RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 HRES1P13985 223 aa14.16□□□□□ -0.14
RETREG2-201ENST00000273048 HECTD4Q9Y4D8 3996 aa14.16□□□□□ -0.14
RETREG2-201ENST00000273048 PSORS1C2Q9UIG4 136 aa14.16□□□□□ -0.14
RETREG2-201ENST00000273048 LINC01558Q9Y6Z2 57 aa14.13□□□□□ -0.15
RETREG2-201ENST00000273048 ZNF706Q9Y5V0 76 aaPredicted RBP14.12□□□□□ -0.15
RETREG2-201ENST00000273048 PLAC8Q9NZF1 115 aa14.1□□□□□ -0.15
RETREG2-201ENST00000273048 PRKDCP78527 4128 aaKnown RBP14.1□□□□□ -0.15
RETREG2-201ENST00000273048 IGLV5-52A0A0A0MRZ9 124 aa14.09□□□□□ -0.15
RETREG2-201ENST00000273048 SPINK6Q6UWN8 80 aa14.09□□□□□ -0.15
RETREG2-201ENST00000273048 ATP11AUNQ6ZP68 121 aa14.09□□□□□ -0.15
RETREG2-201ENST00000273048 A0A087WTM6 91 aa14.06□□□□□ -0.16
RETREG2-201ENST00000273048 Q5W150 140 aa14.06□□□□□ -0.16
RETREG2-201ENST00000273048 CDC42SE1Q9NRR8 79 aa14.05□□□□□ -0.16
RETREG2-201ENST00000273048 VPS13DQ5THJ4 4388 aa14.04□□□□□ -0.16
RETREG2-201ENST00000273048 NUPR2A6NF83 97 aa14.04□□□□□ -0.16
RETREG2-201ENST00000273048 ZNF861PO60384 105 aa14.04□□□□□ -0.16
RETREG2-201ENST00000273048 RTL8CO15255 209 aa14.02□□□□□ -0.16
RETREG2-201ENST00000273048 SPINK7P58062 85 aa14.02□□□□□ -0.16
RETREG2-201ENST00000273048 KTN1-AS1Q86SY8 53 aa14.01□□□□□ -0.17
RETREG2-201ENST00000273048 KMT2AQ03164 3969 aa14.01□□□□□ -0.17
RETREG2-201ENST00000273048 DNAH17Q9UFH2 4485 aa14□□□□□ -0.17
RETREG2-201ENST00000273048 PRR26Q8N8Z3 221 aa13.99□□□□□ -0.17
RETREG2-201ENST00000273048 A6NN06 94 aa13.98□□□□□ -0.17
RETREG2-201ENST00000273048 DNAH2Q9P225 4427 aa13.97□□□□□ -0.17
RETREG2-201ENST00000273048 KRTAP13-3Q3SY46 172 aa13.96□□□□□ -0.18
RETREG2-201ENST00000273048 CIRBP-AS1Q8TBR5 109 aa13.95□□□□□ -0.18
RETREG2-201ENST00000273048 MEGF8Q7Z7M0 2845 aa13.92□□□□□ -0.18
RETREG2-201ENST00000273048 FBN3Q75N90 2809 aa13.87□□□□□ -0.19
RETREG2-201ENST00000273048 ALMS1Q8TCU4 4167 aa13.86□□□□□ -0.19
RETREG2-201ENST00000273048 IGLV7-43P04211 117 aa13.84□□□□□ -0.19
RETREG2-201ENST00000273048 RETNLBQ9BQ08 111 aa13.82□□□□□ -0.2
RETREG2-201ENST00000273048 RBM12B-AS1Q9P1G2 102 aa13.82□□□□□ -0.2
RETREG2-201ENST00000273048 TGP01266 2768 aa13.82□□□□□ -0.2
RETREG2-201ENST00000273048 ACYP2P14621 99 aa13.8□□□□□ -0.2
RETREG2-201ENST00000273048 DNHD1Q96M86 4753 aa13.8□□□□□ -0.2
RETREG2-201ENST00000273048 DNAH6Q9C0G6 4158 aa13.75□□□□□ -0.21
RETREG2-201ENST00000273048 C8orf87E5RJ46 101 aa13.73□□□□□ -0.21
RETREG2-201ENST00000273048 C7orf65Q6ZTY9 151 aa13.73□□□□□ -0.21
RETREG2-201ENST00000273048 DNAH11Q96DT5 4516 aa13.73□□□□□ -0.21
RETREG2-201ENST00000273048 DMAC1Q96GE9 116 aa13.72□□□□□ -0.21
RETREG2-201ENST00000273048 LINC00313P59037 77 aa13.71□□□□□ -0.21
RETREG2-201ENST00000273048 SSBP3-AS1Q7Z2R9 100 aa13.69□□□□□ -0.22
RETREG2-201ENST00000273048 FAM229AH3BQW9 127 aa13.65□□□□□ -0.22
RETREG2-201ENST00000273048 C1orf134Q5TEV5 83 aa13.63□□□□□ -0.23
RETREG2-201ENST00000273048 DNAH5Q8TE73 4624 aa13.63□□□□□ -0.23
RETREG2-201ENST00000273048 IGKV2-30P06310 120 aa13.61□□□□□ -0.23
RETREG2-201ENST00000273048 LY6G6CO95867 125 aa13.59□□□□□ -0.23
RETREG2-201ENST00000273048 KRTAP13-2Q52LG2 175 aa13.59□□□□□ -0.23
RETREG2-201ENST00000273048 A0A1B0GU69 56 aa13.58□□□□□ -0.23
RETREG2-201ENST00000273048 KRTAP16-1A8MUX0 517 aa13.53□□□□□ -0.24
RETREG2-201ENST00000273048 KRTAP10-2P60368 255 aa13.52□□□□□ -0.24
RETREG2-201ENST00000273048 LRP1BQ9NZR2 4599 aa13.5□□□□□ -0.25
RETREG2-201ENST00000273048 IGKV2D-30A0A075B6S6 120 aa13.5□□□□□ -0.25
RETREG2-201ENST00000273048 PRAC1Q96KF2 57 aa13.48□□□□□ -0.25
RETREG2-201ENST00000273048 ADM2Q7Z4H4 148 aa13.45□□□□□ -0.26
RETREG2-201ENST00000273048 SPATA8Q6RVD6 105 aa13.43□□□□□ -0.26
RETREG2-201ENST00000273048 HYDINQ4G0P3 5121 aa13.41□□□□□ -0.26
RETREG2-201ENST00000273048 MIR22HGQ0VDD5 57 aa13.38□□□□□ -0.27
RETREG2-201ENST00000273048 UQCR11O14957 56 aa13.35□□□□□ -0.27
RETREG2-201ENST00000273048 PKD1P98161 4303 aa13.35□□□□□ -0.27
RETREG2-201ENST00000273048 KRTAP1-4P0C5Y4 121 aa13.34□□□□□ -0.27
RETREG2-201ENST00000273048 VPS13BQ7Z7G8 4022 aa13.34□□□□□ -0.27
RETREG2-201ENST00000273048 KRTAP10-1P60331 282 aa13.33□□□□□ -0.28
RETREG2-201ENST00000273048 PLA2G1BP04054 148 aaKnown RBP13.31□□□□□ -0.28
RETREG2-201ENST00000273048 FAT2Q9NYQ8 4349 aa13.31□□□□□ -0.28
RETREG2-201ENST00000273048 SPINK1P00995 79 aa13.26□□□□□ -0.29
RETREG2-201ENST00000273048 Q6ZSA8 131 aa13.26□□□□□ -0.29
RETREG2-201ENST00000273048 Q8N1X5 172 aa13.23□□□□□ -0.29
RETREG2-201ENST00000273048 C4orf48Q5BLP8 95 aa13.21□□□□□ -0.29
RETREG2-201ENST00000273048 KRTAP21-3Q3LHN1 58 aa13.18□□□□□ -0.3
RETREG2-201ENST00000273048 TYMSOSQ8TAI1 123 aa13.18□□□□□ -0.3
RETREG2-201ENST00000273048 PKHD1P08F94 4074 aa13.08□□□□□ -0.32
RETREG2-201ENST00000273048 LINC01554Q52M75 96 aa13.04□□□□□ -0.32
RETREG2-201ENST00000273048 CSAG1Q6PB30 78 aa13□□□□□ -0.33
RETREG2-201ENST00000273048 LINC00304Q8N9R0 145 aa12.97□□□□□ -0.33
RETREG2-201ENST00000273048 SACSQ9NZJ4 4579 aa12.93□□□□□ -0.34
RETREG2-201ENST00000273048 C9orf92A6NGG3 77 aa12.93□□□□□ -0.34
RETREG2-201ENST00000273048 H0YAA0 97 aa12.91□□□□□ -0.34
RETREG2-201ENST00000273048 KRTAP3-1Q9BYR8 98 aa12.86□□□□□ -0.35
RETREG2-201ENST00000273048 RPS29P62273 56 aaKnown RBP12.82□□□□□ -0.36
RETREG2-201ENST00000273048 A8MUU9 505 aa12.78□□□□□ -0.36
RETREG2-201ENST00000273048 SMR3BP02814 79 aaPredicted RBP12.78□□□□□ -0.36
RETREG2-201ENST00000273048 DYNC1H1Q14204 4646 aaKnown RBP12.78□□□□□ -0.36
RETREG2-201ENST00000273048 C20orf166-AS1Q96NR2 134 aa12.78□□□□□ -0.36
RETREG2-201ENST00000273048 A0A1B0GU33 70 aa12.76□□□□□ -0.37
RETREG2-201ENST00000273048 FAT1Q14517 4588 aa12.73□□□□□ -0.37
RETREG2-201ENST00000273048 PKHD1L1Q86WI1 4243 aa12.71□□□□□ -0.38
RETREG2-201ENST00000273048 H1FX-AS1Q4G0G2 97 aa12.69□□□□□ -0.38
RETREG2-201ENST00000273048 APOBP04114 4563 aaKnown RBP12.63□□□□□ -0.39
RETREG2-201ENST00000273048 FLG2Q5D862 2391 aaPredicted RBP12.56□□□□□ -0.4
RETREG2-201ENST00000273048 KRTAP25-1Q3LHN0 102 aa12.55□□□□□ -0.4
RETREG2-201ENST00000273048 A0A1B0GVY2 172 aa12.54□□□□□ -0.4
RETREG2-201ENST00000273048 COX6B2Q6YFQ2 88 aa12.51□□□□□ -0.41
RETREG2-201ENST00000273048 KRTAP10-4P60372 401 aaPredicted RBP12.49□□□□□ -0.41
RETREG2-201ENST00000273048 KMT2CQ8NEZ4 4911 aaKnown RBP12.48□□□□□ -0.41
RETREG2-201ENST00000273048 RYR2Q92736 4967 aa12.47□□□□□ -0.41
RETREG2-201ENST00000273048 CRIPTQ9P021 101 aa12.46□□□□□ -0.41
RETREG2-201ENST00000273048 K7ERS5 55 aa12.37□□□□□ -0.43
RETREG2-201ENST00000273048 H3BS24 57 aa12.33□□□□□ -0.44
RETREG2-201ENST00000273048 FAT3Q8TDW7 4589 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms