ENST00000310645 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
COL6A2-202ENST00000310645 ACYP2P14621 99 aa8.68□□□□□ -1.02
COL6A2-202ENST00000310645 ZNF706Q9Y5V0 76 aaPredicted RBP8.68□□□□□ -1.02
COL6A2-202ENST00000310645 LINC00483Q53H64 154 aa8.68□□□□□ -1.02
COL6A2-202ENST00000310645 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
COL6A2-202ENST00000310645 LINC00313P59037 77 aa8.67□□□□□ -1.02
COL6A2-202ENST00000310645 ADM2Q7Z4H4 148 aa8.66□□□□□ -1.02
COL6A2-202ENST00000310645 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
COL6A2-202ENST00000310645 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
COL6A2-202ENST00000310645 A0A1B0GU69 56 aa8.62□□□□□ -1.03
COL6A2-202ENST00000310645 IGLV5-52A0A0A0MRZ9 124 aa8.61□□□□□ -1.03
COL6A2-202ENST00000310645 ZNF861PO60384 105 aa8.61□□□□□ -1.03
COL6A2-202ENST00000310645 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
COL6A2-202ENST00000310645 KRTAP13-3Q3SY46 172 aa8.59□□□□□ -1.03
COL6A2-202ENST00000310645 RTL8CO15255 209 aa8.56□□□□□ -1.04
COL6A2-202ENST00000310645 FRAS1Q86XX4 4008 aa8.56□□□□□ -1.04
COL6A2-202ENST00000310645 A0A087WTM6 91 aa8.55□□□□□ -1.04
COL6A2-202ENST00000310645 DMAC1Q96GE9 116 aa8.55□□□□□ -1.04
COL6A2-202ENST00000310645 DNAH8Q96JB1 4490 aa8.54□□□□□ -1.04
COL6A2-202ENST00000310645 PLECQ15149 4684 aaKnown RBP8.53□□□□□ -1.04
COL6A2-202ENST00000310645 C8orf87E5RJ46 101 aa8.53□□□□□ -1.04
COL6A2-202ENST00000310645 TGP01266 2768 aa8.51□□□□□ -1.05
COL6A2-202ENST00000310645 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
COL6A2-202ENST00000310645 IGKV2-30P06310 120 aa8.5□□□□□ -1.05
COL6A2-202ENST00000310645 MIR22HGQ0VDD5 57 aa8.5□□□□□ -1.05
COL6A2-202ENST00000310645 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
COL6A2-202ENST00000310645 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
COL6A2-202ENST00000310645 UQCR11O14957 56 aa8.47□□□□□ -1.05
COL6A2-202ENST00000310645 SPATA8Q6RVD6 105 aa8.47□□□□□ -1.05
COL6A2-202ENST00000310645 PLA2G1BP04054 148 aaKnown RBP8.46□□□□□ -1.05
COL6A2-202ENST00000310645 FBN3Q75N90 2809 aa8.46□□□□□ -1.05
COL6A2-202ENST00000310645 SPINK1P00995 79 aa8.44□□□□□ -1.06
COL6A2-202ENST00000310645 ALMS1Q8TCU4 4167 aa8.44□□□□□ -1.06
COL6A2-202ENST00000310645 NUPR2A6NF83 97 aa8.44□□□□□ -1.06
COL6A2-202ENST00000310645 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
COL6A2-202ENST00000310645 MEGF8Q7Z7M0 2845 aa8.41□□□□□ -1.06
COL6A2-202ENST00000310645 SSBP3-AS1Q7Z2R9 100 aa8.4□□□□□ -1.06
COL6A2-202ENST00000310645 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
COL6A2-202ENST00000310645 DNAH17Q9UFH2 4485 aa8.37□□□□□ -1.07
COL6A2-202ENST00000310645 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
COL6A2-202ENST00000310645 Q8N1X5 172 aa8.33□□□□□ -1.08
COL6A2-202ENST00000310645 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
COL6A2-202ENST00000310645 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
COL6A2-202ENST00000310645 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
COL6A2-202ENST00000310645 KMT2AQ03164 3969 aa8.3□□□□□ -1.08
COL6A2-202ENST00000310645 DYNC2H1Q8NCM8 4307 aaKnown RBP8.29□□□□□ -1.08
COL6A2-202ENST00000310645 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
COL6A2-202ENST00000310645 C1orf134Q5TEV5 83 aa8.29□□□□□ -1.08
COL6A2-202ENST00000310645 VPS13DQ5THJ4 4388 aa8.27□□□□□ -1.09
COL6A2-202ENST00000310645 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
COL6A2-202ENST00000310645 FLG2Q5D862 2391 aaPredicted RBP8.23□□□□□ -1.09
COL6A2-202ENST00000310645 LY6G6CO95867 125 aa8.22□□□□□ -1.09
COL6A2-202ENST00000310645 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
COL6A2-202ENST00000310645 H3BS24 57 aa8.2□□□□□ -1.1
COL6A2-202ENST00000310645 DNAH6Q9C0G6 4158 aa8.18□□□□□ -1.1
COL6A2-202ENST00000310645 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
COL6A2-202ENST00000310645 Q6ZSA8 131 aa8.13□□□□□ -1.11
COL6A2-202ENST00000310645 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
COL6A2-202ENST00000310645 H0YAA0 97 aa8.11□□□□□ -1.11
COL6A2-202ENST00000310645 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
COL6A2-202ENST00000310645 KRTAP1-4P0C5Y4 121 aa8.1□□□□□ -1.11
COL6A2-202ENST00000310645 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
COL6A2-202ENST00000310645 PRKDCP78527 4128 aaKnown RBP8.08□□□□□ -1.12
COL6A2-202ENST00000310645 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
COL6A2-202ENST00000310645 A0A1B0GU33 70 aa8.05□□□□□ -1.12
COL6A2-202ENST00000310645 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
COL6A2-202ENST00000310645 LINC00304Q8N9R0 145 aa8.05□□□□□ -1.12
COL6A2-202ENST00000310645 DNAH5Q8TE73 4624 aa8.05□□□□□ -1.12
COL6A2-202ENST00000310645 A8MUU9 505 aa8.05□□□□□ -1.12
COL6A2-202ENST00000310645 DNHD1Q96M86 4753 aa8.01□□□□□ -1.13
COL6A2-202ENST00000310645 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
COL6A2-202ENST00000310645 DMBT1Q9UGM3 2413 aaPredicted RBP7.97□□□□□ -1.13
COL6A2-202ENST00000310645 H1FX-AS1Q4G0G2 97 aa7.96□□□□□ -1.13
COL6A2-202ENST00000310645 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
COL6A2-202ENST00000310645 VPS13BQ7Z7G8 4022 aa7.95□□□□□ -1.14
COL6A2-202ENST00000310645 ROMO1P60602 79 aa7.9□□□□□ -1.14
COL6A2-202ENST00000310645 K7ERS5 55 aa7.89□□□□□ -1.15
COL6A2-202ENST00000310645 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
COL6A2-202ENST00000310645 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
COL6A2-202ENST00000310645 FAT2Q9NYQ8 4349 aa7.82□□□□□ -1.16
COL6A2-202ENST00000310645 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
COL6A2-202ENST00000310645 HYDINQ4G0P3 5121 aa7.79□□□□□ -1.16
COL6A2-202ENST00000310645 A0A0D9SG42 100 aa7.79□□□□□ -1.16
COL6A2-202ENST00000310645 PKD1P98161 4303 aa7.79□□□□□ -1.16
COL6A2-202ENST00000310645 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
COL6A2-202ENST00000310645 P0C880 135 aa7.7□□□□□ -1.18
COL6A2-202ENST00000310645 SPINT4Q6UDR6 99 aa7.68□□□□□ -1.18
COL6A2-202ENST00000310645 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
COL6A2-202ENST00000310645 FAT1Q14517 4588 aa7.66□□□□□ -1.18
COL6A2-202ENST00000310645 PKHD1P08F94 4074 aa7.66□□□□□ -1.18
COL6A2-202ENST00000310645 KRTAP13-4Q3LI77 160 aa7.65□□□□□ -1.18
COL6A2-202ENST00000310645 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
COL6A2-202ENST00000310645 TPRXLQ17RH7 258 aa7.61□□□□□ -1.19
COL6A2-202ENST00000310645 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
COL6A2-202ENST00000310645 SACSQ9NZJ4 4579 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms