RNA–Protein interactions for RNA: ENST00000301923.13

TNRC6B-201, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TNRC6B, Length 15,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-201ENST00000301923 P0C880 135 aa3.12□□□□□ -1.91
TNRC6B-201ENST00000301923 MKI67P46013 3256 aaKnown RBP3.1□□□□□ -1.91
TNRC6B-201ENST00000301923 DMXL2Q8TDJ6 3036 aa3.1□□□□□ -1.91
TNRC6B-201ENST00000301923 XIRP2A4UGR9 3374 aa3.09□□□□□ -1.91
TNRC6B-201ENST00000301923 TENM2Q9NT68 2774 aa3.09□□□□□ -1.92
TNRC6B-201ENST00000301923 DCHS2Q6V1P9 2916 aa3.09□□□□□ -1.92
TNRC6B-201ENST00000301923 SMR3BP02814 79 aaPredicted RBP3.09□□□□□ -1.92
TNRC6B-201ENST00000301923 ZZEF1O43149 2961 aa3.08□□□□□ -1.92
TNRC6B-201ENST00000301923 COL12A1Q99715 3063 aa3.08□□□□□ -1.92
TNRC6B-201ENST00000301923 PRUNE2Q8WUY3 3088 aa3.08□□□□□ -1.92
TNRC6B-201ENST00000301923 MXRA5Q9NR99 2828 aa3.08□□□□□ -1.92
TNRC6B-201ENST00000301923 ATMQ13315 3056 aa3.07□□□□□ -1.92
TNRC6B-201ENST00000301923 Q5VSD8 79 aa3.06□□□□□ -1.92
TNRC6B-201ENST00000301923 VCANP13611 3396 aa3.05□□□□□ -1.92
TNRC6B-201ENST00000301923 FREM2Q5SZK8 3169 aa3.04□□□□□ -1.92
TNRC6B-201ENST00000301923 CDH23Q9H251 3354 aa3.04□□□□□ -1.92
TNRC6B-201ENST00000301923 VWFP04275 2813 aa3.03□□□□□ -1.92
TNRC6B-201ENST00000301923 H0YAA0 97 aa3.02□□□□□ -1.93
TNRC6B-201ENST00000301923 ADGRG4Q8IZF6 3080 aa3.02□□□□□ -1.93
TNRC6B-201ENST00000301923 TNP1P09430 55 aa3.02□□□□□ -1.93
TNRC6B-201ENST00000301923 INE1O15225 51 aa3.02□□□□□ -1.93
TNRC6B-201ENST00000301923 PKD1L1Q8TDX9 2849 aa3□□□□□ -1.93
TNRC6B-201ENST00000301923 LAMA1P25391 3075 aa3□□□□□ -1.93
TNRC6B-201ENST00000301923 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
TNRC6B-201ENST00000301923 FBN2P35556 2912 aa2.99□□□□□ -1.93
TNRC6B-201ENST00000301923 KRTAP23-1A1A580 65 aa2.99□□□□□ -1.93
TNRC6B-201ENST00000301923 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
TNRC6B-201ENST00000301923 TENM4Q6N022 2769 aa2.98□□□□□ -1.93
TNRC6B-201ENST00000301923 CELSR3Q9NYQ7 3312 aa2.98□□□□□ -1.93
TNRC6B-201ENST00000301923 COL7A1Q02388 2944 aa2.97□□□□□ -1.93
TNRC6B-201ENST00000301923 HRNRQ86YZ3 2850 aaPredicted RBP2.97□□□□□ -1.93
TNRC6B-201ENST00000301923 DNAH14Q0VDD8 3507 aa2.95□□□□□ -1.94
TNRC6B-201ENST00000301923 ZFHX3Q15911 3703 aa2.95□□□□□ -1.94
TNRC6B-201ENST00000301923 USP34Q70CQ2 3546 aa2.95□□□□□ -1.94
TNRC6B-201ENST00000301923 SZT2Q5T011 3432 aa2.94□□□□□ -1.94
TNRC6B-201ENST00000301923 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
TNRC6B-201ENST00000301923 REV3LO60673 3130 aa2.92□□□□□ -1.94
TNRC6B-201ENST00000301923 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
TNRC6B-201ENST00000301923 KRTAP1-5Q9BYS1 174 aa2.92□□□□□ -1.94
TNRC6B-201ENST00000301923 Q6ZRN7 208 aaPredicted RBP2.92□□□□□ -1.94
TNRC6B-201ENST00000301923 KRTAP15-1Q3LI76 137 aa2.91□□□□□ -1.94
TNRC6B-201ENST00000301923 KRTAP13-1Q8IUC0 172 aa2.9□□□□□ -1.95
TNRC6B-201ENST00000301923 CELSR1Q9NYQ6 3014 aa2.89□□□□□ -1.95
TNRC6B-201ENST00000301923 MYO15AQ9UKN7 3530 aa2.89□□□□□ -1.95
TNRC6B-201ENST00000301923 KRTAP10-1P60331 282 aa2.89□□□□□ -1.95
TNRC6B-201ENST00000301923 CFAP47Q6ZTR5 3102 aa2.88□□□□□ -1.95
TNRC6B-201ENST00000301923 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
TNRC6B-201ENST00000301923 OTOGQ6ZRI0 2925 aa2.88□□□□□ -1.95
TNRC6B-201ENST00000301923 KRTAP10-2P60368 255 aa2.87□□□□□ -1.95
TNRC6B-201ENST00000301923 MEGF8Q7Z7M0 2845 aa2.87□□□□□ -1.95
TNRC6B-201ENST00000301923 KRTAP7-1Q8IUC3 87 aa2.87□□□□□ -1.95
TNRC6B-201ENST00000301923 SPTBN5Q9NRC6 3674 aaKnown RBP2.86□□□□□ -1.95
TNRC6B-201ENST00000301923 COL6A3P12111 3177 aa2.85□□□□□ -1.95
TNRC6B-201ENST00000301923 KRTAP13-3Q3SY46 172 aa2.83□□□□□ -1.96
TNRC6B-201ENST00000301923 EYSQ5T1H1 3165 aa2.82□□□□□ -1.96
TNRC6B-201ENST00000301923 SPEGQ15772 3267 aa2.8□□□□□ -1.96
TNRC6B-201ENST00000301923 KRTAP13-2Q52LG2 175 aa2.78□□□□□ -1.97
TNRC6B-201ENST00000301923 LOC400499M0QZD8 3231 aa2.77□□□□□ -1.97
TNRC6B-201ENST00000301923 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
TNRC6B-201ENST00000301923 FBN1P35555 2871 aaKnown RBP2.76□□□□□ -1.97
TNRC6B-201ENST00000301923 FBN3Q75N90 2809 aa2.75□□□□□ -1.97
TNRC6B-201ENST00000301923 XP32Q5T750 250 aa2.74□□□□□ -1.97
TNRC6B-201ENST00000301923 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
TNRC6B-201ENST00000301923 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
TNRC6B-201ENST00000301923 WDFY3Q8IZQ1 3526 aa2.69□□□□□ -1.98
TNRC6B-201ENST00000301923 ASPMQ8IZT6 3477 aa2.69□□□□□ -1.98
TNRC6B-201ENST00000301923 DCHS1Q96JQ0 3298 aa2.67□□□□□ -1.98
TNRC6B-201ENST00000301923 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
TNRC6B-201ENST00000301923 ZFHX4Q86UP3 3567 aa2.67□□□□□ -1.98
TNRC6B-201ENST00000301923 RELNP78509 3460 aa2.67□□□□□ -1.98
TNRC6B-201ENST00000301923 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
TNRC6B-201ENST00000301923 LAMA5O15230 3695 aa2.66□□□□□ -1.98
TNRC6B-201ENST00000301923 DMDP11532 3685 aa2.59□□□□□ -1.99
TNRC6B-201ENST00000301923 KRTAP10-10P60014 251 aa2.58□□□□□ -2
TNRC6B-201ENST00000301923 A0A1B0GVY2 172 aa2.57□□□□□ -2
TNRC6B-201ENST00000301923 SMG1Q96Q15 3661 aaKnown RBP2.57□□□□□ -2
TNRC6B-201ENST00000301923 SVEP1Q4LDE5 3571 aa2.57□□□□□ -2
TNRC6B-201ENST00000301923 MUC3AQ02505 3323 aa2.55□□□□□ -2
TNRC6B-201ENST00000301923 KRTAP10-6P60371 365 aaPredicted RBP2.55□□□□□ -2
TNRC6B-201ENST00000301923 SPENQ96T58 3664 aaKnown RBP2.52□□□□□ -2.01
TNRC6B-201ENST00000301923 CUBNO60494 3623 aa2.52□□□□□ -2.01
TNRC6B-201ENST00000301923 CSMD1Q96PZ7 3565 aa2.51□□□□□ -2.01
TNRC6B-201ENST00000301923 NBPF19A0A087WUL8 3843 aa2.46□□□□□ -2.02
TNRC6B-201ENST00000301923 KRTAP3-1Q9BYR8 98 aa2.46□□□□□ -2.02
TNRC6B-201ENST00000301923 TRRAPQ9Y4A5 3859 aa2.43□□□□□ -2.02
TNRC6B-201ENST00000301923 KRTAP3-2Q9BYR7 98 aa2.43□□□□□ -2.02
TNRC6B-201ENST00000301923 KRTAP19-4Q3LI73 84 aa2.4□□□□□ -2.02
TNRC6B-201ENST00000301923 CSMD2Q7Z408 3487 aa2.36□□□□□ -2.03
TNRC6B-201ENST00000301923 KRTAP10-12P60413 245 aa2.34□□□□□ -2.04
TNRC6B-201ENST00000301923 KRTAP3-3Q9BYR6 98 aa2.32□□□□□ -2.04
TNRC6B-201ENST00000301923 ALMS1Q8TCU4 4167 aa2.32□□□□□ -2.04
TNRC6B-201ENST00000301923 AKAP9Q99996 3911 aa2.32□□□□□ -2.04
TNRC6B-201ENST00000301923 MT3P25713 68 aa2.3□□□□□ -2.04
TNRC6B-201ENST00000301923 VPS13CQ709C8 3753 aa2.3□□□□□ -2.04
TNRC6B-201ENST00000301923 BSNQ9UPA5 3926 aa2.29□□□□□ -2.04
TNRC6B-201ENST00000301923 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
TNRC6B-201ENST00000301923 KRTAP10-4P60372 401 aaPredicted RBP2.24□□□□□ -2.05
TNRC6B-201ENST00000301923 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
TNRC6B-201ENST00000301923 MT1HL1P0DM35 61 aa2.24□□□□□ -2.05
TNRC6B-201ENST00000301923 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms