RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
CCT3-201ENST00000295688 PLECQ15149 4684 aaKnown RBP8.78□□□□□ -1
CCT3-201ENST00000295688 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
CCT3-201ENST00000295688 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1.01
CCT3-201ENST00000295688 A6NN06 94 aa8.76□□□□□ -1.01
CCT3-201ENST00000295688 HRES1P13985 223 aa8.76□□□□□ -1.01
CCT3-201ENST00000295688 A0A087X002 238 aa8.76□□□□□ -1.01
CCT3-201ENST00000295688 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
CCT3-201ENST00000295688 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
CCT3-201ENST00000295688 IGLV7-43P04211 117 aa8.75□□□□□ -1.01
CCT3-201ENST00000295688 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
CCT3-201ENST00000295688 SSBP3-AS1Q7Z2R9 100 aa8.75□□□□□ -1.01
CCT3-201ENST00000295688 CSMD3Q7Z407 3707 aa8.73□□□□□ -1.01
CCT3-201ENST00000295688 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
CCT3-201ENST00000295688 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.01
CCT3-201ENST00000295688 CIRBP-AS1Q8TBR5 109 aa8.71□□□□□ -1.02
CCT3-201ENST00000295688 DNAH17Q9UFH2 4485 aa8.69□□□□□ -1.02
CCT3-201ENST00000295688 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
CCT3-201ENST00000295688 SPTSSBQ8NFR3 76 aa8.69□□□□□ -1.02
CCT3-201ENST00000295688 DNAH8Q96JB1 4490 aa8.69□□□□□ -1.02
CCT3-201ENST00000295688 ACYP2P14621 99 aa8.68□□□□□ -1.02
CCT3-201ENST00000295688 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
CCT3-201ENST00000295688 Q5W150 140 aa8.68□□□□□ -1.02
CCT3-201ENST00000295688 ALMS1Q8TCU4 4167 aa8.64□□□□□ -1.03
CCT3-201ENST00000295688 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
CCT3-201ENST00000295688 LINC00313P59037 77 aa8.63□□□□□ -1.03
CCT3-201ENST00000295688 SPINK7P58062 85 aa8.63□□□□□ -1.03
CCT3-201ENST00000295688 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
CCT3-201ENST00000295688 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
CCT3-201ENST00000295688 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
CCT3-201ENST00000295688 DMAC1Q96GE9 116 aa8.59□□□□□ -1.03
CCT3-201ENST00000295688 PRKDCP78527 4128 aaKnown RBP8.59□□□□□ -1.03
CCT3-201ENST00000295688 STARD9Q9P2P6 4700 aa8.57□□□□□ -1.04
CCT3-201ENST00000295688 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
CCT3-201ENST00000295688 IGKV2-30P06310 120 aa8.54□□□□□ -1.04
CCT3-201ENST00000295688 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
CCT3-201ENST00000295688 LY6G6CO95867 125 aa8.51□□□□□ -1.05
CCT3-201ENST00000295688 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
CCT3-201ENST00000295688 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
CCT3-201ENST00000295688 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.05
CCT3-201ENST00000295688 A0A1B0GU69 56 aa8.46□□□□□ -1.06
CCT3-201ENST00000295688 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.06
CCT3-201ENST00000295688 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
CCT3-201ENST00000295688 KRTAP10-2P60368 255 aa8.45□□□□□ -1.06
CCT3-201ENST00000295688 FBN3Q75N90 2809 aa8.45□□□□□ -1.06
CCT3-201ENST00000295688 Q6ZSA8 131 aa8.45□□□□□ -1.06
CCT3-201ENST00000295688 MEGF8Q7Z7M0 2845 aa8.45□□□□□ -1.06
CCT3-201ENST00000295688 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
CCT3-201ENST00000295688 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
CCT3-201ENST00000295688 TGP01266 2768 aa8.39□□□□□ -1.07
CCT3-201ENST00000295688 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
CCT3-201ENST00000295688 KRTAP1-4P0C5Y4 121 aa8.38□□□□□ -1.07
CCT3-201ENST00000295688 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
CCT3-201ENST00000295688 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
CCT3-201ENST00000295688 KRTAP10-1P60331 282 aa8.38□□□□□ -1.07
CCT3-201ENST00000295688 SPINK1P00995 79 aa8.36□□□□□ -1.07
CCT3-201ENST00000295688 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
CCT3-201ENST00000295688 UQCR11O14957 56 aa8.35□□□□□ -1.07
CCT3-201ENST00000295688 TYMSOSQ8TAI1 123 aa8.34□□□□□ -1.08
CCT3-201ENST00000295688 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
CCT3-201ENST00000295688 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
CCT3-201ENST00000295688 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
CCT3-201ENST00000295688 PKD1P98161 4303 aa8.23□□□□□ -1.09
CCT3-201ENST00000295688 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
CCT3-201ENST00000295688 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
CCT3-201ENST00000295688 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.1
CCT3-201ENST00000295688 LINC01554Q52M75 96 aa8.15□□□□□ -1.11
CCT3-201ENST00000295688 Q8N1X5 172 aa8.15□□□□□ -1.11
CCT3-201ENST00000295688 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.11
CCT3-201ENST00000295688 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
CCT3-201ENST00000295688 A8MUU9 505 aa8.1□□□□□ -1.11
CCT3-201ENST00000295688 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
CCT3-201ENST00000295688 SACSQ9NZJ4 4579 aa8.08□□□□□ -1.12
CCT3-201ENST00000295688 C9orf92A6NGG3 77 aa8.01□□□□□ -1.13
CCT3-201ENST00000295688 CSAG1Q6PB30 78 aa8□□□□□ -1.13
CCT3-201ENST00000295688 HYDINQ4G0P3 5121 aa7.98□□□□□ -1.13
CCT3-201ENST00000295688 A0A1B0GU33 70 aa7.97□□□□□ -1.13
CCT3-201ENST00000295688 H0YAA0 97 aa7.96□□□□□ -1.14
CCT3-201ENST00000295688 KRTAP3-1Q9BYR8 98 aa7.96□□□□□ -1.14
CCT3-201ENST00000295688 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
CCT3-201ENST00000295688 DNHD1Q96M86 4753 aa7.93□□□□□ -1.14
CCT3-201ENST00000295688 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
CCT3-201ENST00000295688 PKHD1L1Q86WI1 4243 aa7.91□□□□□ -1.14
CCT3-201ENST00000295688 COX6B2Q6YFQ2 88 aa7.9□□□□□ -1.15
CCT3-201ENST00000295688 KRTAP10-4P60372 401 aaPredicted RBP7.88□□□□□ -1.15
CCT3-201ENST00000295688 A0A1B0GVY2 172 aa7.85□□□□□ -1.15
CCT3-201ENST00000295688 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
CCT3-201ENST00000295688 K7ERS5 55 aa7.83□□□□□ -1.16
CCT3-201ENST00000295688 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
CCT3-201ENST00000295688 PKHD1P08F94 4074 aa7.82□□□□□ -1.16
CCT3-201ENST00000295688 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
CCT3-201ENST00000295688 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
CCT3-201ENST00000295688 FAT1Q14517 4588 aa7.7□□□□□ -1.18
CCT3-201ENST00000295688 FLG2Q5D862 2391 aaPredicted RBP7.69□□□□□ -1.18
CCT3-201ENST00000295688 RPL37P61927 97 aaKnown RBP7.67□□□□□ -1.18
CCT3-201ENST00000295688 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
CCT3-201ENST00000295688 H3BS24 57 aa7.65□□□□□ -1.18
CCT3-201ENST00000295688 ROMO1P60602 79 aa7.65□□□□□ -1.18
CCT3-201ENST00000295688 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
CCT3-201ENST00000295688 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms