RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
RTN1-201ENST00000267484 Q6ZR54 194 aa10.04□□□□□ -0.8
RTN1-201ENST00000267484 MRPL34Q9BQ48 92 aaKnown RBP10.04□□□□□ -0.8
RTN1-201ENST00000267484 VPS13DQ5THJ4 4388 aa10.03□□□□□ -0.8
RTN1-201ENST00000267484 DNAH2Q9P225 4427 aa10.03□□□□□ -0.8
RTN1-201ENST00000267484 A6NED7 52 aa10.02□□□□□ -0.81
RTN1-201ENST00000267484 DNAH17Q9UFH2 4485 aa10.02□□□□□ -0.81
RTN1-201ENST00000267484 NUPR2A6NF83 97 aa10.02□□□□□ -0.81
RTN1-201ENST00000267484 LCA10Q71F78 164 aa10.02□□□□□ -0.81
RTN1-201ENST00000267484 MEGF8Q7Z7M0 2845 aa10□□□□□ -0.81
RTN1-201ENST00000267484 ZNF861PO60384 105 aa10□□□□□ -0.81
RTN1-201ENST00000267484 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
RTN1-201ENST00000267484 HRES1P13985 223 aa10□□□□□ -0.81
RTN1-201ENST00000267484 Q5W150 140 aa10□□□□□ -0.81
RTN1-201ENST00000267484 FBN3Q75N90 2809 aa10□□□□□ -0.81
RTN1-201ENST00000267484 PRKDCP78527 4128 aaKnown RBP9.99□□□□□ -0.81
RTN1-201ENST00000267484 CIRBP-AS1Q8TBR5 109 aa9.98□□□□□ -0.81
RTN1-201ENST00000267484 Q75L30 129 aa9.97□□□□□ -0.81
RTN1-201ENST00000267484 LOC101927531A0A1B0GV80 90 aa9.95□□□□□ -0.82
RTN1-201ENST00000267484 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
RTN1-201ENST00000267484 PRR26Q8N8Z3 221 aa9.92□□□□□ -0.82
RTN1-201ENST00000267484 RETNLBQ9BQ08 111 aa9.92□□□□□ -0.82
RTN1-201ENST00000267484 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
RTN1-201ENST00000267484 LINC01558Q9Y6Z2 57 aa9.89□□□□□ -0.83
RTN1-201ENST00000267484 SPINK7P58062 85 aa9.89□□□□□ -0.83
RTN1-201ENST00000267484 IGLV7-43P04211 117 aa9.87□□□□□ -0.83
RTN1-201ENST00000267484 ALMS1Q8TCU4 4167 aa9.86□□□□□ -0.83
RTN1-201ENST00000267484 KRTAP13-3Q3SY46 172 aa9.85□□□□□ -0.83
RTN1-201ENST00000267484 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
RTN1-201ENST00000267484 ATP11AUNQ6ZP68 121 aa9.82□□□□□ -0.84
RTN1-201ENST00000267484 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
RTN1-201ENST00000267484 C1orf134Q5TEV5 83 aa9.79□□□□□ -0.84
RTN1-201ENST00000267484 A6NN06 94 aa9.76□□□□□ -0.85
RTN1-201ENST00000267484 LY6G6CO95867 125 aa9.76□□□□□ -0.85
RTN1-201ENST00000267484 DNAH5Q8TE73 4624 aa9.75□□□□□ -0.85
RTN1-201ENST00000267484 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
RTN1-201ENST00000267484 KTN1-AS1Q86SY8 53 aa9.75□□□□□ -0.85
RTN1-201ENST00000267484 LINC00313P59037 77 aa9.73□□□□□ -0.85
RTN1-201ENST00000267484 ACYP2P14621 99 aa9.72□□□□□ -0.85
RTN1-201ENST00000267484 LRP1BQ9NZR2 4599 aa9.71□□□□□ -0.85
RTN1-201ENST00000267484 KRTAP13-2Q52LG2 175 aa9.71□□□□□ -0.85
RTN1-201ENST00000267484 SSBP3-AS1Q7Z2R9 100 aa9.7□□□□□ -0.86
RTN1-201ENST00000267484 C8orf87E5RJ46 101 aa9.68□□□□□ -0.86
RTN1-201ENST00000267484 DMAC1Q96GE9 116 aa9.66□□□□□ -0.86
RTN1-201ENST00000267484 DNHD1Q96M86 4753 aa9.64□□□□□ -0.87
RTN1-201ENST00000267484 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
RTN1-201ENST00000267484 RBM12B-AS1Q9P1G2 102 aa9.64□□□□□ -0.87
RTN1-201ENST00000267484 IGKV2D-30A0A075B6S6 120 aa9.62□□□□□ -0.87
RTN1-201ENST00000267484 IGKV2-30P06310 120 aa9.62□□□□□ -0.87
RTN1-201ENST00000267484 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
RTN1-201ENST00000267484 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
RTN1-201ENST00000267484 KRTAP16-1A8MUX0 517 aa9.59□□□□□ -0.87
RTN1-201ENST00000267484 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
RTN1-201ENST00000267484 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
RTN1-201ENST00000267484 HYDINQ4G0P3 5121 aa9.57□□□□□ -0.88
RTN1-201ENST00000267484 A0A1B0GU69 56 aa9.57□□□□□ -0.88
RTN1-201ENST00000267484 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
RTN1-201ENST00000267484 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
RTN1-201ENST00000267484 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
RTN1-201ENST00000267484 PKD1P98161 4303 aa9.53□□□□□ -0.88
RTN1-201ENST00000267484 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
RTN1-201ENST00000267484 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
RTN1-201ENST00000267484 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
RTN1-201ENST00000267484 SPINK1P00995 79 aa9.47□□□□□ -0.89
RTN1-201ENST00000267484 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
RTN1-201ENST00000267484 Q6ZSA8 131 aa9.46□□□□□ -0.89
RTN1-201ENST00000267484 Q8N1X5 172 aa9.44□□□□□ -0.9
RTN1-201ENST00000267484 TYMSOSQ8TAI1 123 aa9.43□□□□□ -0.9
RTN1-201ENST00000267484 MIR22HGQ0VDD5 57 aa9.41□□□□□ -0.9
RTN1-201ENST00000267484 SPATA8Q6RVD6 105 aa9.4□□□□□ -0.9
RTN1-201ENST00000267484 PKHD1P08F94 4074 aa9.38□□□□□ -0.91
RTN1-201ENST00000267484 UQCR11O14957 56 aa9.37□□□□□ -0.91
RTN1-201ENST00000267484 C9orf92A6NGG3 77 aa9.3□□□□□ -0.92
RTN1-201ENST00000267484 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
RTN1-201ENST00000267484 LINC00304Q8N9R0 145 aa9.27□□□□□ -0.93
RTN1-201ENST00000267484 FAT1Q14517 4588 aa9.23□□□□□ -0.93
RTN1-201ENST00000267484 H3BS24 57 aa9.21□□□□□ -0.93
RTN1-201ENST00000267484 CRIPTQ9P021 101 aa9.15□□□□□ -0.94
RTN1-201ENST00000267484 DYNC1H1Q14204 4646 aaKnown RBP9.15□□□□□ -0.95
RTN1-201ENST00000267484 SACSQ9NZJ4 4579 aa9.14□□□□□ -0.95
RTN1-201ENST00000267484 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
RTN1-201ENST00000267484 CSAG1Q6PB30 78 aa9.14□□□□□ -0.95
RTN1-201ENST00000267484 KRTAP21-3Q3LHN1 58 aa9.12□□□□□ -0.95
RTN1-201ENST00000267484 H0YAA0 97 aa9.11□□□□□ -0.95
RTN1-201ENST00000267484 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
RTN1-201ENST00000267484 A8MUU9 505 aa9.06□□□□□ -0.96
RTN1-201ENST00000267484 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
RTN1-201ENST00000267484 RPS29P62273 56 aaKnown RBP9.05□□□□□ -0.96
RTN1-201ENST00000267484 A0A1B0GU33 70 aa9.01□□□□□ -0.97
RTN1-201ENST00000267484 PKHD1L1Q86WI1 4243 aa9□□□□□ -0.97
RTN1-201ENST00000267484 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
RTN1-201ENST00000267484 KRTAP10-4P60372 401 aaPredicted RBP8.95□□□□□ -0.98
RTN1-201ENST00000267484 H1FX-AS1Q4G0G2 97 aa8.95□□□□□ -0.98
RTN1-201ENST00000267484 LRP1Q07954 4544 aaKnown RBP8.9□□□□□ -0.98
RTN1-201ENST00000267484 COX6B2Q6YFQ2 88 aa8.86□□□□□ -0.99
RTN1-201ENST00000267484 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
RTN1-201ENST00000267484 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
RTN1-201ENST00000267484 HSPG2P98160 4391 aa8.81□□□□□ -1
RTN1-201ENST00000267484 FAT3Q8TDW7 4589 aa8.79□□□□□ -1
RTN1-201ENST00000267484 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms