RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 DCHS2Q6V1P9 2916 aa6.26□□□□□ -1.41
GCN1-201ENST00000300648 TRIOO75962 3097 aa6.24□□□□□ -1.41
GCN1-201ENST00000300648 HTTP42858 3142 aa6.22□□□□□ -1.41
GCN1-201ENST00000300648 TNRC18O15417 2968 aaPredicted RBP6.21□□□□□ -1.42
GCN1-201ENST00000300648 KRTAP13-2Q52LG2 175 aa6.21□□□□□ -1.42
GCN1-201ENST00000300648 NBEAQ8NFP9 2946 aa6.19□□□□□ -1.42
GCN1-201ENST00000300648 TACC2O95359 2948 aa6.19□□□□□ -1.42
GCN1-201ENST00000300648 MXRA5Q9NR99 2828 aa6.18□□□□□ -1.42
GCN1-201ENST00000300648 P0C880 135 aa6.17□□□□□ -1.42
GCN1-201ENST00000300648 DMXL2Q8TDJ6 3036 aa6.17□□□□□ -1.42
GCN1-201ENST00000300648 KRTAP7-1Q8IUC3 87 aa6.15□□□□□ -1.42
GCN1-201ENST00000300648 COL12A1Q99715 3063 aa6.15□□□□□ -1.43
GCN1-201ENST00000300648 CRYBG3Q68DQ2 2970 aa6.13□□□□□ -1.43
GCN1-201ENST00000300648 TGP01266 2768 aa6.12□□□□□ -1.43
GCN1-201ENST00000300648 ATMQ13315 3056 aa6.08□□□□□ -1.44
GCN1-201ENST00000300648 H0YAA0 97 aa6.08□□□□□ -1.44
GCN1-201ENST00000300648 LAMA1P25391 3075 aa6.08□□□□□ -1.44
GCN1-201ENST00000300648 PDZD2O15018 2839 aa6.07□□□□□ -1.44
GCN1-201ENST00000300648 LAMA3Q16787 3333 aa6.05□□□□□ -1.44
GCN1-201ENST00000300648 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
GCN1-201ENST00000300648 REV3LO60673 3130 aa6.04□□□□□ -1.44
GCN1-201ENST00000300648 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
GCN1-201ENST00000300648 XIRP2A4UGR9 3374 aa6.03□□□□□ -1.44
GCN1-201ENST00000300648 ADGRG4Q8IZF6 3080 aa6.03□□□□□ -1.44
GCN1-201ENST00000300648 FBN2P35556 2912 aa6.02□□□□□ -1.45
GCN1-201ENST00000300648 HRNRQ86YZ3 2850 aaPredicted RBP6.02□□□□□ -1.45
GCN1-201ENST00000300648 TENM2Q9NT68 2774 aa5.99□□□□□ -1.45
GCN1-201ENST00000300648 MKI67P46013 3256 aaKnown RBP5.97□□□□□ -1.45
GCN1-201ENST00000300648 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
GCN1-201ENST00000300648 USP34Q70CQ2 3546 aa5.96□□□□□ -1.46
GCN1-201ENST00000300648 XP32Q5T750 250 aa5.95□□□□□ -1.46
GCN1-201ENST00000300648 BOD1L1Q8NFC6 3051 aa5.95□□□□□ -1.46
GCN1-201ENST00000300648 KRTAP10-8P60410 259 aa5.94□□□□□ -1.46
GCN1-201ENST00000300648 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
GCN1-201ENST00000300648 CELSR1Q9NYQ6 3014 aa5.91□□□□□ -1.46
GCN1-201ENST00000300648 FREM2Q5SZK8 3169 aa5.9□□□□□ -1.46
GCN1-201ENST00000300648 VWFP04275 2813 aa5.89□□□□□ -1.47
GCN1-201ENST00000300648 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
GCN1-201ENST00000300648 BRCA2P51587 3418 aa5.8□□□□□ -1.48
GCN1-201ENST00000300648 DNAH14Q0VDD8 3507 aa5.78□□□□□ -1.48
GCN1-201ENST00000300648 DMXL1Q9Y485 3027 aa5.77□□□□□ -1.49
GCN1-201ENST00000300648 UNC80Q8N2C7 3258 aa5.77□□□□□ -1.49
GCN1-201ENST00000300648 CELSR3Q9NYQ7 3312 aa5.76□□□□□ -1.49
GCN1-201ENST00000300648 INE1O15225 51 aa5.76□□□□□ -1.49
GCN1-201ENST00000300648 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
GCN1-201ENST00000300648 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
GCN1-201ENST00000300648 COL6A3P12111 3177 aa5.72□□□□□ -1.49
GCN1-201ENST00000300648 KRTAP10-10P60014 251 aa5.69□□□□□ -1.5
GCN1-201ENST00000300648 EYSQ5T1H1 3165 aa5.67□□□□□ -1.5
GCN1-201ENST00000300648 COL7A1Q02388 2944 aa5.66□□□□□ -1.5
GCN1-201ENST00000300648 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
GCN1-201ENST00000300648 CDH23Q9H251 3354 aa5.59□□□□□ -1.51
GCN1-201ENST00000300648 ZFHX3Q15911 3703 aa5.59□□□□□ -1.52
GCN1-201ENST00000300648 VCANP13611 3396 aa5.58□□□□□ -1.52
GCN1-201ENST00000300648 CFAP47Q6ZTR5 3102 aa5.57□□□□□ -1.52
GCN1-201ENST00000300648 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
GCN1-201ENST00000300648 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
GCN1-201ENST00000300648 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
GCN1-201ENST00000300648 FBN1P35555 2871 aaKnown RBP5.55□□□□□ -1.52
GCN1-201ENST00000300648 SPEGQ15772 3267 aa5.52□□□□□ -1.53
GCN1-201ENST00000300648 MEGF8Q7Z7M0 2845 aa5.52□□□□□ -1.53
GCN1-201ENST00000300648 FBN3Q75N90 2809 aa5.47□□□□□ -1.53
GCN1-201ENST00000300648 SZT2Q5T011 3432 aa5.46□□□□□ -1.53
GCN1-201ENST00000300648 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
GCN1-201ENST00000300648 WDFY3Q8IZQ1 3526 aa5.35□□□□□ -1.55
GCN1-201ENST00000300648 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
GCN1-201ENST00000300648 SPTBN5Q9NRC6 3674 aaKnown RBP5.32□□□□□ -1.56
GCN1-201ENST00000300648 OTOGQ6ZRI0 2925 aa5.3□□□□□ -1.56
GCN1-201ENST00000300648 MYO15AQ9UKN7 3530 aa5.3□□□□□ -1.56
GCN1-201ENST00000300648 LOC400499M0QZD8 3231 aa5.29□□□□□ -1.56
GCN1-201ENST00000300648 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
GCN1-201ENST00000300648 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
GCN1-201ENST00000300648 ZFHX4Q86UP3 3567 aa5.26□□□□□ -1.57
GCN1-201ENST00000300648 DCHS1Q96JQ0 3298 aa5.18□□□□□ -1.58
GCN1-201ENST00000300648 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
GCN1-201ENST00000300648 ASPMQ8IZT6 3477 aa5.12□□□□□ -1.59
GCN1-201ENST00000300648 LAMA5O15230 3695 aa5.11□□□□□ -1.59
GCN1-201ENST00000300648 DMDP11532 3685 aa5.09□□□□□ -1.59
GCN1-201ENST00000300648 SPENQ96T58 3664 aaKnown RBP5.06□□□□□ -1.6
GCN1-201ENST00000300648 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
GCN1-201ENST00000300648 AKAP9Q99996 3911 aa5.02□□□□□ -1.61
GCN1-201ENST00000300648 TRRAPQ9Y4A5 3859 aa5.01□□□□□ -1.61
GCN1-201ENST00000300648 KRTAP12-3P60328 96 aa5□□□□□ -1.61
GCN1-201ENST00000300648 RELNP78509 3460 aa4.99□□□□□ -1.61
GCN1-201ENST00000300648 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
GCN1-201ENST00000300648 CSMD1Q96PZ7 3565 aa4.96□□□□□ -1.62
GCN1-201ENST00000300648 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
GCN1-201ENST00000300648 SMG1Q96Q15 3661 aaKnown RBP4.92□□□□□ -1.62
GCN1-201ENST00000300648 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
GCN1-201ENST00000300648 VPS13CQ709C8 3753 aa4.83□□□□□ -1.64
GCN1-201ENST00000300648 ALMS1Q8TCU4 4167 aa4.82□□□□□ -1.64
GCN1-201ENST00000300648 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
GCN1-201ENST00000300648 MUC3AQ02505 3323 aa4.79□□□□□ -1.64
GCN1-201ENST00000300648 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
GCN1-201ENST00000300648 SVEP1Q4LDE5 3571 aa4.72□□□□□ -1.65
GCN1-201ENST00000300648 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
GCN1-201ENST00000300648 CUBNO60494 3623 aa4.64□□□□□ -1.67
GCN1-201ENST00000300648 CMYA5Q8N3K9 4069 aa4.64□□□□□ -1.67
GCN1-201ENST00000300648 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
GCN1-201ENST00000300648 BSNQ9UPA5 3926 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms